RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 FAM98CQ17RN3 349 aaKnown RBP17.25■□□□□ 0.35
TNFRSF1B-203ENST00000492361 NEK11Q8NG66 645 aa17.25■□□□□ 0.35
TNFRSF1B-203ENST00000492361 MAP3K14Q99558 947 aa17.25■□□□□ 0.35
TNFRSF1B-203ENST00000492361 KAT14Q9H8E8 782 aa17.25■□□□□ 0.35
TNFRSF1B-203ENST00000492361 ENC1O14682 589 aa17.24■□□□□ 0.35
TNFRSF1B-203ENST00000492361 UBXN1Q04323 297 aa17.24■□□□□ 0.35
TNFRSF1B-203ENST00000492361 DIXDC1Q155Q3 683 aa17.24■□□□□ 0.35
TNFRSF1B-203ENST00000492361 GDAQ9Y2T3 454 aa17.24■□□□□ 0.35
TNFRSF1B-203ENST00000492361 LRRC37A3O60309 1634 aa17.24■□□□□ 0.35
TNFRSF1B-203ENST00000492361 UBA7P41226 1012 aa17.24■□□□□ 0.35
TNFRSF1B-203ENST00000492361 CAGE1Q8TC20 777 aa17.24■□□□□ 0.35
TNFRSF1B-203ENST00000492361 ARHGAP6O43182 974 aa17.24■□□□□ 0.35
TNFRSF1B-203ENST00000492361 IDEP14735 1019 aa17.24■□□□□ 0.35
TNFRSF1B-203ENST00000492361 TXLNAP40222 546 aa17.24■□□□□ 0.35
TNFRSF1B-203ENST00000492361 TFAP4Q01664 338 aa17.24■□□□□ 0.35
TNFRSF1B-203ENST00000492361 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.24■□□□□ 0.35
TNFRSF1B-203ENST00000492361 CPDO75976 1380 aa17.24■□□□□ 0.35
TNFRSF1B-203ENST00000492361 MST1RQ04912 1400 aa17.23■□□□□ 0.35
TNFRSF1B-203ENST00000492361 RFX7Q2KHR2 1363 aa17.23■□□□□ 0.35
TNFRSF1B-203ENST00000492361 CCDC175P0C221 793 aa17.23■□□□□ 0.35
TNFRSF1B-203ENST00000492361 PTPREP23469 700 aa17.23■□□□□ 0.35
TNFRSF1B-203ENST00000492361 RASGRP2Q7LDG7 609 aa17.23■□□□□ 0.35
TNFRSF1B-203ENST00000492361 TRIM47Q96LD4 638 aa17.23■□□□□ 0.35
TNFRSF1B-203ENST00000492361 FBXO2Q9UK22 296 aaPredicted RBP17.23■□□□□ 0.35
TNFRSF1B-203ENST00000492361 TRIM49BA6NDI0 452 aa17.23■□□□□ 0.35
TNFRSF1B-203ENST00000492361 TRIM28Q13263 835 aaKnown RBP17.23■□□□□ 0.35
TNFRSF1B-203ENST00000492361 MAPKAPK5Q8IW41 473 aa17.23■□□□□ 0.35
TNFRSF1B-203ENST00000492361 TMTC2Q8N394 836 aa17.23■□□□□ 0.35
TNFRSF1B-203ENST00000492361 JCADQ9P266 1359 aa17.23■□□□□ 0.35
TNFRSF1B-203ENST00000492361 A0A087X0B3 334 aa17.23■□□□□ 0.35
TNFRSF1B-203ENST00000492361 USP17L3A6NCW0 530 aa17.23■□□□□ 0.35
TNFRSF1B-203ENST00000492361 USP17L4A6NCW7 530 aa17.23■□□□□ 0.35
TNFRSF1B-203ENST00000492361 IKBKBO14920 756 aa17.23■□□□□ 0.35
TNFRSF1B-203ENST00000492361 PDE4CQ08493 712 aa17.23■□□□□ 0.35
TNFRSF1B-203ENST00000492361 USP17L1Q7RTZ2 530 aa17.23■□□□□ 0.35
TNFRSF1B-203ENST00000492361 MLKLQ8NB16 471 aa17.23■□□□□ 0.35
TNFRSF1B-203ENST00000492361 ZMYND10O75800 440 aa17.22■□□□□ 0.35
TNFRSF1B-203ENST00000492361 LIFRP42702 1097 aa17.22■□□□□ 0.35
TNFRSF1B-203ENST00000492361 LETM2Q2VYF4 491 aa17.22■□□□□ 0.35
TNFRSF1B-203ENST00000492361 RABEP2Q9H5N1 569 aa17.22■□□□□ 0.35
TNFRSF1B-203ENST00000492361 LMAN1P49257 510 aa17.22■□□□□ 0.35
TNFRSF1B-203ENST00000492361 INF2Q27J81 1249 aa17.22■□□□□ 0.35
TNFRSF1B-203ENST00000492361 ZNF444Q8N0Y2 327 aaPredicted RBP17.22■□□□□ 0.35
TNFRSF1B-203ENST00000492361 MRPL44Q9H9J2 332 aaKnown RBP17.22■□□□□ 0.35
TNFRSF1B-203ENST00000492361 OVOS2A0A0G2JMS6 1433 aa17.22■□□□□ 0.35
TNFRSF1B-203ENST00000492361 TCRBV5S4A2TA0A5A2 114 aa17.22■□□□□ 0.35
TNFRSF1B-203ENST00000492361 CD44P16070 742 aaKnown RBP17.22■□□□□ 0.35
TNFRSF1B-203ENST00000492361 KRT9P35527 623 aa17.22■□□□□ 0.35
TNFRSF1B-203ENST00000492361 CUL4BQ13620 913 aa17.22■□□□□ 0.35
TNFRSF1B-203ENST00000492361 TANGO6Q9C0B7 1094 aa17.22■□□□□ 0.35
TNFRSF1B-203ENST00000492361 INTS13Q9NVM9 706 aa17.22■□□□□ 0.35
TNFRSF1B-203ENST00000492361 GNAT2P19087 354 aa17.21■□□□□ 0.35
TNFRSF1B-203ENST00000492361 IL6STP40189 918 aaPredicted RBP17.21■□□□□ 0.35
TNFRSF1B-203ENST00000492361 PICALMQ13492 652 aa17.21■□□□□ 0.35
TNFRSF1B-203ENST00000492361 ITPK1Q13572 414 aa17.21■□□□□ 0.35
TNFRSF1B-203ENST00000492361 KIAA1328Q86T90 577 aa17.21■□□□□ 0.35
TNFRSF1B-203ENST00000492361 PAGE5Q96GU1 130 aa17.21■□□□□ 0.35
TNFRSF1B-203ENST00000492361 GTPBP4Q9BZE4 634 aaKnown RBP17.21■□□□□ 0.35
TNFRSF1B-203ENST00000492361 MAGEC2Q9UBF1 373 aaPredicted RBP17.21■□□□□ 0.35
TNFRSF1B-203ENST00000492361 ZPR1O75312 459 aa17.21■□□□□ 0.35
TNFRSF1B-203ENST00000492361 CRNKL1Q9BZJ0 848 aaKnown RBP17.21■□□□□ 0.35
TNFRSF1B-203ENST00000492361 ZNF652Q9Y2D9 606 aa17.21■□□□□ 0.35
TNFRSF1B-203ENST00000492361 PSDA5PKW4 1024 aaPredicted RBP17.2■□□□□ 0.34
TNFRSF1B-203ENST00000492361 TSPY3P0CV98 308 aa17.2■□□□□ 0.34
TNFRSF1B-203ENST00000492361 TSPY8P0CW00 308 aa17.2■□□□□ 0.34
TNFRSF1B-203ENST00000492361 TGFBRAP1Q8WUH2 860 aa17.2■□□□□ 0.34
TNFRSF1B-203ENST00000492361 ARFGAP3Q9NP61 516 aa17.2■□□□□ 0.34
TNFRSF1B-203ENST00000492361 FBXO3Q9UK99 471 aa17.2■□□□□ 0.34
TNFRSF1B-203ENST00000492361 GNPATO15228 680 aa17.2■□□□□ 0.34
TNFRSF1B-203ENST00000492361 IPO7O95373 1038 aaKnown RBP17.2■□□□□ 0.34
TNFRSF1B-203ENST00000492361 VGLL2Q8N8G2 317 aa17.2■□□□□ 0.34
TNFRSF1B-203ENST00000492361 ZNF219Q9P2Y4 722 aaPredicted RBP17.2■□□□□ 0.34
TNFRSF1B-203ENST00000492361 TUBE1Q9UJT0 475 aa17.2■□□□□ 0.34
TNFRSF1B-203ENST00000492361 ARID4AP29374 1257 aaPredicted RBP17.2■□□□□ 0.34
TNFRSF1B-203ENST00000492361 RAD51AP2Q09MP3 1159 aa17.2■□□□□ 0.34
TNFRSF1B-203ENST00000492361 JAKMIP3Q5VZ66 844 aa17.2■□□□□ 0.34
TNFRSF1B-203ENST00000492361 NELFBQ8WX92 580 aa17.2■□□□□ 0.34
TNFRSF1B-203ENST00000492361 HPS3Q969F9 1004 aa17.2■□□□□ 0.34
TNFRSF1B-203ENST00000492361 NLRP3Q96P20 1036 aa17.2■□□□□ 0.34
TNFRSF1B-203ENST00000492361 SGMS1Q86VZ5 419 aa17.19■□□□□ 0.34
TNFRSF1B-203ENST00000492361 AMOTL1Q8IY63 956 aa17.19■□□□□ 0.34
TNFRSF1B-203ENST00000492361 STAG2Q8N3U4 1231 aa17.19■□□□□ 0.34
TNFRSF1B-203ENST00000492361 IQUBQ8NA54 791 aa17.19■□□□□ 0.34
TNFRSF1B-203ENST00000492361 SETDB2Q96T68 719 aa17.19■□□□□ 0.34
TNFRSF1B-203ENST00000492361 HPSEQ9Y251 543 aa17.19■□□□□ 0.34
TNFRSF1B-203ENST00000492361 MACROD2A1Z1Q3 448 aa17.19■□□□□ 0.34
TNFRSF1B-203ENST00000492361 HIBADHP31937 336 aaKnown RBP17.19■□□□□ 0.34
TNFRSF1B-203ENST00000492361 MECOMQ03112 1051 aa17.19■□□□□ 0.34
TNFRSF1B-203ENST00000492361 UBA5Q9GZZ9 404 aa17.19■□□□□ 0.34
TNFRSF1B-203ENST00000492361 HSD3B7Q9H2F3 369 aa17.19■□□□□ 0.34
TNFRSF1B-203ENST00000492361 SUGCTQ9HAC7 445 aa17.19■□□□□ 0.34
TNFRSF1B-203ENST00000492361 TRIM10Q9UDY6 481 aa17.19■□□□□ 0.34
TNFRSF1B-203ENST00000492361 SRPRBQ9Y5M8 271 aaKnown RBP17.19■□□□□ 0.34
TNFRSF1B-203ENST00000492361 PNMA6AP0CW24 399 aaPredicted RBP17.19■□□□□ 0.34
TNFRSF1B-203ENST00000492361 SRBD1Q8N5C6 995 aaKnown RBP17.19■□□□□ 0.34
TNFRSF1B-203ENST00000492361 TIGD1Q96MW7 591 aa17.19■□□□□ 0.34
TNFRSF1B-203ENST00000492361 C8orf37Q96NL8 207 aa17.19■□□□□ 0.34
TNFRSF1B-203ENST00000492361 FOXP1Q9H334 677 aaPredicted RBP17.19■□□□□ 0.34
TNFRSF1B-203ENST00000492361 ZNF446Q9NWS9 450 aa17.19■□□□□ 0.34
TNFRSF1B-203ENST00000492361 MED1Q15648 1581 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms