RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 FEZ1Q99689 392 aa26.22■■□□□ 1.79
PFDN4-205ENST00000493356 CWC22Q9HCG8 908 aaKnown RBP26.22■■□□□ 1.79
PFDN4-205ENST00000493356 TLR7Q9NYK1 1049 aaKnown RBP26.22■■□□□ 1.79
PFDN4-205ENST00000493356 USP17L15C9J2P7 530 aa26.21■■□□□ 1.79
PFDN4-205ENST00000493356 USP17L13C9JLJ4 530 aa26.21■■□□□ 1.79
PFDN4-205ENST00000493356 USP17L11C9JVI0 530 aa26.21■■□□□ 1.79
PFDN4-205ENST00000493356 USP17L18D6R9N7 530 aa26.21■■□□□ 1.79
PFDN4-205ENST00000493356 USP17L22D6RA61 530 aa26.21■■□□□ 1.79
PFDN4-205ENST00000493356 USP17L17D6RBQ6 530 aa26.21■■□□□ 1.79
PFDN4-205ENST00000493356 USP17L19D6RCP7 530 aa26.21■■□□□ 1.79
PFDN4-205ENST00000493356 USP17L20D6RJB6 530 aa26.21■■□□□ 1.79
PFDN4-205ENST00000493356 USP17L24Q0WX57 530 aa26.21■■□□□ 1.79
PFDN4-205ENST00000493356 MIGA1Q8NAN2 632 aa26.21■■□□□ 1.79
PFDN4-205ENST00000493356 IDH1O75874 414 aaKnown RBP26.2■■□□□ 1.78
PFDN4-205ENST00000493356 USP5P45974 858 aa26.2■■□□□ 1.78
PFDN4-205ENST00000493356 CCNA1P78396 465 aa26.2■■□□□ 1.78
PFDN4-205ENST00000493356 EDC3Q96F86 508 aaKnown RBP26.2■■□□□ 1.78
PFDN4-205ENST00000493356 EHD4Q9H223 541 aa26.2■■□□□ 1.78
PFDN4-205ENST00000493356 MTMR10Q9NXD2 777 aa26.2■■□□□ 1.78
PFDN4-205ENST00000493356 SERPINB13Q9UIV8 391 aa26.2■■□□□ 1.78
PFDN4-205ENST00000493356 STXBP5LQ9Y2K9 1186 aa26.2■■□□□ 1.78
PFDN4-205ENST00000493356 NOP58Q9Y2X3 529 aaKnown RBP26.2■■□□□ 1.78
PFDN4-205ENST00000493356 GLRX3O76003 335 aaKnown RBP26.19■■□□□ 1.78
PFDN4-205ENST00000493356 ZKSCAN2Q63HK3 967 aa26.19■■□□□ 1.78
PFDN4-205ENST00000493356 CATSPERGQ6ZRH7 1159 aa26.19■■□□□ 1.78
PFDN4-205ENST00000493356 CERS3Q8IU89 383 aa26.19■■□□□ 1.78
PFDN4-205ENST00000493356 KIAA1683Q9H0B3 1180 aa26.19■■□□□ 1.78
PFDN4-205ENST00000493356 CCDC8Q9H0W5 538 aaPredicted RBP26.19■■□□□ 1.78
PFDN4-205ENST00000493356 C1orf115Q9H7X2 142 aa26.19■■□□□ 1.78
PFDN4-205ENST00000493356 FLRT1Q9NZU1 646 aa26.19■■□□□ 1.78
PFDN4-205ENST00000493356 NDUFB9Q9Y6M9 179 aa26.19■■□□□ 1.78
PFDN4-205ENST00000493356 VCAM1P19320 739 aa26.18■■□□□ 1.78
PFDN4-205ENST00000493356 USP14P54578 494 aa26.18■■□□□ 1.78
PFDN4-205ENST00000493356 RAB3GAP1Q15042 981 aa26.18■■□□□ 1.78
PFDN4-205ENST00000493356 MAGEB6Q8N7X4 407 aa26.18■■□□□ 1.78
PFDN4-205ENST00000493356 EAF2Q96CJ1 260 aaPredicted RBP26.18■■□□□ 1.78
PFDN4-205ENST00000493356 SLC15A5A6NIM6 579 aa26.17■■□□□ 1.78
PFDN4-205ENST00000493356 PTPREP23469 700 aa26.17■■□□□ 1.78
PFDN4-205ENST00000493356 MDM2Q00987 491 aaPredicted RBP26.17■■□□□ 1.78
PFDN4-205ENST00000493356 WDR78Q5VTH9 848 aa26.17■■□□□ 1.78
PFDN4-205ENST00000493356 MFSD14CQ5VZR4 134 aa26.17■■□□□ 1.78
PFDN4-205ENST00000493356 ACER1Q8TDN7 264 aa26.17■■□□□ 1.78
PFDN4-205ENST00000493356 LAMA2P24043 3122 aaKnown RBP26.16■■□□□ 1.78
PFDN4-205ENST00000493356 ABCB5Q2M3G0 1257 aa26.16■■□□□ 1.78
PFDN4-205ENST00000493356 CERKLQ49MI3 558 aaPredicted RBP26.16■■□□□ 1.78
PFDN4-205ENST00000493356 LBX2Q6XYB7 198 aa26.16■■□□□ 1.78
PFDN4-205ENST00000493356 TTC6Q86TZ1 520 aa26.16■■□□□ 1.78
PFDN4-205ENST00000493356 BTBD7Q9P203 1132 aa26.16■■□□□ 1.78
PFDN4-205ENST00000493356 CCER2I3L3R5 266 aa26.15■■□□□ 1.78
PFDN4-205ENST00000493356 HOXC6P09630 235 aa26.15■■□□□ 1.78
PFDN4-205ENST00000493356 SHMT1P34896 483 aa26.14■■□□□ 1.78
PFDN4-205ENST00000493356 GRB14Q14449 540 aa26.14■■□□□ 1.78
PFDN4-205ENST00000493356 SENP6Q9GZR1 1112 aaPredicted RBP26.14■■□□□ 1.78
PFDN4-205ENST00000493356 ANTXR1Q9H6X2 564 aa26.14■■□□□ 1.78
PFDN4-205ENST00000493356 DDX20Q9UHI6 824 aaKnown RBP26.14■■□□□ 1.78
PFDN4-205ENST00000493356 IVNS1ABPQ9Y6Y0 642 aa26.14■■□□□ 1.78
PFDN4-205ENST00000493356 UNC80Q8N2C7 3258 aa26.13■■□□□ 1.77
PFDN4-205ENST00000493356 SPDYE16A6NNV3 312 aaPredicted RBP26.13■■□□□ 1.77
PFDN4-205ENST00000493356 MAP3K12Q12852 859 aa26.13■■□□□ 1.77
PFDN4-205ENST00000493356 NPLOC4Q8TAT6 608 aa26.13■■□□□ 1.77
PFDN4-205ENST00000493356 RPAP3Q9H6T3 665 aaPredicted RBP26.13■■□□□ 1.77
PFDN4-205ENST00000493356 CABP5Q9NP86 173 aa26.13■■□□□ 1.77
PFDN4-205ENST00000493356 MSCO60682 206 aa26.12■■□□□ 1.77
PFDN4-205ENST00000493356 PLCD1P51178 756 aa26.12■■□□□ 1.77
PFDN4-205ENST00000493356 ATP2B2Q01814 1243 aa26.12■■□□□ 1.77
PFDN4-205ENST00000493356 TMED8Q6PL24 325 aaPredicted RBP26.12■■□□□ 1.77
PFDN4-205ENST00000493356 LPAR1Q92633 364 aa26.12■■□□□ 1.77
PFDN4-205ENST00000493356 NAV1Q8NEY1 1877 aa26.12■■□□□ 1.77
PFDN4-205ENST00000493356 CNGA1P29973 690 aa26.11■■□□□ 1.77
PFDN4-205ENST00000493356 CYP2C19P33261 490 aa26.11■■□□□ 1.77
PFDN4-205ENST00000493356 GUCY1A2P33402 732 aa26.11■■□□□ 1.77
PFDN4-205ENST00000493356 RIOK1Q9BRS2 568 aaKnown RBP26.11■■□□□ 1.77
PFDN4-205ENST00000493356 ZNF236Q9UL36 1845 aa26.1■■□□□ 1.77
PFDN4-205ENST00000493356 IGHA2P01877 340 aa26.1■■□□□ 1.77
PFDN4-205ENST00000493356 TRPV1Q8NER1 839 aa26.1■■□□□ 1.77
PFDN4-205ENST00000493356 DNM1LO00429 736 aa26.09■■□□□ 1.77
PFDN4-205ENST00000493356 ATN1P54259 1190 aaPredicted RBP26.09■■□□□ 1.77
PFDN4-205ENST00000493356 SEPT2Q15019 361 aa26.09■■□□□ 1.77
PFDN4-205ENST00000493356 FTSJ3Q8IY81 847 aaKnown RBP26.09■■□□□ 1.77
PFDN4-205ENST00000493356 LBHD1Q9BQE6 289 aaPredicted RBP26.09■■□□□ 1.77
PFDN4-205ENST00000493356 CYBAP13498 195 aa26.08■■□□□ 1.77
PFDN4-205ENST00000493356 GABPAQ06546 454 aa26.08■■□□□ 1.77
PFDN4-205ENST00000493356 ITPRIPQ8IWB1 547 aa26.08■■□□□ 1.77
PFDN4-205ENST00000493356 LTBP2Q14767 1821 aa26.08■■□□□ 1.77
PFDN4-205ENST00000493356 A0A0G2JMZ2 1700 aa26.08■■□□□ 1.76
PFDN4-205ENST00000493356 RLFQ13129 1914 aa26.08■■□□□ 1.76
PFDN4-205ENST00000493356 POTEB2H3BUK9 544 aa26.07■■□□□ 1.76
PFDN4-205ENST00000493356 POLR3DP05423 398 aaPredicted RBP26.07■■□□□ 1.76
PFDN4-205ENST00000493356 RLBP1P12271 317 aa26.07■■□□□ 1.76
PFDN4-205ENST00000493356 FAM109BQ6ICB4 259 aaPredicted RBP26.07■■□□□ 1.76
PFDN4-205ENST00000493356 MOV10L1Q9BXT6 1211 aaKnown RBP26.07■■□□□ 1.76
PFDN4-205ENST00000493356 MAGEB6P1A0A0J9YX57 407 aa26.06■■□□□ 1.76
PFDN4-205ENST00000493356 A0A1W2PRG0 241 aa26.06■■□□□ 1.76
PFDN4-205ENST00000493356 EVX2Q03828 476 aa26.06■■□□□ 1.76
PFDN4-205ENST00000493356 COG2Q14746 738 aa26.06■■□□□ 1.76
PFDN4-205ENST00000493356 CEP85Q6P2H3 762 aa26.06■■□□□ 1.76
PFDN4-205ENST00000493356 DPP9Q86TI2 863 aa26.06■■□□□ 1.76
PFDN4-205ENST00000493356 AACSQ86V21 672 aa26.06■■□□□ 1.76
PFDN4-205ENST00000493356 ADORA2AP29274 412 aa26.05■■□□□ 1.76
PFDN4-205ENST00000493356 RTP1P59025 263 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms