RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 ANKLE1Q8NAG6 615 aa10.58□□□□□ -0.72
NUP50-217ENST00000491860 DNAJC2Q99543 621 aaKnown RBP10.58□□□□□ -0.72
NUP50-217ENST00000491860 NUDT12Q9BQG2 462 aa10.58□□□□□ -0.72
NUP50-217ENST00000491860 LRRCC1Q9C099 1032 aa10.58□□□□□ -0.72
NUP50-217ENST00000491860 ANTXR1Q9H6X2 564 aa10.58□□□□□ -0.72
NUP50-217ENST00000491860 PAK6Q9NQU5 681 aaPredicted RBP10.58□□□□□ -0.72
NUP50-217ENST00000491860 ATP8A2Q9NTI2 1148 aa10.58□□□□□ -0.72
NUP50-217ENST00000491860 PAG1Q9NWQ8 432 aa10.58□□□□□ -0.72
NUP50-217ENST00000491860 MYH8P13535 1937 aa10.57□□□□□ -0.72
NUP50-217ENST00000491860 GOLIM4O00461 696 aa10.57□□□□□ -0.72
NUP50-217ENST00000491860 TFRCP02786 760 aaKnown RBP10.57□□□□□ -0.72
NUP50-217ENST00000491860 RAB3GAP1Q15042 981 aa10.57□□□□□ -0.72
NUP50-217ENST00000491860 LBX2Q6XYB7 198 aa10.57□□□□□ -0.72
NUP50-217ENST00000491860 GPATCH3Q96I76 525 aa10.57□□□□□ -0.72
NUP50-217ENST00000491860 P2RX7Q99572 595 aaKnown RBP10.57□□□□□ -0.72
NUP50-217ENST00000491860 KIAA1683Q9H0B3 1180 aa10.57□□□□□ -0.72
NUP50-217ENST00000491860 UNC93B1Q9H1C4 597 aa10.57□□□□□ -0.72
NUP50-217ENST00000491860 SH2D4AQ9H788 454 aa10.57□□□□□ -0.72
NUP50-217ENST00000491860 CWC22Q9HCG8 908 aaKnown RBP10.57□□□□□ -0.72
NUP50-217ENST00000491860 HMX1Q9NP08 348 aaPredicted RBP10.57□□□□□ -0.72
NUP50-217ENST00000491860 MCM9Q9NXL9 1143 aa10.57□□□□□ -0.72
NUP50-217ENST00000491860 RABGAP1Q9Y3P9 1069 aa10.57□□□□□ -0.72
NUP50-217ENST00000491860 DDX60LQ5H9U9 1706 aaKnown RBP10.57□□□□□ -0.72
NUP50-217ENST00000491860 RPTORQ8N122 1335 aa10.57□□□□□ -0.72
NUP50-217ENST00000491860 ZNF532Q9HCE3 1301 aa10.57□□□□□ -0.72
NUP50-217ENST00000491860 MYH7P12883 1935 aa10.56□□□□□ -0.72
NUP50-217ENST00000491860 APBB1O00213 710 aa10.56□□□□□ -0.72
NUP50-217ENST00000491860 SOX1O00570 391 aaPredicted RBP10.56□□□□□ -0.72
NUP50-217ENST00000491860 ELNP15502 786 aa10.56□□□□□ -0.72
NUP50-217ENST00000491860 BMP8BP34820 402 aa10.56□□□□□ -0.72
NUP50-217ENST00000491860 ERVK-9P63128 1117 aa10.56□□□□□ -0.72
NUP50-217ENST00000491860 ERVK-24P63145 666 aa10.56□□□□□ -0.72
NUP50-217ENST00000491860 UBE3CQ15386 1083 aa10.56□□□□□ -0.72
NUP50-217ENST00000491860 LRRFIP1Q32MZ4 808 aaKnown RBP10.56□□□□□ -0.72
NUP50-217ENST00000491860 TMEM179Q6ZVK1 233 aa10.56□□□□□ -0.72
NUP50-217ENST00000491860 HAUS7Q99871 368 aa10.56□□□□□ -0.72
NUP50-217ENST00000491860 EMILIN3Q9NT22 766 aa10.56□□□□□ -0.72
NUP50-217ENST00000491860 GJD2Q9UKL4 321 aa10.56□□□□□ -0.72
NUP50-217ENST00000491860 ALPK3Q96L96 1907 aa10.55□□□□□ -0.72
NUP50-217ENST00000491860 TCRBV5S4A2TA0A5A2 114 aa10.55□□□□□ -0.72
NUP50-217ENST00000491860 EVI5O60447 810 aa10.55□□□□□ -0.72
NUP50-217ENST00000491860 ADD2P35612 726 aa10.55□□□□□ -0.72
NUP50-217ENST00000491860 RGS2P41220 211 aa10.55□□□□□ -0.72
NUP50-217ENST00000491860 GABPAQ06546 454 aa10.55□□□□□ -0.72
NUP50-217ENST00000491860 CATSPERGQ6ZRH7 1159 aa10.55□□□□□ -0.72
NUP50-217ENST00000491860 SIRT2Q8IXJ6 389 aa10.55□□□□□ -0.72
NUP50-217ENST00000491860 LPAR1Q92633 364 aa10.55□□□□□ -0.72
NUP50-217ENST00000491860 CCDC17Q96LX7 622 aa10.55□□□□□ -0.72
NUP50-217ENST00000491860 DEFB118Q96PH6 123 aa10.55□□□□□ -0.72
NUP50-217ENST00000491860 CRISPLD2Q9H0B8 497 aa10.55□□□□□ -0.72
NUP50-217ENST00000491860 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.55□□□□□ -0.72
NUP50-217ENST00000491860 DCP1AQ9NPI6 582 aaPredicted RBP10.55□□□□□ -0.72
NUP50-217ENST00000491860 HOXC10Q9NYD6 342 aa10.55□□□□□ -0.72
NUP50-217ENST00000491860 NDUFB9Q9Y6M9 179 aa10.55□□□□□ -0.72
NUP50-217ENST00000491860 ZKSCAN1P17029 563 aaPredicted RBP10.54□□□□□ -0.72
NUP50-217ENST00000491860 SHMT1P34896 483 aa10.54□□□□□ -0.72
NUP50-217ENST00000491860 PLCD1P51178 756 aa10.54□□□□□ -0.72
NUP50-217ENST00000491860 JAG1P78504 1218 aa10.54□□□□□ -0.72
NUP50-217ENST00000491860 NECAB2Q7Z6G3 386 aa10.54□□□□□ -0.72
NUP50-217ENST00000491860 PLEKHH3Q7Z736 793 aa10.54□□□□□ -0.72
NUP50-217ENST00000491860 MB21D1Q8N884 522 aa10.54□□□□□ -0.72
NUP50-217ENST00000491860 LRCH3Q96II8 777 aa10.54□□□□□ -0.72
NUP50-217ENST00000491860 APBA2Q99767 749 aa10.54□□□□□ -0.72
NUP50-217ENST00000491860 GDF15Q99988 308 aa10.54□□□□□ -0.72
NUP50-217ENST00000491860 BOLA2Q9H3K6 86 aa10.54□□□□□ -0.72
NUP50-217ENST00000491860 ARHGEF10LQ9HCE6 1279 aa10.54□□□□□ -0.72
NUP50-217ENST00000491860 RBPJLQ9UBG7 517 aa10.54□□□□□ -0.72
NUP50-217ENST00000491860 IVNS1ABPQ9Y6Y0 642 aa10.54□□□□□ -0.72
NUP50-217ENST00000491860 CUL9Q8IWT3 2517 aa10.53□□□□□ -0.72
NUP50-217ENST00000491860 MPHOSPH10O00566 681 aaKnown RBP10.53□□□□□ -0.72
NUP50-217ENST00000491860 MBD4O95243 580 aa10.53□□□□□ -0.72
NUP50-217ENST00000491860 ZFYP08048 801 aaPredicted RBP10.53□□□□□ -0.72
NUP50-217ENST00000491860 VCAM1P19320 739 aa10.53□□□□□ -0.72
NUP50-217ENST00000491860 CYP2B6P20813 491 aa10.53□□□□□ -0.72
NUP50-217ENST00000491860 ZYXQ15942 572 aaKnown RBP10.53□□□□□ -0.72
NUP50-217ENST00000491860 GPR142Q7Z601 462 aa10.53□□□□□ -0.72
NUP50-217ENST00000491860 LCORLQ8N3X6 602 aa10.53□□□□□ -0.72
NUP50-217ENST00000491860 PAGR1Q9BTK6 254 aa10.53□□□□□ -0.72
NUP50-217ENST00000491860 TXNRD2Q9NNW7 524 aa10.53□□□□□ -0.72
NUP50-217ENST00000491860 ECHDC1Q9NTX5 307 aa10.53□□□□□ -0.72
NUP50-217ENST00000491860 ARPP21Q9UBL0 812 aaPredicted RBP10.53□□□□□ -0.72
NUP50-217ENST00000491860 PLXNB2O15031 1838 aa10.53□□□□□ -0.72
NUP50-217ENST00000491860 SLC15A5A6NIM6 579 aa10.52□□□□□ -0.73
NUP50-217ENST00000491860 STRNO43815 780 aa10.52□□□□□ -0.73
NUP50-217ENST00000491860 MSCO60682 206 aa10.52□□□□□ -0.73
NUP50-217ENST00000491860 PRKAR2AP13861 404 aaKnown RBP10.52□□□□□ -0.73
NUP50-217ENST00000491860 MAP2K5Q13163 448 aa10.52□□□□□ -0.73
NUP50-217ENST00000491860 COG2Q14746 738 aa10.52□□□□□ -0.73
NUP50-217ENST00000491860 SEPT2Q15019 361 aa10.52□□□□□ -0.73
NUP50-217ENST00000491860 MORN1Q5T089 497 aa10.52□□□□□ -0.73
NUP50-217ENST00000491860 MAP3K21Q5TCX8 1036 aa10.52□□□□□ -0.73
NUP50-217ENST00000491860 C12orf60Q5U649 245 aa10.52□□□□□ -0.73
NUP50-217ENST00000491860 MFSD14CQ5VZR4 134 aa10.52□□□□□ -0.73
NUP50-217ENST00000491860 GIMAP6Q6P9H5 292 aa10.52□□□□□ -0.73
NUP50-217ENST00000491860 SDR42E1Q8WUS8 393 aa10.52□□□□□ -0.73
NUP50-217ENST00000491860 TRIB2Q92519 343 aa10.52□□□□□ -0.73
NUP50-217ENST00000491860 USP6NLQ92738 828 aa10.52□□□□□ -0.73
NUP50-217ENST00000491860 RPAP3Q9H6T3 665 aaPredicted RBP10.52□□□□□ -0.73
NUP50-217ENST00000491860 ARMT1Q9H993 441 aa10.52□□□□□ -0.73
NUP50-217ENST00000491860 ZNF287Q9HBT7 754 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms