RNA–Protein interactions for RNA: ENST00000493212.1

PHTF1-212, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 4

Gene PHTF1, Length 956 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-212ENST00000493212 ACER1Q8TDN7 264 aa25.15■■□□□ 1.62
PHTF1-212ENST00000493212 PAGR1Q9BTK6 254 aa25.15■■□□□ 1.62
PHTF1-212ENST00000493212 RABGAP1Q9Y3P9 1069 aa25.15■■□□□ 1.62
PHTF1-212ENST00000493212 NAV1Q8NEY1 1877 aa25.15■■□□□ 1.62
PHTF1-212ENST00000493212 MAGEB6P1A0A0J9YX57 407 aa25.14■■□□□ 1.62
PHTF1-212ENST00000493212 USP17L15C9J2P7 530 aa25.14■■□□□ 1.62
PHTF1-212ENST00000493212 USP17L13C9JLJ4 530 aa25.14■■□□□ 1.62
PHTF1-212ENST00000493212 USP17L11C9JVI0 530 aa25.14■■□□□ 1.62
PHTF1-212ENST00000493212 USP17L18D6R9N7 530 aa25.14■■□□□ 1.62
PHTF1-212ENST00000493212 USP17L22D6RA61 530 aa25.14■■□□□ 1.62
PHTF1-212ENST00000493212 USP17L17D6RBQ6 530 aa25.14■■□□□ 1.62
PHTF1-212ENST00000493212 USP17L19D6RCP7 530 aa25.14■■□□□ 1.62
PHTF1-212ENST00000493212 USP17L20D6RJB6 530 aa25.14■■□□□ 1.62
PHTF1-212ENST00000493212 PRKAR2AP13861 404 aaKnown RBP25.14■■□□□ 1.62
PHTF1-212ENST00000493212 USP14P54578 494 aa25.14■■□□□ 1.62
PHTF1-212ENST00000493212 USP17L24Q0WX57 530 aa25.14■■□□□ 1.62
PHTF1-212ENST00000493212 ZYXQ15942 572 aaKnown RBP25.14■■□□□ 1.62
PHTF1-212ENST00000493212 DIEXFQ68CQ4 756 aaKnown RBP25.14■■□□□ 1.62
PHTF1-212ENST00000493212 CATSPERGQ6ZRH7 1159 aa25.14■■□□□ 1.62
PHTF1-212ENST00000493212 PLEKHH3Q7Z736 793 aa25.14■■□□□ 1.62
PHTF1-212ENST00000493212 RPAP2Q8IXW5 612 aaPredicted RBP25.14■■□□□ 1.62
PHTF1-212ENST00000493212 TRMT44Q8IYL2 757 aaKnown RBP25.14■■□□□ 1.62
PHTF1-212ENST00000493212 KIF1BPQ96EK5 621 aa25.14■■□□□ 1.62
PHTF1-212ENST00000493212 FEZ1Q99689 392 aa25.14■■□□□ 1.62
PHTF1-212ENST00000493212 A0A1W2PPC1 479 aa25.13■■□□□ 1.61
PHTF1-212ENST00000493212 TCRBV5S4A2TA0A5A2 114 aa25.13■■□□□ 1.61
PHTF1-212ENST00000493212 VCAM1P19320 739 aa25.13■■□□□ 1.61
PHTF1-212ENST00000493212 PDE3AQ14432 1141 aa25.13■■□□□ 1.61
PHTF1-212ENST00000493212 RAB3GAP1Q15042 981 aa25.13■■□□□ 1.61
PHTF1-212ENST00000493212 SLC9C2Q5TAH2 1124 aa25.13■■□□□ 1.61
PHTF1-212ENST00000493212 LBX2Q6XYB7 198 aa25.13■■□□□ 1.61
PHTF1-212ENST00000493212 NBPF3Q9H094 633 aa25.13■■□□□ 1.61
PHTF1-212ENST00000493212 ZBTB40Q9NUA8 1239 aa25.13■■□□□ 1.61
PHTF1-212ENST00000493212 MS4A1P11836 297 aa25.12■■□□□ 1.61
PHTF1-212ENST00000493212 RGS2P41220 211 aa25.12■■□□□ 1.61
PHTF1-212ENST00000493212 EVX2Q03828 476 aa25.12■■□□□ 1.61
PHTF1-212ENST00000493212 CACNB2Q08289 660 aaPredicted RBP25.12■■□□□ 1.61
PHTF1-212ENST00000493212 CCL14Q16627 93 aa25.12■■□□□ 1.61
PHTF1-212ENST00000493212 CLASRPQ8N2M8 674 aaKnown RBP25.12■■□□□ 1.61
PHTF1-212ENST00000493212 ZNF532Q9HCE3 1301 aa25.12■■□□□ 1.61
PHTF1-212ENST00000493212 LAMA3Q16787 3333 aa25.11■■□□□ 1.61
PHTF1-212ENST00000493212 ZKSCAN1P17029 563 aaPredicted RBP25.11■■□□□ 1.61
PHTF1-212ENST00000493212 APBA2Q99767 749 aa25.11■■□□□ 1.61
PHTF1-212ENST00000493212 CRNKL1Q9BZJ0 848 aaKnown RBP25.11■■□□□ 1.61
PHTF1-212ENST00000493212 CABP5Q9NP86 173 aa25.11■■□□□ 1.61
PHTF1-212ENST00000493212 DCP1AQ9NPI6 582 aaPredicted RBP25.1■■□□□ 1.61
PHTF1-212ENST00000493212 DDX19BQ9UMR2 479 aa25.1■■□□□ 1.61
PHTF1-212ENST00000493212 GOLIM4O00461 696 aa25.09■■□□□ 1.61
PHTF1-212ENST00000493212 POLR3DP05423 398 aaPredicted RBP25.09■■□□□ 1.61
PHTF1-212ENST00000493212 MAP2K5Q13163 448 aa25.09■■□□□ 1.61
PHTF1-212ENST00000493212 SEPT2Q15019 361 aa25.09■■□□□ 1.61
PHTF1-212ENST00000493212 LHX8Q68G74 356 aa25.09■■□□□ 1.61
PHTF1-212ENST00000493212 CCAR1Q8IX12 1150 aaKnown RBP25.09■■□□□ 1.61
PHTF1-212ENST00000493212 GDF15Q99988 308 aa25.09■■□□□ 1.61
PHTF1-212ENST00000493212 C11orf49Q9H6J7 331 aa25.09■■□□□ 1.61
PHTF1-212ENST00000493212 BTBD7Q9P203 1132 aa25.09■■□□□ 1.61
PHTF1-212ENST00000493212 STAP2Q9UGK3 403 aa25.09■■□□□ 1.61
PHTF1-212ENST00000493212 PFASO15067 1338 aa25.09■■□□□ 1.61
PHTF1-212ENST00000493212 A0A1W2PRG0 241 aa25.08■■□□□ 1.61
PHTF1-212ENST00000493212 SPDYE16A6NNV3 312 aaPredicted RBP25.08■■□□□ 1.61
PHTF1-212ENST00000493212 HMMRO75330 724 aa25.08■■□□□ 1.61
PHTF1-212ENST00000493212 CCNA1P78396 465 aa25.08■■□□□ 1.61
PHTF1-212ENST00000493212 LCORLQ8N3X6 602 aa25.08■■□□□ 1.61
PHTF1-212ENST00000493212 SDR42E1Q8WUS8 393 aa25.08■■□□□ 1.61
PHTF1-212ENST00000493212 EDC3Q96F86 508 aaKnown RBP25.08■■□□□ 1.61
PHTF1-212ENST00000493212 DNAJC2Q99543 621 aaKnown RBP25.08■■□□□ 1.61
PHTF1-212ENST00000493212 MCM9Q9NXL9 1143 aa25.08■■□□□ 1.61
PHTF1-212ENST00000493212 COG6Q9Y2V7 657 aa25.08■■□□□ 1.61
PHTF1-212ENST00000493212 APBB1O00213 710 aa25.07■■□□□ 1.6
PHTF1-212ENST00000493212 RAB11FIP3O75154 756 aa25.07■■□□□ 1.6
PHTF1-212ENST00000493212 IFIT2P09913 472 aaKnown RBP25.07■■□□□ 1.6
PHTF1-212ENST00000493212 COL6A1P12109 1028 aa25.07■■□□□ 1.6
PHTF1-212ENST00000493212 CCND3P30281 292 aaPredicted RBP25.07■■□□□ 1.6
PHTF1-212ENST00000493212 C7orf61Q8IZ16 206 aa25.07■■□□□ 1.6
PHTF1-212ENST00000493212 RPAP3Q9H6T3 665 aaPredicted RBP25.07■■□□□ 1.6
PHTF1-212ENST00000493212 SLC15A5A6NIM6 579 aa25.06■■□□□ 1.6
PHTF1-212ENST00000493212 PTPREP23469 700 aa25.06■■□□□ 1.6
PHTF1-212ENST00000493212 BMP8BP34820 402 aa25.06■■□□□ 1.6
PHTF1-212ENST00000493212 FLRT1Q9NZU1 646 aa25.06■■□□□ 1.6
PHTF1-212ENST00000493212 RLFQ13129 1914 aa25.06■■□□□ 1.6
PHTF1-212ENST00000493212 SOX1O00570 391 aaPredicted RBP25.05■■□□□ 1.6
PHTF1-212ENST00000493212 IGHA2P01877 340 aa25.05■■□□□ 1.6
PHTF1-212ENST00000493212 HOXC6P09630 235 aa25.05■■□□□ 1.6
PHTF1-212ENST00000493212 CYP2D6P10635 497 aa25.05■■□□□ 1.6
PHTF1-212ENST00000493212 GRB14Q14449 540 aa25.05■■□□□ 1.6
PHTF1-212ENST00000493212 A0A0G2JMZ2 1700 aa25.04■■□□□ 1.6
PHTF1-212ENST00000493212 GLRX3O76003 335 aaKnown RBP25.04■■□□□ 1.6
PHTF1-212ENST00000493212 ATP5JP18859 108 aa25.04■■□□□ 1.6
PHTF1-212ENST00000493212 ADD2P35612 726 aa25.04■■□□□ 1.6
PHTF1-212ENST00000493212 SLFNL1Q499Z3 407 aa25.04■■□□□ 1.6
PHTF1-212ENST00000493212 SLC44A5Q8NCS7 719 aa25.04■■□□□ 1.6
PHTF1-212ENST00000493212 PAG1Q9NWQ8 432 aa25.04■■□□□ 1.6
PHTF1-212ENST00000493212 ZMYND8Q9ULU4 1186 aaPredicted RBP25.04■■□□□ 1.6
PHTF1-212ENST00000493212 FRMPD3Q5JV73 1810 aa25.04■■□□□ 1.6
PHTF1-212ENST00000493212 KIAA1755Q5JYT7 1200 aa25.03■■□□□ 1.6
PHTF1-212ENST00000493212 ARMT1Q9H993 441 aa25.03■■□□□ 1.6
PHTF1-212ENST00000493212 SWAP70Q9UH65 585 aa25.03■■□□□ 1.6
PHTF1-212ENST00000493212 ZNF236Q9UL36 1845 aa25.02■■□□□ 1.6
PHTF1-212ENST00000493212 TMEM179Q6ZVK1 233 aa25.02■■□□□ 1.6
PHTF1-212ENST00000493212 SIAH1Q8IUQ4 282 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms