RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 STK11IPQ8N1F8 1099 aa15.91■□□□□ 0.14
MSH6-208ENST00000493177 CPA4Q9UI42 421 aa15.91■□□□□ 0.14
MSH6-208ENST00000493177 ZSWIM8A7E2V4 1837 aa15.91■□□□□ 0.14
MSH6-208ENST00000493177 BAZ2AQ9UIF9 1905 aaKnown RBP15.9■□□□□ 0.14
MSH6-208ENST00000493177 CYP2D7A0A087X1C5 515 aa15.9■□□□□ 0.14
MSH6-208ENST00000493177 ASNSP08243 561 aa15.9■□□□□ 0.14
MSH6-208ENST00000493177 ZKSCAN1P17029 563 aaPredicted RBP15.9■□□□□ 0.14
MSH6-208ENST00000493177 HSPA4P34932 840 aa15.9■□□□□ 0.14
MSH6-208ENST00000493177 SOX10P56693 466 aa15.9■□□□□ 0.14
MSH6-208ENST00000493177 PPARAQ07869 468 aa15.9■□□□□ 0.14
MSH6-208ENST00000493177 NECTIN1Q15223 517 aa15.9■□□□□ 0.14
MSH6-208ENST00000493177 ZNF280CQ8ND82 737 aa15.9■□□□□ 0.14
MSH6-208ENST00000493177 SMCR8Q8TEV9 937 aaPredicted RBP15.9■□□□□ 0.14
MSH6-208ENST00000493177 MGAMO43451 1857 aa15.9■□□□□ 0.14
MSH6-208ENST00000493177 LOC285556D6RIA3 1793 aa15.9■□□□□ 0.14
MSH6-208ENST00000493177 SLC3A2P08195 630 aaKnown RBP15.89■□□□□ 0.13
MSH6-208ENST00000493177 CYP21A2P08686 494 aa15.89■□□□□ 0.13
MSH6-208ENST00000493177 CTDSPL2Q05D32 466 aa15.89■□□□□ 0.13
MSH6-208ENST00000493177 SPP2Q13103 211 aa15.89■□□□□ 0.13
MSH6-208ENST00000493177 SBK1Q52WX2 424 aa15.89■□□□□ 0.13
MSH6-208ENST00000493177 PNMA3Q9UL41 463 aa15.89■□□□□ 0.13
MSH6-208ENST00000493177 DDX60LQ5H9U9 1706 aaKnown RBP15.88■□□□□ 0.13
MSH6-208ENST00000493177 CYP2C8P10632 490 aa15.88■□□□□ 0.13
MSH6-208ENST00000493177 PABPC4Q13310 644 aaKnown RBP eCLIP15.88■□□□□ 0.13
MSH6-208ENST00000493177 C12orf60Q5U649 245 aa15.88■□□□□ 0.13
MSH6-208ENST00000493177 TMOD4Q9NZQ9 345 aa15.88■□□□□ 0.13
MSH6-208ENST00000493177 SERPINB13Q9UIV8 391 aa15.88■□□□□ 0.13
MSH6-208ENST00000493177 PTPN22Q9Y2R2 807 aa15.88■□□□□ 0.13
MSH6-208ENST00000493177 FMNL1O95466 1100 aaPredicted RBP15.87■□□□□ 0.13
MSH6-208ENST00000493177 PLCD1P51178 756 aa15.87■□□□□ 0.13
MSH6-208ENST00000493177 HMGCS2P54868 508 aa15.87■□□□□ 0.13
MSH6-208ENST00000493177 LACTBP83111 547 aaPredicted RBP15.87■□□□□ 0.13
MSH6-208ENST00000493177 GPAT2Q6NUI2 795 aa15.87■□□□□ 0.13
MSH6-208ENST00000493177 RASEFQ8IZ41 740 aa15.87■□□□□ 0.13
MSH6-208ENST00000493177 TBC1D32Q96NH3 1257 aa15.87■□□□□ 0.13
MSH6-208ENST00000493177 DNAJC18Q9H819 358 aa15.87■□□□□ 0.13
MSH6-208ENST00000493177 CABP5Q9NP86 173 aa15.87■□□□□ 0.13
MSH6-208ENST00000493177 TOMM22Q9NS69 142 aa15.87■□□□□ 0.13
MSH6-208ENST00000493177 GINM1Q9NU53 330 aa15.87■□□□□ 0.13
MSH6-208ENST00000493177 ZBTB21Q9ULJ3 1066 aa15.87■□□□□ 0.13
MSH6-208ENST00000493177 AGTPBP1Q9UPW5 1226 aa15.87■□□□□ 0.13
MSH6-208ENST00000493177 SNX14Q9Y5W7 946 aa15.87■□□□□ 0.13
MSH6-208ENST00000493177 OSBPP22059 807 aa15.86■□□□□ 0.13
MSH6-208ENST00000493177 MLLT1Q03111 559 aaPredicted RBP15.86■□□□□ 0.13
MSH6-208ENST00000493177 EVX2Q03828 476 aa15.86■□□□□ 0.13
MSH6-208ENST00000493177 MTMR2Q13614 643 aa15.86■□□□□ 0.13
MSH6-208ENST00000493177 MOGSQ13724 837 aa15.86■□□□□ 0.13
MSH6-208ENST00000493177 RRP1BQ14684 758 aaKnown RBP15.86■□□□□ 0.13
MSH6-208ENST00000493177 CERKLQ49MI3 558 aaPredicted RBP15.86■□□□□ 0.13
MSH6-208ENST00000493177 C17orf99Q6UX52 265 aa15.86■□□□□ 0.13
MSH6-208ENST00000493177 TBC1D10CQ8IV04 446 aa15.86■□□□□ 0.13
MSH6-208ENST00000493177 PROCA1Q8NCQ7 364 aaPredicted RBP15.86■□□□□ 0.13
MSH6-208ENST00000493177 DYNLL2Q96FJ2 89 aa15.86■□□□□ 0.13
MSH6-208ENST00000493177 FEZ1Q99689 392 aa15.86■□□□□ 0.13
MSH6-208ENST00000493177 EHD4Q9H223 541 aa15.86■□□□□ 0.13
MSH6-208ENST00000493177 RNF41Q9H4P4 317 aaPredicted RBP15.86■□□□□ 0.13
MSH6-208ENST00000493177 ANAPC4Q9UJX5 808 aa15.86■□□□□ 0.13
MSH6-208ENST00000493177 SLC45A1Q9Y2W3 748 aa15.86■□□□□ 0.13
MSH6-208ENST00000493177 SMIM22K7EJ46 135 aa15.85■□□□□ 0.13
MSH6-208ENST00000493177 MPHOSPH10O00566 681 aaKnown RBP15.85■□□□□ 0.13
MSH6-208ENST00000493177 HOXD10P28358 340 aa15.85■□□□□ 0.13
MSH6-208ENST00000493177 RBM25P49756 843 aaKnown RBP15.85■□□□□ 0.13
MSH6-208ENST00000493177 PDE4BQ07343 736 aa15.85■□□□□ 0.13
MSH6-208ENST00000493177 TRDNQ13061 729 aa15.85■□□□□ 0.13
MSH6-208ENST00000493177 KRT32Q14532 448 aa15.85■□□□□ 0.13
MSH6-208ENST00000493177 RAB3GAP1Q15042 981 aa15.85■□□□□ 0.13
MSH6-208ENST00000493177 RRP12Q5JTH9 1297 aaKnown RBP15.85■□□□□ 0.13
MSH6-208ENST00000493177 AKNAD1Q5T1N1 836 aa15.85■□□□□ 0.13
MSH6-208ENST00000493177 MFSD6Q6ZSS7 791 aa15.85■□□□□ 0.13
MSH6-208ENST00000493177 ARHGAP39Q9C0H5 1083 aa15.85■□□□□ 0.13
MSH6-208ENST00000493177 MKNK2Q9HBH9 465 aa15.85■□□□□ 0.13
MSH6-208ENST00000493177 TAF6LQ9Y6J9 622 aa15.85■□□□□ 0.13
MSH6-208ENST00000493177 USP17L10C9JJH3 530 aa15.84■□□□□ 0.13
MSH6-208ENST00000493177 E7EWF7 191 aa15.84■□□□□ 0.13
MSH6-208ENST00000493177 GNRH1P01148 92 aa15.84■□□□□ 0.13
MSH6-208ENST00000493177 GH2P01242 217 aa15.84■□□□□ 0.13
MSH6-208ENST00000493177 PSMC4P43686 418 aa15.84■□□□□ 0.13
MSH6-208ENST00000493177 FCGRTP55899 365 aa15.84■□□□□ 0.13
MSH6-208ENST00000493177 ANAPC15P60006 121 aa15.84■□□□□ 0.13
MSH6-208ENST00000493177 IRX3P78415 501 aaPredicted RBP15.84■□□□□ 0.13
MSH6-208ENST00000493177 ABCB5Q2M3G0 1257 aa15.84■□□□□ 0.13
MSH6-208ENST00000493177 SLC9C1Q4G0N8 1177 aa15.84■□□□□ 0.13
MSH6-208ENST00000493177 TREML2Q5T2D2 321 aa15.84■□□□□ 0.13
MSH6-208ENST00000493177 RALYLQ86SE5 291 aaKnown RBP15.84■□□□□ 0.13
MSH6-208ENST00000493177 NBPF11Q86T75 865 aa15.84■□□□□ 0.13
MSH6-208ENST00000493177 METTL16Q86W50 562 aaKnown RBP15.84■□□□□ 0.13
MSH6-208ENST00000493177 STAG1Q8WVM7 1258 aa15.84■□□□□ 0.13
MSH6-208ENST00000493177 KCNB2Q92953 911 aa15.84■□□□□ 0.13
MSH6-208ENST00000493177 JAKMIP1Q96N16 626 aaKnown RBP15.84■□□□□ 0.13
MSH6-208ENST00000493177 NBPF3Q9H094 633 aa15.84■□□□□ 0.13
MSH6-208ENST00000493177 ZNF287Q9HBT7 754 aa15.84■□□□□ 0.13
MSH6-208ENST00000493177 INCENPQ9NQS7 918 aa15.84■□□□□ 0.13
MSH6-208ENST00000493177 PTCH2Q9Y6C5 1203 aa15.84■□□□□ 0.13
MSH6-208ENST00000493177 LAMA4Q16363 1823 aa15.84■□□□□ 0.13
MSH6-208ENST00000493177 C19orf81C9J6K1 198 aa15.83■□□□□ 0.12
MSH6-208ENST00000493177 PRDM1O75626 825 aa15.83■□□□□ 0.12
MSH6-208ENST00000493177 PSMA5P28066 241 aa15.83■□□□□ 0.12
MSH6-208ENST00000493177 BACE1P56817 501 aa15.83■□□□□ 0.12
MSH6-208ENST00000493177 ZYXQ15942 572 aaKnown RBP15.83■□□□□ 0.12
MSH6-208ENST00000493177 STOX1Q6ZVD7 989 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms