RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 NEXNQ0ZGT2 675 aa7.71□□□□□ -1.18
VPS13B-205ENST00000493587 ARMCX5Q6P1M9 558 aa7.71□□□□□ -1.18
VPS13B-205ENST00000493587 SARM1Q6SZW1 724 aa7.71□□□□□ -1.18
VPS13B-205ENST00000493587 DZIP3Q86Y13 1208 aaKnown RBP7.71□□□□□ -1.18
VPS13B-205ENST00000493587 MAB21L3Q8N8X9 362 aa7.71□□□□□ -1.18
VPS13B-205ENST00000493587 CUL5Q93034 780 aa7.71□□□□□ -1.18
VPS13B-205ENST00000493587 IQSEC3Q9UPP2 1182 aaPredicted RBP7.71□□□□□ -1.18
VPS13B-205ENST00000493587 CDHR2Q9BYE9 1310 aa7.71□□□□□ -1.18
VPS13B-205ENST00000493587 MEGF6O75095 1541 aa7.71□□□□□ -1.18
VPS13B-205ENST00000493587 hCG_2014768A0A024R1R8 64 aa7.71□□□□□ -1.18
VPS13B-205ENST00000493587 FAM83GA6ND36 823 aa7.71□□□□□ -1.18
VPS13B-205ENST00000493587 RNF8O76064 485 aa7.71□□□□□ -1.18
VPS13B-205ENST00000493587 XBP1P17861 261 aa7.71□□□□□ -1.18
VPS13B-205ENST00000493587 CCDC57Q2TAC2 916 aa7.71□□□□□ -1.18
VPS13B-205ENST00000493587 LARP1BQ659C4 914 aaKnown RBP7.71□□□□□ -1.18
VPS13B-205ENST00000493587 CCDC73Q6ZRK6 1079 aa7.71□□□□□ -1.18
VPS13B-205ENST00000493587 HNRNPLLQ8WVV9 542 aaKnown RBP7.71□□□□□ -1.18
VPS13B-205ENST00000493587 EYA1Q99502 592 aa7.71□□□□□ -1.18
VPS13B-205ENST00000493587 NUB1Q9Y5A7 615 aa7.71□□□□□ -1.18
VPS13B-205ENST00000493587 TNS2Q63HR2 1409 aa7.7□□□□□ -1.18
VPS13B-205ENST00000493587 CPDO75976 1380 aa7.7□□□□□ -1.18
VPS13B-205ENST00000493587 IPO5O00410 1097 aaKnown RBP7.7□□□□□ -1.18
VPS13B-205ENST00000493587 NR1I2O75469 434 aa7.7□□□□□ -1.18
VPS13B-205ENST00000493587 SERPINC1P01008 464 aa7.7□□□□□ -1.18
VPS13B-205ENST00000493587 CLTAP09496 248 aa7.7□□□□□ -1.18
VPS13B-205ENST00000493587 ZNF24P17028 368 aa7.7□□□□□ -1.18
VPS13B-205ENST00000493587 CYP11B2P19099 503 aa7.7□□□□□ -1.18
VPS13B-205ENST00000493587 GGCXP38435 758 aa7.7□□□□□ -1.18
VPS13B-205ENST00000493587 GOLGA8FQ08AF8 430 aa7.7□□□□□ -1.18
VPS13B-205ENST00000493587 GOLGA8DPQ0D2H9 430 aa7.7□□□□□ -1.18
VPS13B-205ENST00000493587 MAP7D1Q3KQU3 841 aa7.7□□□□□ -1.18
VPS13B-205ENST00000493587 CFAP100Q494V2 611 aa7.7□□□□□ -1.18
VPS13B-205ENST00000493587 CCDC80Q76M96 950 aa7.7□□□□□ -1.18
VPS13B-205ENST00000493587 LRP10Q7Z4F1 713 aa7.7□□□□□ -1.18
VPS13B-205ENST00000493587 STK11IPQ8N1F8 1099 aa7.7□□□□□ -1.18
VPS13B-205ENST00000493587 CCDC148Q8NFR7 591 aa7.7□□□□□ -1.18
VPS13B-205ENST00000493587 RASSF8Q8NHQ8 419 aa7.7□□□□□ -1.18
VPS13B-205ENST00000493587 TEKT4Q8WW24 435 aa7.7□□□□□ -1.18
VPS13B-205ENST00000493587 SDF4Q9BRK5 362 aa7.7□□□□□ -1.18
VPS13B-205ENST00000493587 LZTFL1Q9NQ48 299 aa7.7□□□□□ -1.18
VPS13B-205ENST00000493587 PALD1Q9ULE6 856 aa7.7□□□□□ -1.18
VPS13B-205ENST00000493587 PPFIA3O75145 1194 aa7.7□□□□□ -1.18
VPS13B-205ENST00000493587 IFIT2P09913 472 aaKnown RBP7.7□□□□□ -1.18
VPS13B-205ENST00000493587 GCLCP48506 637 aaPredicted RBP7.7□□□□□ -1.18
VPS13B-205ENST00000493587 IFFO1Q0D2I5 559 aa7.7□□□□□ -1.18
VPS13B-205ENST00000493587 PPP1R7Q15435 360 aa7.7□□□□□ -1.18
VPS13B-205ENST00000493587 SFMBT2Q5VUG0 894 aa7.7□□□□□ -1.18
VPS13B-205ENST00000493587 GALNT17Q6IS24 598 aa7.7□□□□□ -1.18
VPS13B-205ENST00000493587 HIBCHQ6NVY1 386 aaPredicted RBP7.7□□□□□ -1.18
VPS13B-205ENST00000493587 OTUD7AQ8TE49 926 aaPredicted RBP7.7□□□□□ -1.18
VPS13B-205ENST00000493587 OSBPL1AQ9BXW6 950 aa7.7□□□□□ -1.18
VPS13B-205ENST00000493587 POLD4Q9HCU8 107 aa7.7□□□□□ -1.18
VPS13B-205ENST00000493587 MAPK8IP1Q9UQF2 711 aa7.7□□□□□ -1.18
VPS13B-205ENST00000493587 PPP2R2CQ9Y2T4 447 aa7.7□□□□□ -1.18
VPS13B-205ENST00000493587 NUP98P52948 1817 aa7.7□□□□□ -1.18
VPS13B-205ENST00000493587 RPAP1Q9BWH6 1393 aaPredicted RBP7.7□□□□□ -1.18
VPS13B-205ENST00000493587 CCDC175P0C221 793 aa7.69□□□□□ -1.18
VPS13B-205ENST00000493587 CHMLP26374 656 aa7.69□□□□□ -1.18
VPS13B-205ENST00000493587 MTHFSDQ2M296 383 aaKnown RBP7.69□□□□□ -1.18
VPS13B-205ENST00000493587 TRIM65Q6PJ69 517 aa7.69□□□□□ -1.18
VPS13B-205ENST00000493587 CDC37L1Q7L3B6 337 aa7.69□□□□□ -1.18
VPS13B-205ENST00000493587 SCAND2PQ9GZW5 306 aaPredicted RBP7.69□□□□□ -1.18
VPS13B-205ENST00000493587 SUN2Q9UH99 717 aa7.69□□□□□ -1.18
VPS13B-205ENST00000493587 AKAP11Q9UKA4 1901 aa7.69□□□□□ -1.18
VPS13B-205ENST00000493587 DOT1LQ8TEK3 1739 aa7.69□□□□□ -1.18
VPS13B-205ENST00000493587 KIF5CO60282 957 aa7.69□□□□□ -1.18
VPS13B-205ENST00000493587 E2F6O75461 281 aa7.69□□□□□ -1.18
VPS13B-205ENST00000493587 VCAM1P19320 739 aa7.69□□□□□ -1.18
VPS13B-205ENST00000493587 PSME1Q06323 249 aa7.69□□□□□ -1.18
VPS13B-205ENST00000493587 TCERG1LQ5VWI1 586 aa7.69□□□□□ -1.18
VPS13B-205ENST00000493587 TLDC1Q6P9B6 456 aa7.69□□□□□ -1.18
VPS13B-205ENST00000493587 CEP128Q6ZU80 1094 aa7.69□□□□□ -1.18
VPS13B-205ENST00000493587 FUKQ8N0W3 1084 aa7.69□□□□□ -1.18
VPS13B-205ENST00000493587 RABL2BQ9UNT1 228 aa7.69□□□□□ -1.18
VPS13B-205ENST00000493587 FRMD4BQ9Y2L6 1034 aa7.69□□□□□ -1.18
VPS13B-205ENST00000493587 BZW2Q9Y6E2 419 aaKnown RBP7.69□□□□□ -1.18
VPS13B-205ENST00000493587 NPHP3Q7Z494 1330 aa7.69□□□□□ -1.18
VPS13B-205ENST00000493587 B4DLN1 442 aa7.69□□□□□ -1.18
VPS13B-205ENST00000493587 DIAPH2O60879 1101 aa7.69□□□□□ -1.18
VPS13B-205ENST00000493587 TOP1P11387 765 aaKnown RBP7.69□□□□□ -1.18
VPS13B-205ENST00000493587 NANOGNBQ7Z5D8 188 aa7.69□□□□□ -1.18
VPS13B-205ENST00000493587 OSBPL5Q9H0X9 879 aaPredicted RBP7.69□□□□□ -1.18
VPS13B-205ENST00000493587 ANKZF1Q9H8Y5 726 aa7.69□□□□□ -1.18
VPS13B-205ENST00000493587 HELLSQ9NRZ9 838 aa7.69□□□□□ -1.18
VPS13B-205ENST00000493587 PAIP2BQ9ULR5 123 aaKnown RBP7.69□□□□□ -1.18
VPS13B-205ENST00000493587 CORO1CQ9ULV4 474 aaPredicted RBP7.69□□□□□ -1.18
VPS13B-205ENST00000493587 OPLAHO14841 1288 aa7.68□□□□□ -1.18
VPS13B-205ENST00000493587 CUTAO60888 179 aa7.68□□□□□ -1.18
VPS13B-205ENST00000493587 ANP32DO95626 131 aa7.68□□□□□ -1.18
VPS13B-205ENST00000493587 EIF4BP23588 611 aaKnown RBP7.68□□□□□ -1.18
VPS13B-205ENST00000493587 LMOD1P29536 600 aaPredicted RBP7.68□□□□□ -1.18
VPS13B-205ENST00000493587 TTLL7Q6ZT98 887 aa7.68□□□□□ -1.18
VPS13B-205ENST00000493587 NGDNQ8NEJ9 315 aaKnown RBP7.68□□□□□ -1.18
VPS13B-205ENST00000493587 DDX27Q96GQ7 796 aaKnown RBP7.68□□□□□ -1.18
VPS13B-205ENST00000493587 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.68□□□□□ -1.18
VPS13B-205ENST00000493587 NLRP2Q9NX02 1062 aa7.68□□□□□ -1.18
VPS13B-205ENST00000493587 COL24A1Q17RW2 1714 aa7.68□□□□□ -1.18
VPS13B-205ENST00000493587 SBF2Q86WG5 1849 aa7.68□□□□□ -1.18
VPS13B-205ENST00000493587 MAP3K5Q99683 1374 aa7.68□□□□□ -1.18
VPS13B-205ENST00000493587 RASSF10A6NK89 507 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms