RNA–Protein interactions for RNA: ENST00000492496.1

PKP4-214, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-214ENST00000492496 KIAA1683Q9H0B3 1180 aa19.09■□□□□ 0.65
PKP4-214ENST00000492496 PTPN22Q9Y2R2 807 aa19.09■□□□□ 0.65
PKP4-214ENST00000492496 ROBO3Q96MS0 1386 aa19.08■□□□□ 0.65
PKP4-214ENST00000492496 MPHOSPH10O00566 681 aaKnown RBP19.08■□□□□ 0.64
PKP4-214ENST00000492496 TDO2P48775 406 aa19.08■□□□□ 0.64
PKP4-214ENST00000492496 SEPT2Q15019 361 aa19.08■□□□□ 0.64
PKP4-214ENST00000492496 IFNL3Q8IZI9 196 aa19.08■□□□□ 0.64
PKP4-214ENST00000492496 FEZ1Q99689 392 aa19.08■□□□□ 0.64
PKP4-214ENST00000492496 NACAP1Q9BZK3 213 aa19.08■□□□□ 0.64
PKP4-214ENST00000492496 EPB41L4AQ9HCS5 686 aaPredicted RBP19.08■□□□□ 0.64
PKP4-214ENST00000492496 HELLSQ9NRZ9 838 aa19.08■□□□□ 0.64
PKP4-214ENST00000492496 EMILIN3Q9NT22 766 aa19.08■□□□□ 0.64
PKP4-214ENST00000492496 SMIM22K7EJ46 135 aa19.07■□□□□ 0.64
PKP4-214ENST00000492496 APPP05067 770 aa19.07■□□□□ 0.64
PKP4-214ENST00000492496 GCLCP48506 637 aaPredicted RBP19.07■□□□□ 0.64
PKP4-214ENST00000492496 PRMT2P55345 433 aa19.07■□□□□ 0.64
PKP4-214ENST00000492496 ARHGAP39Q9C0H5 1083 aa19.07■□□□□ 0.64
PKP4-214ENST00000492496 ASCC2Q9H1I8 757 aaPredicted RBP19.07■□□□□ 0.64
PKP4-214ENST00000492496 GREB1LQ9C091 1923 aaPredicted RBP19.07■□□□□ 0.64
PKP4-214ENST00000492496 MINDY4BA8MYZ0 360 aa19.06■□□□□ 0.64
PKP4-214ENST00000492496 TRIM6-TRIM34B2RNG4 842 aa19.06■□□□□ 0.64
PKP4-214ENST00000492496 PSMC4P43686 418 aa19.06■□□□□ 0.64
PKP4-214ENST00000492496 IRX3P78415 501 aaPredicted RBP19.06■□□□□ 0.64
PKP4-214ENST00000492496 ACER1Q8TDN7 264 aa19.06■□□□□ 0.64
PKP4-214ENST00000492496 AKR1B1P15121 316 aa19.05■□□□□ 0.64
PKP4-214ENST00000492496 HOXD10P28358 340 aa19.05■□□□□ 0.64
PKP4-214ENST00000492496 FCGRTP55899 365 aa19.05■□□□□ 0.64
PKP4-214ENST00000492496 FAM110CQ1W6H9 321 aa19.05■□□□□ 0.64
PKP4-214ENST00000492496 RILPL2Q969X0 211 aa19.05■□□□□ 0.64
PKP4-214ENST00000492496 FMNL1O95466 1100 aaPredicted RBP19.04■□□□□ 0.64
PKP4-214ENST00000492496 CTGFP29279 349 aa19.04■□□□□ 0.64
PKP4-214ENST00000492496 ZYXQ15942 572 aaKnown RBP19.04■□□□□ 0.64
PKP4-214ENST00000492496 MCMDC2Q4G0Z9 681 aa19.04■□□□□ 0.64
PKP4-214ENST00000492496 ANKRD13CQ8N6S4 541 aa19.04■□□□□ 0.64
PKP4-214ENST00000492496 GTF3C2Q8WUA4 911 aaPredicted RBP19.04■□□□□ 0.64
PKP4-214ENST00000492496 TRIM47Q96LD4 638 aa19.04■□□□□ 0.64
PKP4-214ENST00000492496 NAPBQ9H115 298 aa19.04■□□□□ 0.64
PKP4-214ENST00000492496 ZNF287Q9HBT7 754 aa19.04■□□□□ 0.64
PKP4-214ENST00000492496 ARHGEF10LQ9HCE6 1279 aa19.04■□□□□ 0.64
PKP4-214ENST00000492496 USP17L15C9J2P7 530 aa19.03■□□□□ 0.64
PKP4-214ENST00000492496 USP17L13C9JLJ4 530 aa19.03■□□□□ 0.64
PKP4-214ENST00000492496 USP17L11C9JVI0 530 aa19.03■□□□□ 0.64
PKP4-214ENST00000492496 USP17L18D6R9N7 530 aa19.03■□□□□ 0.64
PKP4-214ENST00000492496 USP17L22D6RA61 530 aa19.03■□□□□ 0.64
PKP4-214ENST00000492496 USP17L17D6RBQ6 530 aa19.03■□□□□ 0.64
PKP4-214ENST00000492496 USP17L19D6RCP7 530 aa19.03■□□□□ 0.64
PKP4-214ENST00000492496 USP17L20D6RJB6 530 aa19.03■□□□□ 0.64
PKP4-214ENST00000492496 USP17L24Q0WX57 530 aa19.03■□□□□ 0.64
PKP4-214ENST00000492496 CCDC129Q6ZRS4 1044 aa19.03■□□□□ 0.64
PKP4-214ENST00000492496 SH2D4AQ9H788 454 aa19.03■□□□□ 0.64
PKP4-214ENST00000492496 MKNK2Q9HBH9 465 aa19.03■□□□□ 0.64
PKP4-214ENST00000492496 FOXD4L1Q9NU39 408 aa19.03■□□□□ 0.64
PKP4-214ENST00000492496 MORF4L1Q9UBU8 362 aa19.03■□□□□ 0.64
PKP4-214ENST00000492496 SRRDQ9UH36 339 aa19.03■□□□□ 0.64
PKP4-214ENST00000492496 DOCK3Q8IZD9 2030 aa19.03■□□□□ 0.64
PKP4-214ENST00000492496 A0A1W2PRG0 241 aa19.02■□□□□ 0.64
PKP4-214ENST00000492496 VCAM1P19320 739 aa19.02■□□□□ 0.64
PKP4-214ENST00000492496 RASA1P20936 1047 aa19.02■□□□□ 0.64
PKP4-214ENST00000492496 HERVK_113P62684 666 aa19.02■□□□□ 0.64
PKP4-214ENST00000492496 ICA1Q05084 483 aa19.02■□□□□ 0.64
PKP4-214ENST00000492496 FAM227BQ96M60 508 aa19.02■□□□□ 0.64
PKP4-214ENST00000492496 P2RX7Q99572 595 aaKnown RBP19.02■□□□□ 0.64
PKP4-214ENST00000492496 KANSL2Q9H9L4 492 aa19.02■□□□□ 0.64
PKP4-214ENST00000492496 TMX2Q9Y320 296 aa19.02■□□□□ 0.64
PKP4-214ENST00000492496 PTCH2Q9Y6C5 1203 aa19.02■□□□□ 0.64
PKP4-214ENST00000492496 MYH4Q9Y623 1939 aa19.02■□□□□ 0.63
PKP4-214ENST00000492496 A0A0D9SFI3 127 aa19.01■□□□□ 0.63
PKP4-214ENST00000492496 FOXP2O15409 715 aa19.01■□□□□ 0.63
PKP4-214ENST00000492496 SLC3A2P08195 630 aaKnown RBP19.01■□□□□ 0.63
PKP4-214ENST00000492496 SDSP20132 328 aa19.01■□□□□ 0.63
PKP4-214ENST00000492496 PDE4AP27815 886 aa19.01■□□□□ 0.63
PKP4-214ENST00000492496 NMIQ13287 307 aaPredicted RBP19.01■□□□□ 0.63
PKP4-214ENST00000492496 ALX1Q15699 326 aa19.01■□□□□ 0.63
PKP4-214ENST00000492496 CATSPERGQ6ZRH7 1159 aa19.01■□□□□ 0.63
PKP4-214ENST00000492496 SIAH1Q8IUQ4 282 aa19.01■□□□□ 0.63
PKP4-214ENST00000492496 ARMC5Q96C12 935 aa19.01■□□□□ 0.63
PKP4-214ENST00000492496 RBBP6Q7Z6E9 1792 aaKnown RBP19.01■□□□□ 0.63
PKP4-214ENST00000492496 HIP1O00291 1037 aa19■□□□□ 0.63
PKP4-214ENST00000492496 HOXD11P31277 338 aaPredicted RBP19■□□□□ 0.63
PKP4-214ENST00000492496 RGS19P49795 217 aa19■□□□□ 0.63
PKP4-214ENST00000492496 MFAP1P55081 439 aaKnown RBP19■□□□□ 0.63
PKP4-214ENST00000492496 PDE4BQ07343 736 aa19■□□□□ 0.63
PKP4-214ENST00000492496 PPARAQ07869 468 aa19■□□□□ 0.63
PKP4-214ENST00000492496 ZNF444Q8N0Y2 327 aaPredicted RBP19■□□□□ 0.63
PKP4-214ENST00000492496 STK11IPQ8N1F8 1099 aa19■□□□□ 0.63
PKP4-214ENST00000492496 LPAR1Q92633 364 aa19■□□□□ 0.63
PKP4-214ENST00000492496 RLFQ13129 1914 aa19■□□□□ 0.63
PKP4-214ENST00000492496 PARP14Q460N5 1801 aa19■□□□□ 0.63
PKP4-214ENST00000492496 MYPNQ86TC9 1320 aa19■□□□□ 0.63
PKP4-214ENST00000492496 ECM2O94769 699 aaPredicted RBP18.99■□□□□ 0.63
PKP4-214ENST00000492496 SLC9C1Q4G0N8 1177 aa18.99■□□□□ 0.63
PKP4-214ENST00000492496 VPS53Q5VIR6 699 aa18.99■□□□□ 0.63
PKP4-214ENST00000492496 NBPF11Q86T75 865 aa18.99■□□□□ 0.63
PKP4-214ENST00000492496 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.99■□□□□ 0.63
PKP4-214ENST00000492496 RPAP3Q9H6T3 665 aaPredicted RBP18.99■□□□□ 0.63
PKP4-214ENST00000492496 VCPKMTQ9H867 229 aa18.99■□□□□ 0.63
PKP4-214ENST00000492496 ZMYM6O95789 1325 aa18.99■□□□□ 0.63
PKP4-214ENST00000492496 CCDC171Q6TFL3 1326 aa18.99■□□□□ 0.63
PKP4-214ENST00000492496 TNPO2O14787 897 aaKnown RBP18.98■□□□□ 0.63
PKP4-214ENST00000492496 EEF2P13639 858 aaKnown RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms