RNA–Protein interactions for RNA: ENST00000493358.1

SNED1-212, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 578 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-212ENST00000493358 USP17L19D6RCP7 530 aa16.15■□□□□ 0.18
SNED1-212ENST00000493358 USP17L20D6RJB6 530 aa16.15■□□□□ 0.18
SNED1-212ENST00000493358 SGPL1O95470 568 aa16.15■□□□□ 0.18
SNED1-212ENST00000493358 TFRCP02786 760 aaKnown RBP16.15■□□□□ 0.18
SNED1-212ENST00000493358 ADD2P35612 726 aa16.15■□□□□ 0.18
SNED1-212ENST00000493358 CCNA1P78396 465 aa16.15■□□□□ 0.18
SNED1-212ENST00000493358 USP17L24Q0WX57 530 aa16.15■□□□□ 0.18
SNED1-212ENST00000493358 LCORLQ8N3X6 602 aa16.15■□□□□ 0.18
SNED1-212ENST00000493358 SDR42E1Q8WUS8 393 aa16.15■□□□□ 0.18
SNED1-212ENST00000493358 C12orf42Q96LP6 360 aa16.15■□□□□ 0.18
SNED1-212ENST00000493358 HAUS7Q99871 368 aa16.15■□□□□ 0.18
SNED1-212ENST00000493358 NUDT12Q9BQG2 462 aa16.15■□□□□ 0.18
SNED1-212ENST00000493358 ARMT1Q9H993 441 aa16.15■□□□□ 0.18
SNED1-212ENST00000493358 EMILIN3Q9NT22 766 aa16.15■□□□□ 0.18
SNED1-212ENST00000493358 SWAP70Q9UH65 585 aa16.15■□□□□ 0.18
SNED1-212ENST00000493358 ALPK3Q96L96 1907 aa16.15■□□□□ 0.18
SNED1-212ENST00000493358 MYH4Q9Y623 1939 aa16.15■□□□□ 0.18
SNED1-212ENST00000493358 ZNFX1Q9P2E3 1918 aaKnown RBP16.14■□□□□ 0.17
SNED1-212ENST00000493358 TCRBV5S4A2TA0A5A2 114 aa16.14■□□□□ 0.17
SNED1-212ENST00000493358 MBD4O95243 580 aa16.14■□□□□ 0.17
SNED1-212ENST00000493358 SHMT1P34896 483 aa16.14■□□□□ 0.17
SNED1-212ENST00000493358 PLCD1P51178 756 aa16.14■□□□□ 0.17
SNED1-212ENST00000493358 ERVK-9P63128 1117 aa16.14■□□□□ 0.17
SNED1-212ENST00000493358 ERVK-24P63145 666 aa16.14■□□□□ 0.17
SNED1-212ENST00000493358 C20orf194Q5TEA3 1177 aa16.14■□□□□ 0.17
SNED1-212ENST00000493358 EDC3Q96F86 508 aaKnown RBP16.14■□□□□ 0.17
SNED1-212ENST00000493358 DEFB118Q96PH6 123 aa16.14■□□□□ 0.17
SNED1-212ENST00000493358 KIAA1683Q9H0B3 1180 aa16.14■□□□□ 0.17
SNED1-212ENST00000493358 DCP1AQ9NPI6 582 aaPredicted RBP16.14■□□□□ 0.17
SNED1-212ENST00000493358 ATP8A2Q9NTI2 1148 aa16.14■□□□□ 0.17
SNED1-212ENST00000493358 COL11A1P12107 1806 aaPredicted RBP16.14■□□□□ 0.17
SNED1-212ENST00000493358 GLRX3O76003 335 aaKnown RBP16.13■□□□□ 0.17
SNED1-212ENST00000493358 TRMT44Q8IYL2 757 aaKnown RBP16.13■□□□□ 0.17
SNED1-212ENST00000493358 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.13■□□□□ 0.17
SNED1-212ENST00000493358 HMX1Q9NP08 348 aaPredicted RBP16.13■□□□□ 0.17
SNED1-212ENST00000493358 TRIOBPQ9H2D6 2365 aa16.13■□□□□ 0.17
SNED1-212ENST00000493358 A0A0G2JMZ2 1700 aa16.12■□□□□ 0.17
SNED1-212ENST00000493358 VCAM1P19320 739 aa16.12■□□□□ 0.17
SNED1-212ENST00000493358 CYP2B6P20813 491 aa16.12■□□□□ 0.17
SNED1-212ENST00000493358 RGS2P41220 211 aa16.12■□□□□ 0.17
SNED1-212ENST00000493358 SEPT2Q15019 361 aa16.12■□□□□ 0.17
SNED1-212ENST00000493358 UBE3CQ15386 1083 aa16.12■□□□□ 0.17
SNED1-212ENST00000493358 WDR78Q5VTH9 848 aa16.12■□□□□ 0.17
SNED1-212ENST00000493358 TMEM179Q6ZVK1 233 aa16.12■□□□□ 0.17
SNED1-212ENST00000493358 SH2D4AQ9H788 454 aa16.12■□□□□ 0.17
SNED1-212ENST00000493358 ARHGEF10LQ9HCE6 1279 aa16.12■□□□□ 0.17
SNED1-212ENST00000493358 TXNRD2Q9NNW7 524 aa16.12■□□□□ 0.17
SNED1-212ENST00000493358 PAK6Q9NQU5 681 aaPredicted RBP16.12■□□□□ 0.17
SNED1-212ENST00000493358 ECHDC1Q9NTX5 307 aa16.12■□□□□ 0.17
SNED1-212ENST00000493358 RABGAP1Q9Y3P9 1069 aa16.12■□□□□ 0.17
SNED1-212ENST00000493358 NR2E3Q9Y5X4 410 aa16.12■□□□□ 0.17
SNED1-212ENST00000493358 RLFQ13129 1914 aa16.11■□□□□ 0.17
SNED1-212ENST00000493358 SMARCA5O60264 1052 aaPredicted RBP16.11■□□□□ 0.17
SNED1-212ENST00000493358 ZKSCAN1P17029 563 aaPredicted RBP16.11■□□□□ 0.17
SNED1-212ENST00000493358 GABPAQ06546 454 aa16.11■□□□□ 0.17
SNED1-212ENST00000493358 HABP4Q5JVS0 413 aaKnown RBP16.11■□□□□ 0.17
SNED1-212ENST00000493358 PLEKHH3Q7Z736 793 aa16.11■□□□□ 0.17
SNED1-212ENST00000493358 ACER1Q8TDN7 264 aa16.11■□□□□ 0.17
SNED1-212ENST00000493358 RBPJLQ9UBG7 517 aa16.11■□□□□ 0.17
SNED1-212ENST00000493358 GJD2Q9UKL4 321 aa16.11■□□□□ 0.17
SNED1-212ENST00000493358 IVNS1ABPQ9Y6Y0 642 aa16.11■□□□□ 0.17
SNED1-212ENST00000493358 RPTORQ8N122 1335 aa16.11■□□□□ 0.17
SNED1-212ENST00000493358 H0YGN5 161 aa16.1■□□□□ 0.17
SNED1-212ENST00000493358 CATSPERGQ6ZRH7 1159 aa16.1■□□□□ 0.17
SNED1-212ENST00000493358 GPR142Q7Z601 462 aa16.1■□□□□ 0.17
SNED1-212ENST00000493358 TANGO6Q9C0B7 1094 aa16.1■□□□□ 0.17
SNED1-212ENST00000493358 RPAP3Q9H6T3 665 aaPredicted RBP16.1■□□□□ 0.17
SNED1-212ENST00000493358 SLC4A4Q9Y6R1 1079 aa16.1■□□□□ 0.17
SNED1-212ENST00000493358 ZNF236Q9UL36 1845 aa16.1■□□□□ 0.17
SNED1-212ENST00000493358 PLXNA1Q9UIW2 1896 aa16.1■□□□□ 0.17
SNED1-212ENST00000493358 PRKAB2O43741 272 aa16.09■□□□□ 0.17
SNED1-212ENST00000493358 PEX10O60683 326 aa16.09■□□□□ 0.17
SNED1-212ENST00000493358 CYP2D6P10635 497 aa16.09■□□□□ 0.17
SNED1-212ENST00000493358 XRCC5P13010 732 aaKnown RBP16.09■□□□□ 0.17
SNED1-212ENST00000493358 LRRFIP1Q32MZ4 808 aaKnown RBP16.09■□□□□ 0.17
SNED1-212ENST00000493358 TRIB2Q92519 343 aa16.09■□□□□ 0.17
SNED1-212ENST00000493358 CCDC17Q96LX7 622 aa16.09■□□□□ 0.17
SNED1-212ENST00000493358 APBA2Q99767 749 aa16.09■□□□□ 0.17
SNED1-212ENST00000493358 PORCNQ9H237 461 aa16.09■□□□□ 0.17
SNED1-212ENST00000493358 ZBTB47Q9UFB7 747 aaPredicted RBP16.09■□□□□ 0.17
SNED1-212ENST00000493358 GREB1LQ9C091 1923 aaPredicted RBP16.08■□□□□ 0.16
SNED1-212ENST00000493358 PRKAR2AP13861 404 aaKnown RBP16.08■□□□□ 0.16
SNED1-212ENST00000493358 GUCY1A2P33402 732 aa16.08■□□□□ 0.16
SNED1-212ENST00000493358 ICA1Q05084 483 aa16.08■□□□□ 0.16
SNED1-212ENST00000493358 LBX2Q6XYB7 198 aa16.08■□□□□ 0.16
SNED1-212ENST00000493358 NECAB2Q7Z6G3 386 aa16.08■□□□□ 0.16
SNED1-212ENST00000493358 UBE2Q1Q7Z7E8 422 aa16.08■□□□□ 0.16
SNED1-212ENST00000493358 ANKLE1Q8NAG6 615 aa16.08■□□□□ 0.16
SNED1-212ENST00000493358 SLC44A5Q8NCS7 719 aa16.08■□□□□ 0.16
SNED1-212ENST00000493358 DYNLL2Q96FJ2 89 aa16.08■□□□□ 0.16
SNED1-212ENST00000493358 DCTPP1Q9H773 170 aa16.08■□□□□ 0.16
SNED1-212ENST00000493358 ARPP21Q9UBL0 812 aaPredicted RBP16.08■□□□□ 0.16
SNED1-212ENST00000493358 SPDYE16A6NNV3 312 aaPredicted RBP16.07■□□□□ 0.16
SNED1-212ENST00000493358 USP17L12C9JPN9 530 aa16.07■□□□□ 0.16
SNED1-212ENST00000493358 USP17L21D6R901 530 aa16.07■□□□□ 0.16
SNED1-212ENST00000493358 EVI5O60447 810 aa16.07■□□□□ 0.16
SNED1-212ENST00000493358 Q3C1V9 767 aa16.07■□□□□ 0.16
SNED1-212ENST00000493358 SLFNL1Q499Z3 407 aa16.07■□□□□ 0.16
SNED1-212ENST00000493358 C12orf60Q5U649 245 aa16.07■□□□□ 0.16
SNED1-212ENST00000493358 LPAR1Q92633 364 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms