RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 RBPJLQ9UBG7 517 aa15.04■□□□□ -0
COL6A1-205ENST00000492851 RABGAP1Q9Y3P9 1069 aa15.04■□□□□ -0
COL6A1-205ENST00000492851 KIAA0100Q14667 2235 aaKnown RBP15.03■□□□□ -0
COL6A1-205ENST00000492851 FARP2O94887 1054 aaPredicted RBP15.03■□□□□ -0
COL6A1-205ENST00000492851 SHMT1P34896 483 aa15.03■□□□□ -0
COL6A1-205ENST00000492851 ADD2P35612 726 aa15.03■□□□□ -0
COL6A1-205ENST00000492851 ERVK-9P63128 1117 aa15.03■□□□□ -0
COL6A1-205ENST00000492851 ERVK-24P63145 666 aa15.03■□□□□ -0
COL6A1-205ENST00000492851 GABPAQ06546 454 aa15.03■□□□□ -0
COL6A1-205ENST00000492851 UBE3CQ15386 1083 aa15.03■□□□□ -0
COL6A1-205ENST00000492851 CATSPERGQ6ZRH7 1159 aa15.03■□□□□ -0
COL6A1-205ENST00000492851 CRISPLD2Q9H0B8 497 aa15.03■□□□□ -0
COL6A1-205ENST00000492851 BCL11AQ9H165 835 aa15.03■□□□□ -0
COL6A1-205ENST00000492851 DCP1AQ9NPI6 582 aaPredicted RBP15.03■□□□□ -0
COL6A1-205ENST00000492851 FOCADQ5VW36 1801 aa15.03■□□□□ -0
COL6A1-205ENST00000492851 MGAMO43451 1857 aa15.02■□□□□ -0
COL6A1-205ENST00000492851 ATAD5Q96QE3 1844 aa15.02■□□□□ -0
COL6A1-205ENST00000492851 SHROOM1Q2M3G4 852 aaPredicted RBP15.02■□□□□ -0
COL6A1-205ENST00000492851 LBX2Q6XYB7 198 aa15.02■□□□□ -0
COL6A1-205ENST00000492851 TMEM179Q6ZVK1 233 aa15.02■□□□□ -0
COL6A1-205ENST00000492851 PLEKHH3Q7Z736 793 aa15.02■□□□□ -0
COL6A1-205ENST00000492851 GPATCH3Q96I76 525 aa15.02■□□□□ -0
COL6A1-205ENST00000492851 CCDC17Q96LX7 622 aa15.02■□□□□ -0
COL6A1-205ENST00000492851 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.02■□□□□ -0
COL6A1-205ENST00000492851 SH2D4AQ9H788 454 aa15.02■□□□□ -0
COL6A1-205ENST00000492851 HOXC10Q9NYD6 342 aa15.02■□□□□ -0
COL6A1-205ENST00000492851 H0YGN5 161 aa15.01□□□□□ -0.01
COL6A1-205ENST00000492851 MPHOSPH10O00566 681 aaKnown RBP15.01□□□□□ -0.01
COL6A1-205ENST00000492851 CYP2B6P20813 491 aa15.01□□□□□ -0.01
COL6A1-205ENST00000492851 RGS2P41220 211 aa15.01□□□□□ -0.01
COL6A1-205ENST00000492851 Q3C1V9 767 aa15.01□□□□□ -0.01
COL6A1-205ENST00000492851 NECAB2Q7Z6G3 386 aa15.01□□□□□ -0.01
COL6A1-205ENST00000492851 LCORLQ8N3X6 602 aa15.01□□□□□ -0.01
COL6A1-205ENST00000492851 SDR42E1Q8WUS8 393 aa15.01□□□□□ -0.01
COL6A1-205ENST00000492851 PAGR1Q9BTK6 254 aa15.01□□□□□ -0.01
COL6A1-205ENST00000492851 TXNRD2Q9NNW7 524 aa15.01□□□□□ -0.01
COL6A1-205ENST00000492851 ECHDC1Q9NTX5 307 aa15.01□□□□□ -0.01
COL6A1-205ENST00000492851 SIPA1L1O43166 1804 aa15.01□□□□□ -0.01
COL6A1-205ENST00000492851 VCAM1P19320 739 aa15□□□□□ -0.01
COL6A1-205ENST00000492851 COG2Q14746 738 aa15□□□□□ -0.01
COL6A1-205ENST00000492851 ZYXQ15942 572 aaKnown RBP15□□□□□ -0.01
COL6A1-205ENST00000492851 LRRFIP1Q32MZ4 808 aaKnown RBP15□□□□□ -0.01
COL6A1-205ENST00000492851 GPR142Q7Z601 462 aa15□□□□□ -0.01
COL6A1-205ENST00000492851 ACER1Q8TDN7 264 aa15□□□□□ -0.01
COL6A1-205ENST00000492851 LPAR1Q92633 364 aa15□□□□□ -0.01
COL6A1-205ENST00000492851 DCTPP1Q9H773 170 aa15□□□□□ -0.01
COL6A1-205ENST00000492851 ARMT1Q9H993 441 aa15□□□□□ -0.01
COL6A1-205ENST00000492851 ARHGEF10LQ9HCE6 1279 aa15□□□□□ -0.01
COL6A1-205ENST00000492851 MBD4O95243 580 aa14.99□□□□□ -0.01
COL6A1-205ENST00000492851 ZKSCAN1P17029 563 aaPredicted RBP14.99□□□□□ -0.01
COL6A1-205ENST00000492851 SEPT2Q15019 361 aa14.99□□□□□ -0.01
COL6A1-205ENST00000492851 C20orf194Q5TEA3 1177 aa14.99□□□□□ -0.01
COL6A1-205ENST00000492851 EDC3Q96F86 508 aaKnown RBP14.99□□□□□ -0.01
COL6A1-205ENST00000492851 RPAP3Q9H6T3 665 aaPredicted RBP14.99□□□□□ -0.01
COL6A1-205ENST00000492851 COLQQ9Y215 455 aaPredicted RBP14.99□□□□□ -0.01
COL6A1-205ENST00000492851 IVNS1ABPQ9Y6Y0 642 aa14.99□□□□□ -0.01
COL6A1-205ENST00000492851 BRCA2P51587 3418 aa14.99□□□□□ -0.01
COL6A1-205ENST00000492851 CDK5RAP2Q96SN8 1893 aa14.98□□□□□ -0.01
COL6A1-205ENST00000492851 EVI5O60447 810 aa14.98□□□□□ -0.01
COL6A1-205ENST00000492851 GUCY1A2P33402 732 aa14.98□□□□□ -0.01
COL6A1-205ENST00000492851 MORN1Q5T089 497 aa14.98□□□□□ -0.01
COL6A1-205ENST00000492851 MAP3K21Q5TCX8 1036 aa14.98□□□□□ -0.01
COL6A1-205ENST00000492851 C12orf60Q5U649 245 aa14.98□□□□□ -0.01
COL6A1-205ENST00000492851 TRIB2Q92519 343 aa14.98□□□□□ -0.01
COL6A1-205ENST00000492851 USP6NLQ92738 828 aa14.98□□□□□ -0.01
COL6A1-205ENST00000492851 NBPF3Q9H094 633 aa14.98□□□□□ -0.01
COL6A1-205ENST00000492851 SLC4A4Q9Y6R1 1079 aa14.98□□□□□ -0.01
COL6A1-205ENST00000492851 MYH1P12882 1939 aa14.98□□□□□ -0.01
COL6A1-205ENST00000492851 MYO5AQ9Y4I1 1855 aaKnown RBP14.97□□□□□ -0.01
COL6A1-205ENST00000492851 SLC15A5A6NIM6 579 aa14.97□□□□□ -0.01
COL6A1-205ENST00000492851 USP17L12C9JPN9 530 aa14.97□□□□□ -0.01
COL6A1-205ENST00000492851 USP17L21D6R901 530 aa14.97□□□□□ -0.01
COL6A1-205ENST00000492851 STRNO43815 780 aa14.97□□□□□ -0.01
COL6A1-205ENST00000492851 ZFYP08048 801 aaPredicted RBP14.97□□□□□ -0.01
COL6A1-205ENST00000492851 PRKAR2AP13861 404 aaKnown RBP14.97□□□□□ -0.01
COL6A1-205ENST00000492851 MAP2K5Q13163 448 aa14.97□□□□□ -0.01
COL6A1-205ENST00000492851 GIMAP6Q6P9H5 292 aa14.97□□□□□ -0.01
COL6A1-205ENST00000492851 MB21D1Q8N884 522 aa14.97□□□□□ -0.01
COL6A1-205ENST00000492851 PAWRQ96IZ0 340 aaKnown RBP14.97□□□□□ -0.01
COL6A1-205ENST00000492851 APBA2Q99767 749 aa14.97□□□□□ -0.01
COL6A1-205ENST00000492851 PORCNQ9H237 461 aa14.97□□□□□ -0.01
COL6A1-205ENST00000492851 MKI67P46013 3256 aaKnown RBP14.97□□□□□ -0.01
COL6A1-205ENST00000492851 PRKAB2O43741 272 aa14.96□□□□□ -0.01
COL6A1-205ENST00000492851 PTPREP23469 700 aa14.96□□□□□ -0.01
COL6A1-205ENST00000492851 CDK8P49336 464 aa14.96□□□□□ -0.01
COL6A1-205ENST00000492851 WDR78Q5VTH9 848 aa14.96□□□□□ -0.01
COL6A1-205ENST00000492851 MFSD14CQ5VZR4 134 aa14.96□□□□□ -0.01
COL6A1-205ENST00000492851 KBTBD3Q8NAB2 608 aa14.96□□□□□ -0.01
COL6A1-205ENST00000492851 TANGO6Q9C0B7 1094 aa14.96□□□□□ -0.01
COL6A1-205ENST00000492851 KANSL2Q9H9L4 492 aa14.96□□□□□ -0.01
COL6A1-205ENST00000492851 ARPP21Q9UBL0 812 aaPredicted RBP14.96□□□□□ -0.01
COL6A1-205ENST00000492851 OGDHLQ9ULD0 1010 aa14.96□□□□□ -0.01
COL6A1-205ENST00000492851 TMX2Q9Y320 296 aa14.96□□□□□ -0.01
COL6A1-205ENST00000492851 A0A1W2PRG0 241 aa14.95□□□□□ -0.02
COL6A1-205ENST00000492851 SPDYE16A6NNV3 312 aaPredicted RBP14.95□□□□□ -0.02
COL6A1-205ENST00000492851 SMARCA5O60264 1052 aaPredicted RBP14.95□□□□□ -0.02
COL6A1-205ENST00000492851 CNMDO75829 334 aa14.95□□□□□ -0.02
COL6A1-205ENST00000492851 HOXC6P09630 235 aa14.95□□□□□ -0.02
COL6A1-205ENST00000492851 CYP2D6P10635 497 aa14.95□□□□□ -0.02
COL6A1-205ENST00000492851 GNAT2P19087 354 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms