RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 MINDY4BA8MYZ0 360 aa6.32□□□□□ -1.4
VTA1-204ENST00000491881 B8ZZF3 427 aa6.32□□□□□ -1.4
VTA1-204ENST00000491881 PRRG2O14669 202 aa6.32□□□□□ -1.4
VTA1-204ENST00000491881 FANCGO15287 622 aa6.32□□□□□ -1.4
VTA1-204ENST00000491881 GDNFP39905 211 aa6.32□□□□□ -1.4
VTA1-204ENST00000491881 MPRIPQ6WCQ1 1025 aa6.32□□□□□ -1.4
VTA1-204ENST00000491881 KCT2Q8NC54 265 aa6.32□□□□□ -1.4
VTA1-204ENST00000491881 HSPA12BQ96MM6 686 aa6.32□□□□□ -1.4
VTA1-204ENST00000491881 MIR1-1HGQ9H1L0 117 aa6.32□□□□□ -1.4
VTA1-204ENST00000491881 ATP13A1Q9HD20 1204 aa6.32□□□□□ -1.4
VTA1-204ENST00000491881 CYP8B1Q9UNU6 501 aa6.32□□□□□ -1.4
VTA1-204ENST00000491881 TLR6Q9Y2C9 796 aa6.32□□□□□ -1.4
VTA1-204ENST00000491881 KRT1P04264 644 aa6.31□□□□□ -1.4
VTA1-204ENST00000491881 TMEM253P0C7T8 217 aa6.31□□□□□ -1.4
VTA1-204ENST00000491881 BMP6P22004 513 aa6.31□□□□□ -1.4
VTA1-204ENST00000491881 ZBTB37Q5TC79 503 aa6.31□□□□□ -1.4
VTA1-204ENST00000491881 CDKAL1Q5VV42 579 aa6.31□□□□□ -1.4
VTA1-204ENST00000491881 AGMOQ6ZNB7 445 aa6.31□□□□□ -1.4
VTA1-204ENST00000491881 ARMCX6Q7L4S7 300 aa6.31□□□□□ -1.4
VTA1-204ENST00000491881 ZNF654Q8IZM8 581 aa6.31□□□□□ -1.4
VTA1-204ENST00000491881 PHC3Q8NDX5 983 aa6.31□□□□□ -1.4
VTA1-204ENST00000491881 TGIF2Q9GZN2 237 aa6.31□□□□□ -1.4
VTA1-204ENST00000491881 SEMA3GQ9NS98 782 aa6.31□□□□□ -1.4
VTA1-204ENST00000491881 C19orf73Q9NVV2 129 aa6.31□□□□□ -1.4
VTA1-204ENST00000491881 CACNA2D2Q9NY47 1150 aa6.31□□□□□ -1.4
VTA1-204ENST00000491881 DDX41Q9UJV9 622 aaKnown RBP6.31□□□□□ -1.4
VTA1-204ENST00000491881 TPX2Q9ULW0 747 aaKnown RBP6.31□□□□□ -1.4
VTA1-204ENST00000491881 NPIPB6E9PJ23 425 aa6.3□□□□□ -1.4
VTA1-204ENST00000491881 LRIG2O94898 1065 aa6.3□□□□□ -1.4
VTA1-204ENST00000491881 TRIM37O94972 964 aa6.3□□□□□ -1.4
VTA1-204ENST00000491881 TFE3P19532 575 aaPredicted RBP6.3□□□□□ -1.4
VTA1-204ENST00000491881 RING1Q06587 406 aa6.3□□□□□ -1.4
VTA1-204ENST00000491881 SNAP47Q5SQN1 464 aa6.3□□□□□ -1.4
VTA1-204ENST00000491881 TTLL10Q6ZVT0 673 aa6.3□□□□□ -1.4
VTA1-204ENST00000491881 GRIN3AQ8TCU5 1115 aa6.3□□□□□ -1.4
VTA1-204ENST00000491881 CCDC120Q96HB5 630 aa6.3□□□□□ -1.4
VTA1-204ENST00000491881 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.3□□□□□ -1.4
VTA1-204ENST00000491881 PRR33A8MZF0 331 aa6.29□□□□□ -1.4
VTA1-204ENST00000491881 H3BS24 57 aa6.29□□□□□ -1.4
VTA1-204ENST00000491881 PF4P02776 101 aa6.29□□□□□ -1.4
VTA1-204ENST00000491881 EIF4A3P38919 411 aaKnown RBP6.29□□□□□ -1.4
VTA1-204ENST00000491881 LMNB2Q03252 620 aa6.29□□□□□ -1.4
VTA1-204ENST00000491881 FAM160A1Q05DH4 1040 aa6.29□□□□□ -1.4
VTA1-204ENST00000491881 CAMK2GQ13555 558 aaPredicted RBP6.29□□□□□ -1.4
VTA1-204ENST00000491881 SFRP5Q5T4F7 317 aa6.29□□□□□ -1.4
VTA1-204ENST00000491881 LCE5AQ5TCM9 118 aa6.29□□□□□ -1.4
VTA1-204ENST00000491881 RASIP1Q5U651 963 aa6.29□□□□□ -1.4
VTA1-204ENST00000491881 SCARA3Q6AZY7 606 aa6.29□□□□□ -1.4
VTA1-204ENST00000491881 MFSD4AQ8N468 514 aa6.29□□□□□ -1.4
VTA1-204ENST00000491881 ELMO3Q96BJ8 720 aa6.29□□□□□ -1.4
VTA1-204ENST00000491881 RHOVQ96L33 236 aa6.29□□□□□ -1.4
VTA1-204ENST00000491881 RAPGEFL1Q9UHV5 662 aa6.29□□□□□ -1.4
VTA1-204ENST00000491881 PCDHA4Q9UN74 947 aa6.29□□□□□ -1.4
VTA1-204ENST00000491881 SLITRK5O94991 958 aa6.28□□□□□ -1.4
VTA1-204ENST00000491881 RACK1P63244 317 aaKnown RBP6.28□□□□□ -1.4
VTA1-204ENST00000491881 RAD51AP2Q09MP3 1159 aa6.28□□□□□ -1.4
VTA1-204ENST00000491881 SEPT6Q14141 434 aa6.28□□□□□ -1.4
VTA1-204ENST00000491881 AMIGO3Q86WK7 504 aa6.28□□□□□ -1.4
VTA1-204ENST00000491881 KIAA0825Q8IV33 1275 aa6.28□□□□□ -1.4
VTA1-204ENST00000491881 GOLM1Q8NBJ4 401 aa6.28□□□□□ -1.4
VTA1-204ENST00000491881 ZNF507Q8TCN5 953 aa6.28□□□□□ -1.4
VTA1-204ENST00000491881 SPON2Q9BUD6 331 aa6.28□□□□□ -1.4
VTA1-204ENST00000491881 EPB41L4BQ9H329 900 aa6.28□□□□□ -1.4
VTA1-204ENST00000491881 DCP1AQ9NPI6 582 aaPredicted RBP6.28□□□□□ -1.4
VTA1-204ENST00000491881 SUPT16HQ9Y5B9 1047 aaKnown RBP6.28□□□□□ -1.4
VTA1-204ENST00000491881 PCDHB5Q9Y5E4 795 aa6.28□□□□□ -1.4
VTA1-204ENST00000491881 TCAF2A6NFQ2 919 aa6.27□□□□□ -1.41
VTA1-204ENST00000491881 BPNT1O95861 308 aa6.27□□□□□ -1.41
VTA1-204ENST00000491881 RAC2P15153 192 aa6.27□□□□□ -1.41
VTA1-204ENST00000491881 ZC3H6P61129 1189 aaKnown RBP6.27□□□□□ -1.41
VTA1-204ENST00000491881 GNL2Q13823 731 aaKnown RBP6.27□□□□□ -1.41
VTA1-204ENST00000491881 KCNA10Q16322 511 aa6.27□□□□□ -1.41
VTA1-204ENST00000491881 CIAPIN1Q6FI81 312 aa6.27□□□□□ -1.41
VTA1-204ENST00000491881 ATG14Q6ZNE5 492 aa6.27□□□□□ -1.41
VTA1-204ENST00000491881 ABHD4Q8TB40 342 aa6.27□□□□□ -1.41
VTA1-204ENST00000491881 JARID2Q92833 1246 aaPredicted RBP6.27□□□□□ -1.41
VTA1-204ENST00000491881 ALPK1Q96QP1 1244 aa6.27□□□□□ -1.41
VTA1-204ENST00000491881 MIPEPQ99797 713 aa6.27□□□□□ -1.41
VTA1-204ENST00000491881 ACBD3Q9H3P7 528 aa6.27□□□□□ -1.41
VTA1-204ENST00000491881 INPP5FQ9Y2H2 1132 aa6.27□□□□□ -1.41
VTA1-204ENST00000491881 PRAMEF27A3QJZ7 478 aa6.26□□□□□ -1.41
VTA1-204ENST00000491881 INHBBP09529 407 aa6.26□□□□□ -1.41
VTA1-204ENST00000491881 BUD31P41223 144 aaPredicted RBP6.26□□□□□ -1.41
VTA1-204ENST00000491881 FBXL19Q6PCT2 694 aa6.26□□□□□ -1.41
VTA1-204ENST00000491881 C22orf34Q6ZV56 151 aa6.26□□□□□ -1.41
VTA1-204ENST00000491881 TTC6Q86TZ1 520 aa6.26□□□□□ -1.41
VTA1-204ENST00000491881 CCDC84Q86UT8 332 aaPredicted RBP6.26□□□□□ -1.41
VTA1-204ENST00000491881 ZNF296Q8WUU4 475 aaPredicted RBP6.26□□□□□ -1.41
VTA1-204ENST00000491881 GAL3ST3Q96A11 431 aa6.26□□□□□ -1.41
VTA1-204ENST00000491881 KCNK12Q9HB15 430 aa6.26□□□□□ -1.41
VTA1-204ENST00000491881 CAPN10Q9HC96 672 aa6.26□□□□□ -1.41
VTA1-204ENST00000491881 CD320Q9NPF0 282 aa6.26□□□□□ -1.41
VTA1-204ENST00000491881 ADAMTS1Q9UHI8 967 aa6.26□□□□□ -1.41
VTA1-204ENST00000491881 CNTNAP4Q9C0A0 1308 aa6.25□□□□□ -1.41
VTA1-204ENST00000491881 BNC2Q6ZN30 1099 aaPredicted RBP6.25□□□□□ -1.41
VTA1-204ENST00000491881 THAP5Q7Z6K1 395 aa6.25□□□□□ -1.41
VTA1-204ENST00000491881 GATAD2BQ8WXI9 593 aa6.25□□□□□ -1.41
VTA1-204ENST00000491881 UBE2FQ969M7 185 aa6.25□□□□□ -1.41
VTA1-204ENST00000491881 SLAMF8Q9P0V8 285 aa6.25□□□□□ -1.41
VTA1-204ENST00000491881 ST14Q9Y5Y6 855 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms