RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 OSBP2Q969R2 916 aa21.68■■□□□ 1.06
PTPRU-207ENST00000492954 DDRGK1Q96HY6 314 aa21.68■■□□□ 1.06
PTPRU-207ENST00000492954 TXNRD2Q9NNW7 524 aa21.68■■□□□ 1.06
PTPRU-207ENST00000492954 BIN2Q9UBW5 565 aaPredicted RBP21.68■■□□□ 1.06
PTPRU-207ENST00000492954 SWAP70Q9UH65 585 aa21.68■■□□□ 1.06
PTPRU-207ENST00000492954 TTC41PQ6P2S7 1318 aa21.68■■□□□ 1.06
PTPRU-207ENST00000492954 RNF113AO15541 343 aaKnown RBP21.67■■□□□ 1.06
PTPRU-207ENST00000492954 ELNP15502 786 aa21.67■■□□□ 1.06
PTPRU-207ENST00000492954 USP14P54578 494 aa21.67■■□□□ 1.06
PTPRU-207ENST00000492954 AMOTL1Q8IY63 956 aa21.67■■□□□ 1.06
PTPRU-207ENST00000492954 APPBP2Q92624 585 aa21.67■■□□□ 1.06
PTPRU-207ENST00000492954 STRBPQ96SI9 672 aaKnown RBP21.67■■□□□ 1.06
PTPRU-207ENST00000492954 ERC2O15083 957 aa21.66■■□□□ 1.06
PTPRU-207ENST00000492954 VCAM1P19320 739 aa21.66■■□□□ 1.06
PTPRU-207ENST00000492954 IRF5Q13568 498 aa21.66■■□□□ 1.06
PTPRU-207ENST00000492954 CTR9Q6PD62 1173 aa21.66■■□□□ 1.06
PTPRU-207ENST00000492954 POTEEQ6S8J3 1075 aa21.66■■□□□ 1.06
PTPRU-207ENST00000492954 RBPJLQ9UBG7 517 aa21.66■■□□□ 1.06
PTPRU-207ENST00000492954 TAOK2Q9UL54 1235 aa21.66■■□□□ 1.06
PTPRU-207ENST00000492954 BAZ2AQ9UIF9 1905 aaKnown RBP21.65■■□□□ 1.06
PTPRU-207ENST00000492954 A0A1W2PRG0 241 aa21.65■■□□□ 1.06
PTPRU-207ENST00000492954 USP17L15C9J2P7 530 aa21.65■■□□□ 1.06
PTPRU-207ENST00000492954 USP17L13C9JLJ4 530 aa21.65■■□□□ 1.06
PTPRU-207ENST00000492954 USP17L11C9JVI0 530 aa21.65■■□□□ 1.06
PTPRU-207ENST00000492954 USP17L18D6R9N7 530 aa21.65■■□□□ 1.06
PTPRU-207ENST00000492954 USP17L22D6RA61 530 aa21.65■■□□□ 1.06
PTPRU-207ENST00000492954 USP17L17D6RBQ6 530 aa21.65■■□□□ 1.06
PTPRU-207ENST00000492954 USP17L19D6RCP7 530 aa21.65■■□□□ 1.06
PTPRU-207ENST00000492954 USP17L20D6RJB6 530 aa21.65■■□□□ 1.06
PTPRU-207ENST00000492954 GLRX3O76003 335 aaKnown RBP21.65■■□□□ 1.06
PTPRU-207ENST00000492954 ZFYP08048 801 aaPredicted RBP21.65■■□□□ 1.06
PTPRU-207ENST00000492954 CCL5P13501 91 aa21.65■■□□□ 1.06
PTPRU-207ENST00000492954 AKR1B1P15121 316 aa21.65■■□□□ 1.06
PTPRU-207ENST00000492954 MX1P20591 662 aa21.65■■□□□ 1.06
PTPRU-207ENST00000492954 CDK8P49336 464 aa21.65■■□□□ 1.06
PTPRU-207ENST00000492954 UBXN2AP68543 259 aa21.65■■□□□ 1.06
PTPRU-207ENST00000492954 USP17L24Q0WX57 530 aa21.65■■□□□ 1.06
PTPRU-207ENST00000492954 ANKRD45Q5TZF3 282 aa21.65■■□□□ 1.06
PTPRU-207ENST00000492954 TMEM179Q6ZVK1 233 aa21.65■■□□□ 1.06
PTPRU-207ENST00000492954 GPRC5AQ8NFJ5 357 aa21.65■■□□□ 1.06
PTPRU-207ENST00000492954 PAGR1Q9BTK6 254 aa21.65■■□□□ 1.06
PTPRU-207ENST00000492954 HDAC1Q13547 482 aaPredicted RBP21.64■■□□□ 1.05
PTPRU-207ENST00000492954 CATSPERGQ6ZRH7 1159 aa21.64■■□□□ 1.05
PTPRU-207ENST00000492954 C16orf86Q6ZW13 317 aa21.64■■□□□ 1.05
PTPRU-207ENST00000492954 CLEC10AQ8IUN9 316 aa21.64■■□□□ 1.05
PTPRU-207ENST00000492954 SALL3Q9BXA9 1300 aa21.63■■□□□ 1.05
PTPRU-207ENST00000492954 GSG1L2A8MUP6 293 aa21.63■■□□□ 1.05
PTPRU-207ENST00000492954 M0R2C6 588 aa21.63■■□□□ 1.05
PTPRU-207ENST00000492954 GPAA1O43292 621 aa21.63■■□□□ 1.05
PTPRU-207ENST00000492954 INHAP05111 366 aa21.63■■□□□ 1.05
PTPRU-207ENST00000492954 ERVK-9P63128 1117 aa21.63■■□□□ 1.05
PTPRU-207ENST00000492954 ERVK-24P63145 666 aa21.63■■□□□ 1.05
PTPRU-207ENST00000492954 PXYLP1Q8TE99 480 aa21.63■■□□□ 1.05
PTPRU-207ENST00000492954 GTF3C2Q8WUA4 911 aaPredicted RBP21.63■■□□□ 1.05
PTPRU-207ENST00000492954 GCC1Q96CN9 775 aa21.63■■□□□ 1.05
PTPRU-207ENST00000492954 RNF208Q9H0X6 261 aa21.63■■□□□ 1.05
PTPRU-207ENST00000492954 RPAP3Q9H6T3 665 aaPredicted RBP21.63■■□□□ 1.05
PTPRU-207ENST00000492954 ARPP21Q9UBL0 812 aaPredicted RBP21.63■■□□□ 1.05
PTPRU-207ENST00000492954 ZBTB47Q9UFB7 747 aaPredicted RBP21.63■■□□□ 1.05
PTPRU-207ENST00000492954 GJD2Q9UKL4 321 aa21.63■■□□□ 1.05
PTPRU-207ENST00000492954 DOCK3Q8IZD9 2030 aa21.62■■□□□ 1.05
PTPRU-207ENST00000492954 Q3C1V9 767 aa21.62■■□□□ 1.05
PTPRU-207ENST00000492954 PRPF38BQ5VTL8 546 aaKnown RBP21.62■■□□□ 1.05
PTPRU-207ENST00000492954 SHISA4Q96DD7 197 aa21.62■■□□□ 1.05
PTPRU-207ENST00000492954 CCDC17Q96LX7 622 aa21.62■■□□□ 1.05
PTPRU-207ENST00000492954 FSD1Q9BTV5 496 aa21.62■■□□□ 1.05
PTPRU-207ENST00000492954 UNC93B1Q9H1C4 597 aa21.62■■□□□ 1.05
PTPRU-207ENST00000492954 CNMDO75829 334 aa21.61■■□□□ 1.05
PTPRU-207ENST00000492954 ICA1Q05084 483 aa21.61■■□□□ 1.05
PTPRU-207ENST00000492954 LRRFIP1Q32MZ4 808 aaKnown RBP21.61■■□□□ 1.05
PTPRU-207ENST00000492954 KIAA1755Q5JYT7 1200 aa21.61■■□□□ 1.05
PTPRU-207ENST00000492954 SIAH1Q8IUQ4 282 aa21.61■■□□□ 1.05
PTPRU-207ENST00000492954 PORCNQ9H237 461 aa21.61■■□□□ 1.05
PTPRU-207ENST00000492954 EPB41L4AQ9HCS5 686 aaPredicted RBP21.61■■□□□ 1.05
PTPRU-207ENST00000492954 GJB1P08034 283 aa21.6■■□□□ 1.05
PTPRU-207ENST00000492954 SBK1Q52WX2 424 aa21.6■■□□□ 1.05
PTPRU-207ENST00000492954 GIMAP6Q6P9H5 292 aa21.6■■□□□ 1.05
PTPRU-207ENST00000492954 STK11IPQ8N1F8 1099 aa21.6■■□□□ 1.05
PTPRU-207ENST00000492954 SEC62Q99442 399 aaKnown RBP21.6■■□□□ 1.05
PTPRU-207ENST00000492954 RABGAP1Q9Y3P9 1069 aa21.6■■□□□ 1.05
PTPRU-207ENST00000492954 MAPK4P31152 587 aa21.59■■□□□ 1.05
PTPRU-207ENST00000492954 GJA8P48165 433 aa21.59■■□□□ 1.05
PTPRU-207ENST00000492954 AAMPQ13685 434 aa21.59■■□□□ 1.05
PTPRU-207ENST00000492954 CCAR1Q8IX12 1150 aaKnown RBP21.59■■□□□ 1.05
PTPRU-207ENST00000492954 ARHGEF10LQ9HCE6 1279 aa21.59■■□□□ 1.05
PTPRU-207ENST00000492954 SPDYE16A6NNV3 312 aaPredicted RBP21.58■■□□□ 1.05
PTPRU-207ENST00000492954 MINDY4BA8MYZ0 360 aa21.58■■□□□ 1.05
PTPRU-207ENST00000492954 GNAT2P19087 354 aa21.58■■□□□ 1.05
PTPRU-207ENST00000492954 TDO2P48775 406 aa21.58■■□□□ 1.05
PTPRU-207ENST00000492954 LBX2Q6XYB7 198 aa21.58■■□□□ 1.05
PTPRU-207ENST00000492954 EXOC6Q8TAG9 804 aa21.58■■□□□ 1.05
PTPRU-207ENST00000492954 NKX2-3Q8TAU0 364 aa21.58■■□□□ 1.05
PTPRU-207ENST00000492954 TANGO6Q9C0B7 1094 aa21.58■■□□□ 1.05
PTPRU-207ENST00000492954 TMX2Q9Y320 296 aa21.58■■□□□ 1.05
PTPRU-207ENST00000492954 HMGCRP04035 888 aa21.57■■□□□ 1.04
PTPRU-207ENST00000492954 APPP05067 770 aa21.57■■□□□ 1.04
PTPRU-207ENST00000492954 CYP2B6P20813 491 aa21.57■■□□□ 1.04
PTPRU-207ENST00000492954 PDE1AP54750 535 aa21.57■■□□□ 1.04
PTPRU-207ENST00000492954 ZMYM1Q5SVZ6 1142 aa21.57■■□□□ 1.04
PTPRU-207ENST00000492954 GPR142Q7Z601 462 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms