RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 USP17L19D6RCP7 530 aa17.69■□□□□ 0.42
SSR4-212ENST00000491833 USP17L20D6RJB6 530 aa17.69■□□□□ 0.42
SSR4-212ENST00000491833 CNMDO75829 334 aa17.69■□□□□ 0.42
SSR4-212ENST00000491833 CYP2E1P05181 493 aaPredicted RBP17.69■□□□□ 0.42
SSR4-212ENST00000491833 USP14P54578 494 aa17.69■□□□□ 0.42
SSR4-212ENST00000491833 USP17L24Q0WX57 530 aa17.69■□□□□ 0.42
SSR4-212ENST00000491833 POTEEQ6S8J3 1075 aa17.69■□□□□ 0.42
SSR4-212ENST00000491833 GUCD1Q96NT3 240 aa17.69■□□□□ 0.42
SSR4-212ENST00000491833 DBNDD2Q9BQY9 259 aa17.69■□□□□ 0.42
SSR4-212ENST00000491833 COL25A1Q9BXS0 654 aaPredicted RBP17.69■□□□□ 0.42
SSR4-212ENST00000491833 PRKAG2Q9UGJ0 569 aa17.69■□□□□ 0.42
SSR4-212ENST00000491833 DDX20Q9UHI6 824 aaKnown RBP17.69■□□□□ 0.42
SSR4-212ENST00000491833 IVNS1ABPQ9Y6Y0 642 aa17.69■□□□□ 0.42
SSR4-212ENST00000491833 SLC15A5A6NIM6 579 aa17.68■□□□□ 0.42
SSR4-212ENST00000491833 CNGA1P29973 690 aa17.68■□□□□ 0.42
SSR4-212ENST00000491833 OS9Q13438 667 aaPredicted RBP17.68■□□□□ 0.42
SSR4-212ENST00000491833 CERS3Q8IU89 383 aa17.68■□□□□ 0.42
SSR4-212ENST00000491833 LPAR1Q92633 364 aa17.68■□□□□ 0.42
SSR4-212ENST00000491833 FLRT1Q9NZU1 646 aa17.68■□□□□ 0.42
SSR4-212ENST00000491833 NDUFB9Q9Y6M9 179 aa17.68■□□□□ 0.42
SSR4-212ENST00000491833 ZNF236Q9UL36 1845 aa17.68■□□□□ 0.42
SSR4-212ENST00000491833 POTEB2H3BUK9 544 aa17.67■□□□□ 0.42
SSR4-212ENST00000491833 DNM1LO00429 736 aa17.67■□□□□ 0.42
SSR4-212ENST00000491833 TRIM27P14373 513 aa17.67■□□□□ 0.42
SSR4-212ENST00000491833 VCAM1P19320 739 aa17.67■□□□□ 0.42
SSR4-212ENST00000491833 PTPREP23469 700 aa17.67■□□□□ 0.42
SSR4-212ENST00000491833 ZAP70P43403 619 aa17.67■□□□□ 0.42
SSR4-212ENST00000491833 DYNLL1P63167 89 aaKnown RBP17.67■□□□□ 0.42
SSR4-212ENST00000491833 ATP2B2Q01814 1243 aa17.67■□□□□ 0.42
SSR4-212ENST00000491833 ZNF697Q5TEC3 545 aa17.67■□□□□ 0.42
SSR4-212ENST00000491833 LBX2Q6XYB7 198 aa17.67■□□□□ 0.42
SSR4-212ENST00000491833 ZNF512BQ96KM6 892 aaPredicted RBP17.67■□□□□ 0.42
SSR4-212ENST00000491833 UNC80Q8N2C7 3258 aa17.67■□□□□ 0.42
SSR4-212ENST00000491833 IPO8O15397 1037 aaKnown RBP17.66■□□□□ 0.42
SSR4-212ENST00000491833 HOXC6P09630 235 aa17.66■□□□□ 0.42
SSR4-212ENST00000491833 CYP7A1P22680 504 aa17.66■□□□□ 0.42
SSR4-212ENST00000491833 USP5P45974 858 aa17.66■□□□□ 0.42
SSR4-212ENST00000491833 ATN1P54259 1190 aaPredicted RBP17.66■□□□□ 0.42
SSR4-212ENST00000491833 RTP1P59025 263 aa17.66■□□□□ 0.42
SSR4-212ENST00000491833 GRB14Q14449 540 aa17.66■□□□□ 0.42
SSR4-212ENST00000491833 RAB3GAP1Q15042 981 aa17.66■□□□□ 0.42
SSR4-212ENST00000491833 TATDN1Q6P1N9 297 aa17.66■□□□□ 0.42
SSR4-212ENST00000491833 CATSPERGQ6ZRH7 1159 aa17.66■□□□□ 0.42
SSR4-212ENST00000491833 FAM161BQ96MY7 647 aa17.66■□□□□ 0.42
SSR4-212ENST00000491833 KIAA1683Q9H0B3 1180 aa17.66■□□□□ 0.42
SSR4-212ENST00000491833 EHD4Q9H223 541 aa17.66■□□□□ 0.42
SSR4-212ENST00000491833 PIH1D3Q9NQM4 214 aaKnown RBP17.66■□□□□ 0.42
SSR4-212ENST00000491833 SERPINB13Q9UIV8 391 aa17.66■□□□□ 0.42
SSR4-212ENST00000491833 A0A0C4DFX4 3053 aa17.66■□□□□ 0.42
SSR4-212ENST00000491833 SPDYE16A6NNV3 312 aaPredicted RBP17.64■□□□□ 0.41
SSR4-212ENST00000491833 IDH1O75874 414 aaKnown RBP17.64■□□□□ 0.41
SSR4-212ENST00000491833 CYBAP13498 195 aa17.64■□□□□ 0.41
SSR4-212ENST00000491833 CYP2C19P33261 490 aa17.64■□□□□ 0.41
SSR4-212ENST00000491833 POLA2Q14181 598 aa17.64■□□□□ 0.41
SSR4-212ENST00000491833 ABCB5Q2M3G0 1257 aa17.64■□□□□ 0.41
SSR4-212ENST00000491833 MIGA1Q8NAN2 632 aa17.64■□□□□ 0.41
SSR4-212ENST00000491833 NPLOC4Q8TAT6 608 aa17.64■□□□□ 0.41
SSR4-212ENST00000491833 CABP5Q9NP86 173 aa17.64■□□□□ 0.41
SSR4-212ENST00000491833 BTBD7Q9P203 1132 aa17.64■□□□□ 0.41
SSR4-212ENST00000491833 NAV1Q8NEY1 1877 aa17.64■□□□□ 0.41
SSR4-212ENST00000491833 RLFQ13129 1914 aa17.64■□□□□ 0.41
SSR4-212ENST00000491833 A0A0G2JMZ2 1700 aa17.64■□□□□ 0.41
SSR4-212ENST00000491833 KBTBD13C9JR72 458 aa17.63■□□□□ 0.41
SSR4-212ENST00000491833 CERKLQ49MI3 558 aaPredicted RBP17.63■□□□□ 0.41
SSR4-212ENST00000491833 TTC6Q86TZ1 520 aa17.63■□□□□ 0.41
SSR4-212ENST00000491833 FRAT1Q92837 279 aaPredicted RBP17.63■□□□□ 0.41
SSR4-212ENST00000491833 CLUAP1Q96AJ1 413 aa17.63■□□□□ 0.41
SSR4-212ENST00000491833 RPAP3Q9H6T3 665 aaPredicted RBP17.63■□□□□ 0.41
SSR4-212ENST00000491833 TNNQ9UQP3 1299 aa17.63■□□□□ 0.41
SSR4-212ENST00000491833 ATP11BQ9Y2G3 1177 aa17.63■□□□□ 0.41
SSR4-212ENST00000491833 ACER1Q8TDN7 264 aa17.62■□□□□ 0.41
SSR4-212ENST00000491833 DBNLQ9UJU6 430 aaKnown RBP17.62■□□□□ 0.41
SSR4-212ENST00000491833 SURF6O75683 361 aaKnown RBP17.61■□□□□ 0.41
SSR4-212ENST00000491833 GJC2Q5T442 439 aaPredicted RBP17.61■□□□□ 0.41
SSR4-212ENST00000491833 OLFML2BQ68BL8 750 aa17.61■□□□□ 0.41
SSR4-212ENST00000491833 DPP9Q86TI2 863 aa17.61■□□□□ 0.41
SSR4-212ENST00000491833 MAGEB6Q8N7X4 407 aa17.61■□□□□ 0.41
SSR4-212ENST00000491833 ARRDC4Q8NCT1 418 aa17.61■□□□□ 0.41
SSR4-212ENST00000491833 TRPV1Q8NER1 839 aa17.61■□□□□ 0.41
SSR4-212ENST00000491833 SSH3Q8TE77 659 aa17.61■□□□□ 0.41
SSR4-212ENST00000491833 PRDM5Q9NQX1 630 aaPredicted RBP17.61■□□□□ 0.41
SSR4-212ENST00000491833 TLR7Q9NYK1 1049 aaKnown RBP17.61■□□□□ 0.41
SSR4-212ENST00000491833 ADORA2AP29274 412 aa17.6■□□□□ 0.41
SSR4-212ENST00000491833 SHMT1P34896 483 aa17.6■□□□□ 0.41
SSR4-212ENST00000491833 TMED8Q6PL24 325 aaPredicted RBP17.6■□□□□ 0.41
SSR4-212ENST00000491833 IGHA2P01877 340 aa17.59■□□□□ 0.41
SSR4-212ENST00000491833 MAP3K12Q12852 859 aa17.59■□□□□ 0.41
SSR4-212ENST00000491833 SLC39A5Q6ZMH5 540 aa17.59■□□□□ 0.41
SSR4-212ENST00000491833 TMEM57Q8N5G2 664 aa17.59■□□□□ 0.41
SSR4-212ENST00000491833 MOV10L1Q9BXT6 1211 aaKnown RBP17.59■□□□□ 0.41
SSR4-212ENST00000491833 CCDC8Q9H0W5 538 aaPredicted RBP17.59■□□□□ 0.41
SSR4-212ENST00000491833 SEPT4O43236 478 aa17.58■□□□□ 0.4
SSR4-212ENST00000491833 STRNO43815 780 aa17.58■□□□□ 0.4
SSR4-212ENST00000491833 BCAR3O75815 825 aa17.58■□□□□ 0.4
SSR4-212ENST00000491833 MYCNP04198 464 aaPredicted RBP17.58■□□□□ 0.4
SSR4-212ENST00000491833 ATP8B2P98198 1209 aa17.58■□□□□ 0.4
SSR4-212ENST00000491833 SHHQ15465 462 aa17.58■□□□□ 0.4
SSR4-212ENST00000491833 TRIM60Q495X7 471 aa17.58■□□□□ 0.4
SSR4-212ENST00000491833 C9orf50Q5SZB4 431 aa17.58■□□□□ 0.4
SSR4-212ENST00000491833 SHCBP1Q8NEM2 672 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms