RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 MYH8P13535 1937 aa13.18□□□□□ -0.3
HDAC4-210ENST00000493582 PSMD14O00487 310 aa13.18□□□□□ -0.3
HDAC4-210ENST00000493582 RNMTO43148 476 aaKnown RBP13.18□□□□□ -0.3
HDAC4-210ENST00000493582 PTPREP23469 700 aa13.18□□□□□ -0.3
HDAC4-210ENST00000493582 RDXP35241 583 aaKnown RBP13.18□□□□□ -0.3
HDAC4-210ENST00000493582 DDR1Q08345 913 aa13.18□□□□□ -0.3
HDAC4-210ENST00000493582 CUL4BQ13620 913 aa13.18□□□□□ -0.3
HDAC4-210ENST00000493582 CCDC122Q5T0U0 273 aa13.18□□□□□ -0.3
HDAC4-210ENST00000493582 ELOA2Q8IYF1 753 aaPredicted RBP13.18□□□□□ -0.3
HDAC4-210ENST00000493582 SH2D3CQ8N5H7 860 aa13.18□□□□□ -0.3
HDAC4-210ENST00000493582 XAGE2Q96GT9 111 aa13.18□□□□□ -0.3
HDAC4-210ENST00000493582 ACTN3Q08043 901 aaPredicted RBP13.17□□□□□ -0.3
HDAC4-210ENST00000493582 PPP2R5AQ15172 486 aa13.17□□□□□ -0.3
HDAC4-210ENST00000493582 AKAP4Q5JQC9 854 aa13.17□□□□□ -0.3
HDAC4-210ENST00000493582 LMBR1LQ6UX01 489 aa13.17□□□□□ -0.3
HDAC4-210ENST00000493582 SPATA20Q8TB22 786 aa13.17□□□□□ -0.3
HDAC4-210ENST00000493582 N4BP2L2Q92802 583 aaPredicted RBP13.17□□□□□ -0.3
HDAC4-210ENST00000493582 KCNJ14Q9UNX9 436 aa13.17□□□□□ -0.3
HDAC4-210ENST00000493582 PCDHB6Q9Y5E3 794 aa13.17□□□□□ -0.3
HDAC4-210ENST00000493582 PTPRUQ92729 1446 aa13.17□□□□□ -0.3
HDAC4-210ENST00000493582 ZNF213O14771 459 aa13.17□□□□□ -0.3
HDAC4-210ENST00000493582 RANBP6O60518 1105 aaKnown RBP13.17□□□□□ -0.3
HDAC4-210ENST00000493582 ELF1P32519 619 aa13.17□□□□□ -0.3
HDAC4-210ENST00000493582 IARSP41252 1262 aaKnown RBP13.17□□□□□ -0.3
HDAC4-210ENST00000493582 NEDD9Q14511 834 aa13.17□□□□□ -0.3
HDAC4-210ENST00000493582 KRT31Q15323 416 aa13.17□□□□□ -0.3
HDAC4-210ENST00000493582 TTMPQ5BVD1 217 aa13.17□□□□□ -0.3
HDAC4-210ENST00000493582 RNF187Q5TA31 235 aaPredicted RBP13.17□□□□□ -0.3
HDAC4-210ENST00000493582 B4GALNT4Q76KP1 1039 aa13.17□□□□□ -0.3
HDAC4-210ENST00000493582 NOSTRINQ8IVI9 506 aa13.17□□□□□ -0.3
HDAC4-210ENST00000493582 AENQ8WTP8 325 aaKnown RBP13.17□□□□□ -0.3
HDAC4-210ENST00000493582 STAMQ92783 540 aa13.17□□□□□ -0.3
HDAC4-210ENST00000493582 AIDAQ96BJ3 306 aa13.17□□□□□ -0.3
HDAC4-210ENST00000493582 A1CFQ9NQ94 594 aaKnown RBP13.17□□□□□ -0.3
HDAC4-210ENST00000493582 FAM184BQ9ULE4 1060 aa13.17□□□□□ -0.3
HDAC4-210ENST00000493582 SETD1BQ9UPS6 1966 aaKnown RBP13.17□□□□□ -0.3
HDAC4-210ENST00000493582 CHUKO15111 745 aa13.16□□□□□ -0.3
HDAC4-210ENST00000493582 FSBPO95073 299 aa13.16□□□□□ -0.3
HDAC4-210ENST00000493582 DPYDQ12882 1025 aa13.16□□□□□ -0.3
HDAC4-210ENST00000493582 METTL22Q9BUU2 404 aaPredicted RBP13.16□□□□□ -0.3
HDAC4-210ENST00000493582 TAB2Q9NYJ8 693 aa13.16□□□□□ -0.3
HDAC4-210ENST00000493582 DMGDHQ9UI17 866 aaKnown RBP13.16□□□□□ -0.3
HDAC4-210ENST00000493582 SLC7A5Q01650 507 aa13.16□□□□□ -0.3
HDAC4-210ENST00000493582 SATB1Q01826 763 aa13.16□□□□□ -0.3
HDAC4-210ENST00000493582 SLC39A6Q13433 755 aa13.16□□□□□ -0.3
HDAC4-210ENST00000493582 PAPD7Q5XG87 772 aaKnown RBP13.16□□□□□ -0.3
HDAC4-210ENST00000493582 MIEF2Q96C03 454 aa13.16□□□□□ -0.3
HDAC4-210ENST00000493582 CSRNP2Q9H175 543 aa13.16□□□□□ -0.3
HDAC4-210ENST00000493582 JADE2Q9NQC1 790 aa13.16□□□□□ -0.3
HDAC4-210ENST00000493582 ANGEL1Q9UNK9 670 aaKnown RBP13.16□□□□□ -0.3
HDAC4-210ENST00000493582 A0A087WZG4 1122 aa13.16□□□□□ -0.3
HDAC4-210ENST00000493582 A0A087X0B3 334 aa13.16□□□□□ -0.3
HDAC4-210ENST00000493582 MATR3P43243 847 aaKnown RBP eCLIP13.16□□□□□ -0.32e-6■■■■□ 19.7
HDAC4-210ENST00000493582 PPARAQ07869 468 aa13.16□□□□□ -0.3
HDAC4-210ENST00000493582 CYB5R4Q7L1T6 521 aa13.16□□□□□ -0.3
HDAC4-210ENST00000493582 CCDC82Q8N4S0 544 aa13.16□□□□□ -0.3
HDAC4-210ENST00000493582 TSEN2Q8NCE0 465 aaKnown RBP13.16□□□□□ -0.3
HDAC4-210ENST00000493582 SLC26A6Q9BXS9 759 aa13.16□□□□□ -0.3
HDAC4-210ENST00000493582 PUS7LQ9H0K6 701 aaKnown RBP13.16□□□□□ -0.3
HDAC4-210ENST00000493582 KLC4Q9NSK0 619 aa13.16□□□□□ -0.3
HDAC4-210ENST00000493582 MCM8Q9UJA3 840 aa13.16□□□□□ -0.3
HDAC4-210ENST00000493582 DUSP10Q9Y6W6 482 aa13.16□□□□□ -0.3
HDAC4-210ENST00000493582 UBN2Q6ZU65 1347 aa13.15□□□□□ -0.3
HDAC4-210ENST00000493582 PPP1R3GB7ZBB8 358 aa13.15□□□□□ -0.3
HDAC4-210ENST00000493582 C21orf2O43822 256 aa13.15□□□□□ -0.3
HDAC4-210ENST00000493582 GUCY1A2P33402 732 aa13.15□□□□□ -0.3
HDAC4-210ENST00000493582 HERVK_113P62684 666 aa13.15□□□□□ -0.3
HDAC4-210ENST00000493582 PPARDQ03181 441 aa13.15□□□□□ -0.3
HDAC4-210ENST00000493582 APOA5Q6Q788 366 aa13.15□□□□□ -0.3
HDAC4-210ENST00000493582 AMOTL1Q8IY63 956 aa13.15□□□□□ -0.3
HDAC4-210ENST00000493582 STAG1Q8WVM7 1258 aa13.15□□□□□ -0.3
HDAC4-210ENST00000493582 EPSTI1Q96J88 318 aa13.15□□□□□ -0.3
HDAC4-210ENST00000493582 LRRC1Q9BTT6 524 aa13.15□□□□□ -0.3
HDAC4-210ENST00000493582 HAUS4Q9H6D7 363 aa13.15□□□□□ -0.3
HDAC4-210ENST00000493582 GOLGA8KD6RF30 607 aa13.15□□□□□ -0.3
HDAC4-210ENST00000493582 CDKL5O76039 1030 aa13.15□□□□□ -0.3
HDAC4-210ENST00000493582 BRD2P25440 801 aaKnown RBP13.15□□□□□ -0.3
HDAC4-210ENST00000493582 ATG9AQ7Z3C6 839 aa13.15□□□□□ -0.3
HDAC4-210ENST00000493582 ODF2LQ9ULJ1 636 aa13.15□□□□□ -0.3
HDAC4-210ENST00000493582 CTNND2Q9UQB3 1225 aa13.15□□□□□ -0.3
HDAC4-210ENST00000493582 KRT14P02533 472 aa13.14□□□□□ -0.31
HDAC4-210ENST00000493582 NF2P35240 595 aa13.14□□□□□ -0.31
HDAC4-210ENST00000493582 GUCY1A3Q02108 690 aa13.14□□□□□ -0.31
HDAC4-210ENST00000493582 NR5A1Q13285 461 aa13.14□□□□□ -0.31
HDAC4-210ENST00000493582 NTRK3Q16288 839 aa13.14□□□□□ -0.31
HDAC4-210ENST00000493582 RABL6Q3YEC7 729 aaPredicted RBP13.14□□□□□ -0.31
HDAC4-210ENST00000493582 C1orf141Q5JVX7 400 aa13.14□□□□□ -0.31
HDAC4-210ENST00000493582 ANKRD13DQ6ZTN6 518 aa13.14□□□□□ -0.31
HDAC4-210ENST00000493582 CEP57Q86XR8 500 aa13.14□□□□□ -0.31
HDAC4-210ENST00000493582 DIS3L2Q8IYB7 885 aaKnown RBP13.14□□□□□ -0.31
HDAC4-210ENST00000493582 LACRTQ9GZZ8 138 aa13.14□□□□□ -0.31
HDAC4-210ENST00000493582 ITIH6Q6UXX5 1313 aa13.14□□□□□ -0.31
HDAC4-210ENST00000493582 RCCD1A6NED2 376 aa13.14□□□□□ -0.31
HDAC4-210ENST00000493582 PAX7P23759 505 aa13.14□□□□□ -0.31
HDAC4-210ENST00000493582 SEC24CP53992 1094 aa13.14□□□□□ -0.31
HDAC4-210ENST00000493582 CKAP4Q07065 602 aaKnown RBP13.14□□□□□ -0.31
HDAC4-210ENST00000493582 KANK3Q6NY19 840 aa13.14□□□□□ -0.31
HDAC4-210ENST00000493582 RPGRIP1Q96KN7 1286 aa13.14□□□□□ -0.31
HDAC4-210ENST00000493582 VEZTQ9HBM0 779 aa13.14□□□□□ -0.31
HDAC4-210ENST00000493582 SLIT1O75093 1534 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms