RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 PLCD1P51178 756 aa13.33□□□□□ -0.28
TMEM39A-211ENST00000491685 HERVK_113P62684 666 aa13.33□□□□□ -0.28
TMEM39A-211ENST00000491685 ANKRD45Q5TZF3 282 aa13.33□□□□□ -0.28
TMEM39A-211ENST00000491685 TMED8Q6PL24 325 aaPredicted RBP13.33□□□□□ -0.28
TMEM39A-211ENST00000491685 DEFB118Q96PH6 123 aa13.33□□□□□ -0.28
TMEM39A-211ENST00000491685 DNAJC2Q99543 621 aaKnown RBP13.33□□□□□ -0.28
TMEM39A-211ENST00000491685 HTATIP2Q9BUP3 242 aa13.33□□□□□ -0.28
TMEM39A-211ENST00000491685 EHD4Q9H223 541 aa13.33□□□□□ -0.28
TMEM39A-211ENST00000491685 LAMA3Q16787 3333 aa13.33□□□□□ -0.28
TMEM39A-211ENST00000491685 ZNF532Q9HCE3 1301 aa13.33□□□□□ -0.28
TMEM39A-211ENST00000491685 CUL9Q8IWT3 2517 aa13.32□□□□□ -0.28
TMEM39A-211ENST00000491685 MAGEB6P1A0A0J9YX57 407 aa13.32□□□□□ -0.28
TMEM39A-211ENST00000491685 GOLIM4O00461 696 aa13.32□□□□□ -0.28
TMEM39A-211ENST00000491685 GUCY1A2P33402 732 aa13.32□□□□□ -0.28
TMEM39A-211ENST00000491685 Q3C1V9 767 aa13.32□□□□□ -0.28
TMEM39A-211ENST00000491685 LCORLQ8N3X6 602 aa13.32□□□□□ -0.28
TMEM39A-211ENST00000491685 ACER1Q8TDN7 264 aa13.32□□□□□ -0.28
TMEM39A-211ENST00000491685 DIS3LQ8TF46 1054 aaKnown RBP13.32□□□□□ -0.28
TMEM39A-211ENST00000491685 TRIB2Q92519 343 aa13.32□□□□□ -0.28
TMEM39A-211ENST00000491685 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.32□□□□□ -0.28
TMEM39A-211ENST00000491685 PORCNQ9H237 461 aa13.32□□□□□ -0.28
TMEM39A-211ENST00000491685 RBPJLQ9UBG7 517 aa13.32□□□□□ -0.28
TMEM39A-211ENST00000491685 SERPINB13Q9UIV8 391 aa13.32□□□□□ -0.28
TMEM39A-211ENST00000491685 C19orf81C9J6K1 198 aa13.31□□□□□ -0.28
TMEM39A-211ENST00000491685 SMIM22K7EJ46 135 aa13.31□□□□□ -0.28
TMEM39A-211ENST00000491685 CNMDO75829 334 aa13.31□□□□□ -0.28
TMEM39A-211ENST00000491685 CYP2D6P10635 497 aa13.31□□□□□ -0.28
TMEM39A-211ENST00000491685 SLC9C2Q5TAH2 1124 aa13.31□□□□□ -0.28
TMEM39A-211ENST00000491685 USP17L2Q6R6M4 530 aa13.31□□□□□ -0.28
TMEM39A-211ENST00000491685 SDR42E1Q8WUS8 393 aa13.31□□□□□ -0.28
TMEM39A-211ENST00000491685 GPATCH3Q96I76 525 aa13.31□□□□□ -0.28
TMEM39A-211ENST00000491685 PAGR1Q9BTK6 254 aa13.31□□□□□ -0.28
TMEM39A-211ENST00000491685 CRISPLD2Q9H0B8 497 aa13.31□□□□□ -0.28
TMEM39A-211ENST00000491685 GINM1Q9NU53 330 aa13.31□□□□□ -0.28
TMEM39A-211ENST00000491685 COL11A1P12107 1806 aaPredicted RBP13.31□□□□□ -0.28
TMEM39A-211ENST00000491685 HMGCRP04035 888 aa13.3□□□□□ -0.28
TMEM39A-211ENST00000491685 CYP2B6P20813 491 aa13.3□□□□□ -0.28
TMEM39A-211ENST00000491685 ERVK-9P63128 1117 aa13.3□□□□□ -0.28
TMEM39A-211ENST00000491685 ERVK-24P63145 666 aa13.3□□□□□ -0.28
TMEM39A-211ENST00000491685 GABPAQ06546 454 aa13.3□□□□□ -0.28
TMEM39A-211ENST00000491685 RAB3GAP1Q15042 981 aa13.3□□□□□ -0.28
TMEM39A-211ENST00000491685 ABCB5Q2M3G0 1257 aa13.3□□□□□ -0.28
TMEM39A-211ENST00000491685 SLC44A5Q8NCS7 719 aa13.3□□□□□ -0.28
TMEM39A-211ENST00000491685 GPRC5AQ8NFJ5 357 aa13.3□□□□□ -0.28
TMEM39A-211ENST00000491685 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.3□□□□□ -0.28
TMEM39A-211ENST00000491685 C12orf42Q96LP6 360 aa13.3□□□□□ -0.28
TMEM39A-211ENST00000491685 FEZ1Q99689 392 aa13.3□□□□□ -0.28
TMEM39A-211ENST00000491685 NR2E3Q9Y5X4 410 aa13.3□□□□□ -0.28
TMEM39A-211ENST00000491685 GREB1LQ9C091 1923 aaPredicted RBP13.29□□□□□ -0.28
TMEM39A-211ENST00000491685 PRKAB2O43741 272 aa13.29□□□□□ -0.28
TMEM39A-211ENST00000491685 SMARCA5O60264 1052 aaPredicted RBP13.29□□□□□ -0.28
TMEM39A-211ENST00000491685 IGHDP01880 384 aa13.29□□□□□ -0.28
TMEM39A-211ENST00000491685 TFRCP02786 760 aaKnown RBP13.29□□□□□ -0.28
TMEM39A-211ENST00000491685 CAPN2P17655 700 aa13.29□□□□□ -0.28
TMEM39A-211ENST00000491685 VCAM1P19320 739 aa13.29□□□□□ -0.28
TMEM39A-211ENST00000491685 MNX1P50219 401 aaPredicted RBP13.29□□□□□ -0.28
TMEM39A-211ENST00000491685 TTF1Q15361 905 aaPredicted RBP13.29□□□□□ -0.28
TMEM39A-211ENST00000491685 CERKLQ49MI3 558 aaPredicted RBP13.29□□□□□ -0.28
TMEM39A-211ENST00000491685 TTC6Q86TZ1 520 aa13.29□□□□□ -0.28
TMEM39A-211ENST00000491685 CLEC10AQ8IUN9 316 aa13.29□□□□□ -0.28
TMEM39A-211ENST00000491685 CCDC136Q96JN2 1154 aa13.29□□□□□ -0.28
TMEM39A-211ENST00000491685 BOLA2Q9H3K6 86 aa13.29□□□□□ -0.28
TMEM39A-211ENST00000491685 ARMT1Q9H993 441 aa13.29□□□□□ -0.28
TMEM39A-211ENST00000491685 ZNF236Q9UL36 1845 aa13.29□□□□□ -0.28
TMEM39A-211ENST00000491685 A0A1W2PRG0 241 aa13.28□□□□□ -0.28
TMEM39A-211ENST00000491685 MBD4O95243 580 aa13.28□□□□□ -0.28
TMEM39A-211ENST00000491685 POLR3DP05423 398 aaPredicted RBP13.28□□□□□ -0.28
TMEM39A-211ENST00000491685 SEPT2Q15019 361 aa13.28□□□□□ -0.28
TMEM39A-211ENST00000491685 CCL14Q16627 93 aa13.28□□□□□ -0.28
TMEM39A-211ENST00000491685 GPR142Q7Z601 462 aa13.28□□□□□ -0.28
TMEM39A-211ENST00000491685 USP6NLQ92738 828 aa13.28□□□□□ -0.28
TMEM39A-211ENST00000491685 PAWRQ96IZ0 340 aaKnown RBP13.28□□□□□ -0.28
TMEM39A-211ENST00000491685 CRNKL1Q9BZJ0 848 aaKnown RBP13.28□□□□□ -0.28
TMEM39A-211ENST00000491685 KIAA1683Q9H0B3 1180 aa13.28□□□□□ -0.28
TMEM39A-211ENST00000491685 DCP1AQ9NPI6 582 aaPredicted RBP13.28□□□□□ -0.28
TMEM39A-211ENST00000491685 PAG1Q9NWQ8 432 aa13.28□□□□□ -0.28
TMEM39A-211ENST00000491685 MCM9Q9NXL9 1143 aa13.28□□□□□ -0.28
TMEM39A-211ENST00000491685 CYP2D7A0A087X1C5 515 aa13.27□□□□□ -0.29
TMEM39A-211ENST00000491685 ERC2O15083 957 aa13.27□□□□□ -0.29
TMEM39A-211ENST00000491685 PRKAR2AP13861 404 aaKnown RBP13.27□□□□□ -0.29
TMEM39A-211ENST00000491685 ADD2P35612 726 aa13.27□□□□□ -0.29
TMEM39A-211ENST00000491685 KIAA1755Q5JYT7 1200 aa13.27□□□□□ -0.29
TMEM39A-211ENST00000491685 MORN1Q5T089 497 aa13.27□□□□□ -0.29
TMEM39A-211ENST00000491685 MAP3K21Q5TCX8 1036 aa13.27□□□□□ -0.29
TMEM39A-211ENST00000491685 B4GALNT3Q6L9W6 998 aa13.27□□□□□ -0.29
TMEM39A-211ENST00000491685 CATSPERGQ6ZRH7 1159 aa13.27□□□□□ -0.29
TMEM39A-211ENST00000491685 SMC5Q8IY18 1101 aa13.27□□□□□ -0.29
TMEM39A-211ENST00000491685 DYNLL2Q96FJ2 89 aa13.27□□□□□ -0.29
TMEM39A-211ENST00000491685 NUDT12Q9BQG2 462 aa13.27□□□□□ -0.29
TMEM39A-211ENST00000491685 BTBD7Q9P203 1132 aa13.27□□□□□ -0.29
TMEM39A-211ENST00000491685 RPTORQ8N122 1335 aa13.27□□□□□ -0.29
TMEM39A-211ENST00000491685 SPDYE16A6NNV3 312 aaPredicted RBP13.26□□□□□ -0.29
TMEM39A-211ENST00000491685 USP17L15C9J2P7 530 aa13.26□□□□□ -0.29
TMEM39A-211ENST00000491685 USP17L13C9JLJ4 530 aa13.26□□□□□ -0.29
TMEM39A-211ENST00000491685 USP17L11C9JVI0 530 aa13.26□□□□□ -0.29
TMEM39A-211ENST00000491685 USP17L18D6R9N7 530 aa13.26□□□□□ -0.29
TMEM39A-211ENST00000491685 USP17L22D6RA61 530 aa13.26□□□□□ -0.29
TMEM39A-211ENST00000491685 USP17L17D6RBQ6 530 aa13.26□□□□□ -0.29
TMEM39A-211ENST00000491685 USP17L19D6RCP7 530 aa13.26□□□□□ -0.29
TMEM39A-211ENST00000491685 USP17L20D6RJB6 530 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms