RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 PCP11498 1178 aaKnown RBP9.63□□□□□ -0.87
TM4SF1-204ENST00000493348 OSBPP22059 807 aa9.63□□□□□ -0.87
TM4SF1-204ENST00000493348 TM4SF4P48230 202 aa9.63□□□□□ -0.87
TM4SF1-204ENST00000493348 CTCFP49711 727 aaPredicted RBP9.63□□□□□ -0.87
TM4SF1-204ENST00000493348 FXR2P51116 673 aaKnown RBP eCLIP9.63□□□□□ -0.87
TM4SF1-204ENST00000493348 HAND2P61296 217 aa9.63□□□□□ -0.87
TM4SF1-204ENST00000493348 ICA1Q05084 483 aa9.63□□□□□ -0.87
TM4SF1-204ENST00000493348 GABPAQ06546 454 aa9.63□□□□□ -0.87
TM4SF1-204ENST00000493348 TAF1CQ15572 869 aaPredicted RBP9.63□□□□□ -0.87
TM4SF1-204ENST00000493348 RNF20Q5VTR2 975 aa9.63□□□□□ -0.87
TM4SF1-204ENST00000493348 USP17L2Q6R6M4 530 aa9.63□□□□□ -0.87
TM4SF1-204ENST00000493348 IFNL1Q8IU54 200 aa9.63□□□□□ -0.87
TM4SF1-204ENST00000493348 SLC44A5Q8NCS7 719 aa9.63□□□□□ -0.87
TM4SF1-204ENST00000493348 WDR18Q9BV38 432 aa9.63□□□□□ -0.87
TM4SF1-204ENST00000493348 KANSL2Q9H9L4 492 aa9.63□□□□□ -0.87
TM4SF1-204ENST00000493348 ZFYVE28Q9HCC9 887 aa9.63□□□□□ -0.87
TM4SF1-204ENST00000493348 WBP1LQ9NX94 342 aa9.63□□□□□ -0.87
TM4SF1-204ENST00000493348 SAGE1Q9NXZ1 904 aa9.63□□□□□ -0.87
TM4SF1-204ENST00000493348 KCNH4Q9UQ05 1017 aa9.63□□□□□ -0.87
TM4SF1-204ENST00000493348 AFG3L2Q9Y4W6 797 aa9.63□□□□□ -0.87
TM4SF1-204ENST00000493348 LAMA4Q16363 1823 aa9.63□□□□□ -0.87
TM4SF1-204ENST00000493348 A0A0G2JLL6 359 aaPredicted RBP9.62□□□□□ -0.87
TM4SF1-204ENST00000493348 REC8O95072 547 aa9.62□□□□□ -0.87
TM4SF1-204ENST00000493348 AKR1B1P15121 316 aa9.62□□□□□ -0.87
TM4SF1-204ENST00000493348 GJA5P36382 358 aa9.62□□□□□ -0.87
TM4SF1-204ENST00000493348 NT5C2P49902 561 aa9.62□□□□□ -0.87
TM4SF1-204ENST00000493348 HMGCS2P54868 508 aa9.62□□□□□ -0.87
TM4SF1-204ENST00000493348 BACE1P56817 501 aa9.62□□□□□ -0.87
TM4SF1-204ENST00000493348 MTMR2Q13614 643 aa9.62□□□□□ -0.87
TM4SF1-204ENST00000493348 SEPT2Q15019 361 aa9.62□□□□□ -0.87
TM4SF1-204ENST00000493348 ZYXQ15942 572 aaKnown RBP9.62□□□□□ -0.87
TM4SF1-204ENST00000493348 AKNAD1Q5T1N1 836 aa9.62□□□□□ -0.87
TM4SF1-204ENST00000493348 PRRT2Q7Z6L0 340 aaPredicted RBP9.62□□□□□ -0.87
TM4SF1-204ENST00000493348 CCDC84Q86UT8 332 aaPredicted RBP9.62□□□□□ -0.87
TM4SF1-204ENST00000493348 PROCA1Q8NCQ7 364 aaPredicted RBP9.62□□□□□ -0.87
TM4SF1-204ENST00000493348 SMCR8Q8TEV9 937 aaPredicted RBP9.62□□□□□ -0.87
TM4SF1-204ENST00000493348 ESR2Q92731 530 aa9.62□□□□□ -0.87
TM4SF1-204ENST00000493348 ZIC5Q96T25 663 aa9.62□□□□□ -0.87
TM4SF1-204ENST00000493348 PARK7Q99497 189 aaKnown RBP9.62□□□□□ -0.87
TM4SF1-204ENST00000493348 ESYT1Q9BSJ8 1104 aa9.62□□□□□ -0.87
TM4SF1-204ENST00000493348 KRT23Q9C075 422 aa9.62□□□□□ -0.87
TM4SF1-204ENST00000493348 CNNM2Q9H8M5 875 aa9.62□□□□□ -0.87
TM4SF1-204ENST00000493348 GOPCQ9HD26 462 aa9.62□□□□□ -0.87
TM4SF1-204ENST00000493348 ZCCHC17Q9NP64 241 aaKnown RBP9.62□□□□□ -0.87
TM4SF1-204ENST00000493348 RNF186Q9NXI6 227 aa9.62□□□□□ -0.87
TM4SF1-204ENST00000493348 ANAPC4Q9UJX5 808 aa9.62□□□□□ -0.87
TM4SF1-204ENST00000493348 ISY1Q9ULR0 285 aaKnown RBP9.62□□□□□ -0.87
TM4SF1-204ENST00000493348 PCNTO95613 3336 aa9.61□□□□□ -0.87
TM4SF1-204ENST00000493348 PDHXO00330 501 aa9.61□□□□□ -0.87
TM4SF1-204ENST00000493348 MCCP23508 829 aa9.61□□□□□ -0.87
TM4SF1-204ENST00000493348 IRX3P78415 501 aaPredicted RBP9.61□□□□□ -0.87
TM4SF1-204ENST00000493348 TFAP4Q01664 338 aa9.61□□□□□ -0.87
TM4SF1-204ENST00000493348 KIF22Q14807 665 aa9.61□□□□□ -0.87
TM4SF1-204ENST00000493348 ARHGEF6Q15052 776 aa9.61□□□□□ -0.87
TM4SF1-204ENST00000493348 CCDC178Q5BJE1 867 aa9.61□□□□□ -0.87
TM4SF1-204ENST00000493348 RALYLQ86SE5 291 aaKnown RBP9.61□□□□□ -0.87
TM4SF1-204ENST00000493348 ANKRD23Q86SG2 305 aa9.61□□□□□ -0.87
TM4SF1-204ENST00000493348 IQCA1Q86XH1 822 aa9.61□□□□□ -0.87
TM4SF1-204ENST00000493348 BRI3BPQ8WY22 251 aa9.61□□□□□ -0.87
TM4SF1-204ENST00000493348 MS4A4AQ96JQ5 239 aa9.61□□□□□ -0.87
TM4SF1-204ENST00000493348 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.61□□□□□ -0.87
TM4SF1-204ENST00000493348 ERICH2A1L162 156 aa9.6□□□□□ -0.87
TM4SF1-204ENST00000493348 TESPA1A2RU30 521 aaPredicted RBP9.6□□□□□ -0.87
TM4SF1-204ENST00000493348 BTBD19C9JJ37 291 aa9.6□□□□□ -0.87
TM4SF1-204ENST00000493348 TTLL1O95922 423 aa9.6□□□□□ -0.87
TM4SF1-204ENST00000493348 ZKSCAN1P17029 563 aaPredicted RBP9.6□□□□□ -0.87
TM4SF1-204ENST00000493348 RASA1P20936 1047 aa9.6□□□□□ -0.87
TM4SF1-204ENST00000493348 EVX2Q03828 476 aa9.6□□□□□ -0.87
TM4SF1-204ENST00000493348 RRP1BQ14684 758 aaKnown RBP9.6□□□□□ -0.87
TM4SF1-204ENST00000493348 SART3Q15020 963 aaKnown RBP9.6□□□□□ -0.87
TM4SF1-204ENST00000493348 FAM47AQ5JRC9 791 aa9.6□□□□□ -0.87
TM4SF1-204ENST00000493348 CCAR1Q8IX12 1150 aaKnown RBP9.6□□□□□ -0.87
TM4SF1-204ENST00000493348 STAG1Q8WVM7 1258 aa9.6□□□□□ -0.87
TM4SF1-204ENST00000493348 CWC22Q9HCG8 908 aaKnown RBP9.6□□□□□ -0.87
TM4SF1-204ENST00000493348 STX8Q9UNK0 236 aa9.6□□□□□ -0.87
TM4SF1-204ENST00000493348 AGTPBP1Q9UPW5 1226 aa9.6□□□□□ -0.87
TM4SF1-204ENST00000493348 CTDP1Q9Y5B0 961 aaPredicted RBP9.6□□□□□ -0.87
TM4SF1-204ENST00000493348 IGF2BP3O00425 579 aaKnown RBP eCLIP9.59□□□□□ -0.872e-6■■■■□ 22.4
TM4SF1-204ENST00000493348 ORC4O43929 436 aa9.59□□□□□ -0.87
TM4SF1-204ENST00000493348 TBC1D8O95759 1140 aa9.59□□□□□ -0.87
TM4SF1-204ENST00000493348 EEF2P13639 858 aaKnown RBP9.59□□□□□ -0.87
TM4SF1-204ENST00000493348 SH3D19Q5HYK7 790 aa9.59□□□□□ -0.87
TM4SF1-204ENST00000493348 NEDD1Q8NHV4 660 aa9.59□□□□□ -0.87
TM4SF1-204ENST00000493348 GTF3C2Q8WUA4 911 aaPredicted RBP9.59□□□□□ -0.87
TM4SF1-204ENST00000493348 LPAR1Q92633 364 aa9.59□□□□□ -0.87
TM4SF1-204ENST00000493348 UBAC1Q9BSL1 405 aa9.59□□□□□ -0.87
TM4SF1-204ENST00000493348 TANGO6Q9C0B7 1094 aa9.59□□□□□ -0.87
TM4SF1-204ENST00000493348 KIAA1683Q9H0B3 1180 aa9.59□□□□□ -0.87
TM4SF1-204ENST00000493348 CLIP2Q9UDT6 1046 aa9.59□□□□□ -0.87
TM4SF1-204ENST00000493348 TSKSQ9UJT2 592 aa9.59□□□□□ -0.87
TM4SF1-204ENST00000493348 SLC45A1Q9Y2W3 748 aa9.59□□□□□ -0.87
TM4SF1-204ENST00000493348 GTF3C3Q9Y5Q9 886 aa9.59□□□□□ -0.87
TM4SF1-204ENST00000493348 RBM8AQ9Y5S9 174 aaKnown RBP9.59□□□□□ -0.87
TM4SF1-204ENST00000493348 LOC285556D6RIA3 1793 aa9.59□□□□□ -0.87
TM4SF1-204ENST00000493348 CASP8AP2Q9UKL3 1982 aa9.59□□□□□ -0.87
TM4SF1-204ENST00000493348 USP17L15C9J2P7 530 aa9.58□□□□□ -0.88
TM4SF1-204ENST00000493348 USP17L13C9JLJ4 530 aa9.58□□□□□ -0.88
TM4SF1-204ENST00000493348 USP17L11C9JVI0 530 aa9.58□□□□□ -0.88
TM4SF1-204ENST00000493348 USP17L18D6R9N7 530 aa9.58□□□□□ -0.88
TM4SF1-204ENST00000493348 USP17L22D6RA61 530 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms