RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 CAP2P40123 477 aa12.02□□□□□ -0.49
TNFRSF9-203ENST00000492571 TIMM10P62072 90 aa12.02□□□□□ -0.49
TNFRSF9-203ENST00000492571 MECOMQ03112 1051 aa12.02□□□□□ -0.49
TNFRSF9-203ENST00000492571 RASGRF1Q13972 1273 aa12.02□□□□□ -0.49
TNFRSF9-203ENST00000492571 GTF3C2Q8WUA4 911 aaPredicted RBP12.02□□□□□ -0.49
TNFRSF9-203ENST00000492571 SSH1Q8WYL5 1049 aa12.02□□□□□ -0.49
TNFRSF9-203ENST00000492571 RAI14Q9P0K7 980 aa12.02□□□□□ -0.49
TNFRSF9-203ENST00000492571 PI4KBQ9UBF8 816 aa12.02□□□□□ -0.49
TNFRSF9-203ENST00000492571 MORF4L1Q9UBU8 362 aa12.02□□□□□ -0.49
TNFRSF9-203ENST00000492571 PRKAG2Q9UGJ0 569 aa12.02□□□□□ -0.49
TNFRSF9-203ENST00000492571 FAM196BA6NMK8 535 aa12.01□□□□□ -0.49
TNFRSF9-203ENST00000492571 C19orf81C9J6K1 198 aa12.01□□□□□ -0.49
TNFRSF9-203ENST00000492571 E9PSI1 815 aa12.01□□□□□ -0.49
TNFRSF9-203ENST00000492571 DPYSL4O14531 572 aa12.01□□□□□ -0.49
TNFRSF9-203ENST00000492571 GLRX3O76003 335 aaKnown RBP12.01□□□□□ -0.49
TNFRSF9-203ENST00000492571 BAG3O95817 575 aa12.01□□□□□ -0.49
TNFRSF9-203ENST00000492571 ADORA1P30542 326 aa12.01□□□□□ -0.49
TNFRSF9-203ENST00000492571 TRIM32Q13049 653 aa12.01□□□□□ -0.49
TNFRSF9-203ENST00000492571 ALDH1L2Q3SY69 923 aa12.01□□□□□ -0.49
TNFRSF9-203ENST00000492571 SH3D19Q5HYK7 790 aa12.01□□□□□ -0.49
TNFRSF9-203ENST00000492571 TRIB2Q92519 343 aa12.01□□□□□ -0.49
TNFRSF9-203ENST00000492571 NEUROD6Q96NK8 337 aa12.01□□□□□ -0.49
TNFRSF9-203ENST00000492571 DHX36Q9H2U1 1008 aaKnown RBP12.01□□□□□ -0.49
TNFRSF9-203ENST00000492571 SMC4Q9NTJ3 1288 aa12.01□□□□□ -0.49
TNFRSF9-203ENST00000492571 PLA2G2EQ9NZK7 142 aa12.01□□□□□ -0.49
TNFRSF9-203ENST00000492571 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.01□□□□□ -0.49
TNFRSF9-203ENST00000492571 A0A1B0GUL7 405 aa12□□□□□ -0.49
TNFRSF9-203ENST00000492571 SLURP2P0DP57 97 aa12□□□□□ -0.49
TNFRSF9-203ENST00000492571 HOXA7P31268 230 aaPredicted RBP12□□□□□ -0.49
TNFRSF9-203ENST00000492571 RGS2P41220 211 aa12□□□□□ -0.49
TNFRSF9-203ENST00000492571 BACE1P56817 501 aa12□□□□□ -0.49
TNFRSF9-203ENST00000492571 MTMR2Q13614 643 aa12□□□□□ -0.49
TNFRSF9-203ENST00000492571 PHF6Q8IWS0 365 aaKnown RBP eCLIP12□□□□□ -0.49
TNFRSF9-203ENST00000492571 TEX11Q8IYF3 940 aa12□□□□□ -0.49
TNFRSF9-203ENST00000492571 CRACR2BQ8N4Y2 399 aaPredicted RBP12□□□□□ -0.49
TNFRSF9-203ENST00000492571 XAGE2Q96GT9 111 aa12□□□□□ -0.49
TNFRSF9-203ENST00000492571 WDR18Q9BV38 432 aa12□□□□□ -0.49
TNFRSF9-203ENST00000492571 COPRSQ9NQ92 184 aa12□□□□□ -0.49
TNFRSF9-203ENST00000492571 LRP2BPQ9P2M1 347 aa12□□□□□ -0.49
TNFRSF9-203ENST00000492571 USP17L10C9JJH3 530 aa11.99□□□□□ -0.49
TNFRSF9-203ENST00000492571 RHBDL3P58872 404 aa11.99□□□□□ -0.49
TNFRSF9-203ENST00000492571 HERVK_113P62684 666 aa11.99□□□□□ -0.49
TNFRSF9-203ENST00000492571 CCNA1P78396 465 aa11.99□□□□□ -0.49
TNFRSF9-203ENST00000492571 MDM2Q00987 491 aaPredicted RBP11.99□□□□□ -0.49
TNFRSF9-203ENST00000492571 MAP3K21Q5TCX8 1036 aa11.99□□□□□ -0.49
TNFRSF9-203ENST00000492571 MFSD14CQ5VZR4 134 aa11.99□□□□□ -0.49
TNFRSF9-203ENST00000492571 FAM109BQ6ICB4 259 aaPredicted RBP11.99□□□□□ -0.49
TNFRSF9-203ENST00000492571 ATF7IPQ6VMQ6 1270 aa11.99□□□□□ -0.49
TNFRSF9-203ENST00000492571 FOXP4Q8IVH2 680 aaPredicted RBP11.99□□□□□ -0.49
TNFRSF9-203ENST00000492571 P2RX7Q99572 595 aaKnown RBP11.99□□□□□ -0.49
TNFRSF9-203ENST00000492571 GINM1Q9NU53 330 aa11.99□□□□□ -0.49
TNFRSF9-203ENST00000492571 PA2G4Q9UQ80 394 aaKnown RBP11.99□□□□□ -0.49
TNFRSF9-203ENST00000492571 RFX7Q2KHR2 1363 aa11.98□□□□□ -0.49
TNFRSF9-203ENST00000492571 MSCO60682 206 aa11.98□□□□□ -0.49
TNFRSF9-203ENST00000492571 COL9A1P20849 921 aa11.98□□□□□ -0.49
TNFRSF9-203ENST00000492571 CACNB2Q08289 660 aaPredicted RBP11.98□□□□□ -0.49
TNFRSF9-203ENST00000492571 PLEKHH3Q7Z736 793 aa11.98□□□□□ -0.49
TNFRSF9-203ENST00000492571 SPATA5Q8NB90 893 aa11.98□□□□□ -0.49
TNFRSF9-203ENST00000492571 NSUN4Q96CB9 384 aaKnown RBP11.98□□□□□ -0.49
TNFRSF9-203ENST00000492571 API5Q9BZZ5 524 aaKnown RBP11.98□□□□□ -0.49
TNFRSF9-203ENST00000492571 CUL9Q8IWT3 2517 aa11.98□□□□□ -0.49
TNFRSF9-203ENST00000492571 PFASO15067 1338 aa11.97□□□□□ -0.49
TNFRSF9-203ENST00000492571 SRGAP3O43295 1099 aa11.97□□□□□ -0.49
TNFRSF9-203ENST00000492571 HLA-DOAP06340 250 aa11.97□□□□□ -0.49
TNFRSF9-203ENST00000492571 CNGA1P29973 690 aa11.97□□□□□ -0.49
TNFRSF9-203ENST00000492571 TFCP2Q12800 502 aa11.97□□□□□ -0.49
TNFRSF9-203ENST00000492571 ZNF697Q5TEC3 545 aa11.97□□□□□ -0.49
TNFRSF9-203ENST00000492571 WDR78Q5VTH9 848 aa11.97□□□□□ -0.49
TNFRSF9-203ENST00000492571 SPRYD3Q8NCJ5 442 aa11.97□□□□□ -0.49
TNFRSF9-203ENST00000492571 EDC3Q96F86 508 aaKnown RBP11.97□□□□□ -0.49
TNFRSF9-203ENST00000492571 APBA2Q99767 749 aa11.97□□□□□ -0.49
TNFRSF9-203ENST00000492571 PAGR1Q9BTK6 254 aa11.97□□□□□ -0.49
TNFRSF9-203ENST00000492571 COL25A1Q9BXS0 654 aaPredicted RBP11.97□□□□□ -0.49
TNFRSF9-203ENST00000492571 SENP6Q9GZR1 1112 aaPredicted RBP11.97□□□□□ -0.49
TNFRSF9-203ENST00000492571 HMG20BQ9P0W2 317 aa11.97□□□□□ -0.49
TNFRSF9-203ENST00000492571 IVNS1ABPQ9Y6Y0 642 aa11.97□□□□□ -0.49
TNFRSF9-203ENST00000492571 GNAI3P08754 354 aa11.96□□□□□ -0.49
TNFRSF9-203ENST00000492571 UQCRFS1P1P0C7P4 283 aa11.96□□□□□ -0.49
TNFRSF9-203ENST00000492571 COL6A1P12109 1028 aa11.96□□□□□ -0.49
TNFRSF9-203ENST00000492571 ERVK-9P63128 1117 aa11.96□□□□□ -0.49
TNFRSF9-203ENST00000492571 ERVK-24P63145 666 aa11.96□□□□□ -0.49
TNFRSF9-203ENST00000492571 ATP2B2Q01814 1243 aa11.96□□□□□ -0.49
TNFRSF9-203ENST00000492571 LRRC26Q2I0M4 334 aa11.96□□□□□ -0.49
TNFRSF9-203ENST00000492571 NAA16Q6N069 864 aaPredicted RBP11.96□□□□□ -0.49
TNFRSF9-203ENST00000492571 TYW1BQ6NUM6 668 aa11.96□□□□□ -0.49
TNFRSF9-203ENST00000492571 TBC1D9Q6ZT07 1266 aa11.96□□□□□ -0.49
TNFRSF9-203ENST00000492571 GPR142Q7Z601 462 aa11.96□□□□□ -0.49
TNFRSF9-203ENST00000492571 RBPJLQ9UBG7 517 aa11.96□□□□□ -0.49
TNFRSF9-203ENST00000492571 MGAMO43451 1857 aa11.95□□□□□ -0.5
TNFRSF9-203ENST00000492571 PPP1R3GB7ZBB8 358 aa11.95□□□□□ -0.5
TNFRSF9-203ENST00000492571 CCND3P30281 292 aaPredicted RBP11.95□□□□□ -0.5
TNFRSF9-203ENST00000492571 MAP2K5Q13163 448 aa11.95□□□□□ -0.5
TNFRSF9-203ENST00000492571 G3BP1Q13283 466 aaKnown RBP eCLIP11.95□□□□□ -0.5
TNFRSF9-203ENST00000492571 PROX2Q3B8N5 592 aa11.95□□□□□ -0.5
TNFRSF9-203ENST00000492571 USP17L2Q6R6M4 530 aa11.95□□□□□ -0.5
TNFRSF9-203ENST00000492571 SH3RF3Q8TEJ3 882 aaPredicted RBP11.95□□□□□ -0.5
TNFRSF9-203ENST00000492571 FAM161BQ96MY7 647 aa11.95□□□□□ -0.5
TNFRSF9-203ENST00000492571 FEZ1Q99689 392 aa11.95□□□□□ -0.5
TNFRSF9-203ENST00000492571 TXNRD2Q9NNW7 524 aa11.95□□□□□ -0.5
TNFRSF9-203ENST00000492571 NOB1Q9ULX3 412 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms