RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 PTPDC1A2A3K4 754 aa13.92□□□□□ -0.18
SRGAP3-210ENST00000491467 CTDNEP1O95476 244 aa13.92□□□□□ -0.18
SRGAP3-210ENST00000491467 CYP7A1P22680 504 aa13.92□□□□□ -0.18
SRGAP3-210ENST00000491467 RPS12P25398 132 aaKnown RBP13.92□□□□□ -0.18
SRGAP3-210ENST00000491467 ANTXR2P58335 489 aa13.92□□□□□ -0.18
SRGAP3-210ENST00000491467 RESTQ13127 1097 aa13.92□□□□□ -0.18
SRGAP3-210ENST00000491467 GRAPQ13588 217 aa13.92□□□□□ -0.18
SRGAP3-210ENST00000491467 PPP2R5BQ15173 497 aa13.92□□□□□ -0.18
SRGAP3-210ENST00000491467 MFSD6Q6ZSS7 791 aa13.92□□□□□ -0.18
SRGAP3-210ENST00000491467 GRAPLQ8TC17 118 aaPredicted RBP13.92□□□□□ -0.18
SRGAP3-210ENST00000491467 STAG1Q8WVM7 1258 aa13.92□□□□□ -0.18
SRGAP3-210ENST00000491467 ZNF396Q96N95 335 aaPredicted RBP13.92□□□□□ -0.18
SRGAP3-210ENST00000491467 ATP6V0A2Q9Y487 856 aa13.92□□□□□ -0.18
SRGAP3-210ENST00000491467 SLC4A4Q9Y6R1 1079 aa13.92□□□□□ -0.18
SRGAP3-210ENST00000491467 KLF18A0A0U1RQI7 1052 aa13.91□□□□□ -0.18
SRGAP3-210ENST00000491467 JAK2O60674 1132 aa13.91□□□□□ -0.18
SRGAP3-210ENST00000491467 GADD45BO75293 160 aaPredicted RBP13.91□□□□□ -0.18
SRGAP3-210ENST00000491467 NF2P35240 595 aa13.91□□□□□ -0.18
SRGAP3-210ENST00000491467 GYG1P46976 350 aa13.91□□□□□ -0.18
SRGAP3-210ENST00000491467 NASPP49321 788 aaPredicted RBP13.91□□□□□ -0.18
SRGAP3-210ENST00000491467 CCDC173Q0VFZ6 552 aa13.91□□□□□ -0.18
SRGAP3-210ENST00000491467 PRKG1Q13976 671 aa13.91□□□□□ -0.18
SRGAP3-210ENST00000491467 SART3Q15020 963 aaKnown RBP13.91□□□□□ -0.18
SRGAP3-210ENST00000491467 UVSSAQ2YD98 709 aa13.91□□□□□ -0.18
SRGAP3-210ENST00000491467 TJAP1Q5JTD0 557 aa13.91□□□□□ -0.18
SRGAP3-210ENST00000491467 OTUD7BQ6GQQ9 843 aa13.91□□□□□ -0.18
SRGAP3-210ENST00000491467 TMC4Q7Z404 712 aa13.91□□□□□ -0.18
SRGAP3-210ENST00000491467 SPATA32Q96LK8 384 aa13.91□□□□□ -0.18
SRGAP3-210ENST00000491467 NBPF3Q9H094 633 aa13.91□□□□□ -0.18
SRGAP3-210ENST00000491467 TSPY26PQ9H489 355 aa13.91□□□□□ -0.18
SRGAP3-210ENST00000491467 RAI14Q9P0K7 980 aa13.91□□□□□ -0.18
SRGAP3-210ENST00000491467 ZSWIM8A7E2V4 1837 aa13.9□□□□□ -0.18
SRGAP3-210ENST00000491467 ECM29Q5VYK3 1845 aa13.9□□□□□ -0.18
SRGAP3-210ENST00000491467 GOLGA6L4A6NEF3 574 aa13.9□□□□□ -0.18
SRGAP3-210ENST00000491467 SNAP23O00161 211 aa13.9□□□□□ -0.18
SRGAP3-210ENST00000491467 SH2B2O14492 632 aaPredicted RBP13.9□□□□□ -0.18
SRGAP3-210ENST00000491467 CPLX1O14810 134 aa13.9□□□□□ -0.18
SRGAP3-210ENST00000491467 FIBPO43427 364 aa13.9□□□□□ -0.18
SRGAP3-210ENST00000491467 FARP2O94887 1054 aaPredicted RBP13.9□□□□□ -0.18
SRGAP3-210ENST00000491467 GJA8P48165 433 aa13.9□□□□□ -0.18
SRGAP3-210ENST00000491467 TDO2P48775 406 aa13.9□□□□□ -0.18
SRGAP3-210ENST00000491467 CCT2P78371 535 aaKnown RBP13.9□□□□□ -0.18
SRGAP3-210ENST00000491467 SYNE3Q6ZMZ3 975 aa13.9□□□□□ -0.18
SRGAP3-210ENST00000491467 CERS3Q8IU89 383 aa13.9□□□□□ -0.18
SRGAP3-210ENST00000491467 IGDCC4Q8TDY8 1250 aa13.9□□□□□ -0.18
SRGAP3-210ENST00000491467 PPP1R9BQ96SB3 815 aa13.9□□□□□ -0.18
SRGAP3-210ENST00000491467 ARMT1Q9H993 441 aa13.9□□□□□ -0.18
SRGAP3-210ENST00000491467 GDPD2Q9HCC8 539 aa13.9□□□□□ -0.18
SRGAP3-210ENST00000491467 NSFL1CQ9UNZ2 370 aaKnown RBP13.9□□□□□ -0.18
SRGAP3-210ENST00000491467 HCN4Q9Y3Q4 1203 aa13.9□□□□□ -0.18
SRGAP3-210ENST00000491467 NID2Q14112 1375 aa13.9□□□□□ -0.18
SRGAP3-210ENST00000491467 POTEB2H3BUK9 544 aa13.89□□□□□ -0.19
SRGAP3-210ENST00000491467 FOXD4L6Q3SYB3 417 aaPredicted RBP13.89□□□□□ -0.19
SRGAP3-210ENST00000491467 FAM109BQ6ICB4 259 aaPredicted RBP13.89□□□□□ -0.19
SRGAP3-210ENST00000491467 FOXD4L3Q6VB84 417 aaPredicted RBP13.89□□□□□ -0.19
SRGAP3-210ENST00000491467 CHST3Q7LGC8 479 aa13.89□□□□□ -0.19
SRGAP3-210ENST00000491467 ARMC9Q7Z3E5 817 aa13.89□□□□□ -0.19
SRGAP3-210ENST00000491467 TBC1D10CQ8IV04 446 aa13.89□□□□□ -0.19
SRGAP3-210ENST00000491467 WDR66Q8TBY9 1149 aa13.89□□□□□ -0.19
SRGAP3-210ENST00000491467 CHAMP1Q96JM3 812 aa13.89□□□□□ -0.19
SRGAP3-210ENST00000491467 EPB41L4AQ9HCS5 686 aaPredicted RBP13.89□□□□□ -0.19
SRGAP3-210ENST00000491467 ABCF2Q9UG63 623 aa13.89□□□□□ -0.19
SRGAP3-210ENST00000491467 RCOR1Q9UKL0 485 aa13.89□□□□□ -0.19
SRGAP3-210ENST00000491467 BRPF3Q9ULD4 1205 aa13.89□□□□□ -0.19
SRGAP3-210ENST00000491467 NAP1L2Q9ULW6 460 aaPredicted RBP13.89□□□□□ -0.19
SRGAP3-210ENST00000491467 ARIH1Q9Y4X5 557 aaPredicted RBP13.89□□□□□ -0.19
SRGAP3-210ENST00000491467 XDHP47989 1333 aa13.89□□□□□ -0.19
SRGAP3-210ENST00000491467 LRRC37AA6NMS7 1700 aa13.88□□□□□ -0.19
SRGAP3-210ENST00000491467 CCDC196A0A1B0GTZ2 297 aa13.88□□□□□ -0.19
SRGAP3-210ENST00000491467 ERICH2A1L162 156 aa13.88□□□□□ -0.19
SRGAP3-210ENST00000491467 SYCE3A1L190 88 aa13.88□□□□□ -0.19
SRGAP3-210ENST00000491467 GOLGA8BA8MQT2 603 aa13.88□□□□□ -0.19
SRGAP3-210ENST00000491467 B4E1Z4 1266 aa13.88□□□□□ -0.19
SRGAP3-210ENST00000491467 BBOX1O75936 387 aa13.88□□□□□ -0.19
SRGAP3-210ENST00000491467 CYB5R4Q7L1T6 521 aa13.88□□□□□ -0.19
SRGAP3-210ENST00000491467 BRAPQ7Z569 592 aa13.88□□□□□ -0.19
SRGAP3-210ENST00000491467 TTC6Q86TZ1 520 aa13.88□□□□□ -0.19
SRGAP3-210ENST00000491467 LCORLQ8N3X6 602 aa13.88□□□□□ -0.19
SRGAP3-210ENST00000491467 LEO1Q8WVC0 666 aaPredicted RBP13.88□□□□□ -0.19
SRGAP3-210ENST00000491467 DDX11Q96FC9 970 aa13.88□□□□□ -0.19
SRGAP3-210ENST00000491467 DBNDD1Q9H9R9 158 aa13.88□□□□□ -0.19
SRGAP3-210ENST00000491467 ATP8A2Q9NTI2 1148 aa13.88□□□□□ -0.19
SRGAP3-210ENST00000491467 ZSWIM5Q9P217 1185 aa13.88□□□□□ -0.19
SRGAP3-210ENST00000491467 ORC3Q9UBD5 711 aaPredicted RBP13.88□□□□□ -0.19
SRGAP3-210ENST00000491467 ZMYND8Q9ULU4 1186 aaPredicted RBP13.88□□□□□ -0.19
SRGAP3-210ENST00000491467 STK36Q9NRP7 1315 aa13.88□□□□□ -0.19
SRGAP3-210ENST00000491467 ZBTB43O43298 467 aa13.87□□□□□ -0.19
SRGAP3-210ENST00000491467 GJB1P08034 283 aa13.87□□□□□ -0.19
SRGAP3-210ENST00000491467 FGRP09769 529 aa13.87□□□□□ -0.19
SRGAP3-210ENST00000491467 ATP2B4P23634 1241 aa13.87□□□□□ -0.19
SRGAP3-210ENST00000491467 METAP2P50579 478 aaKnown RBP eCLIP13.87□□□□□ -0.19
SRGAP3-210ENST00000491467 GSTO1P78417 241 aa13.87□□□□□ -0.19
SRGAP3-210ENST00000491467 PPARAQ07869 468 aa13.87□□□□□ -0.19
SRGAP3-210ENST00000491467 TMEM67Q5HYA8 995 aa13.87□□□□□ -0.19
SRGAP3-210ENST00000491467 APOA5Q6Q788 366 aa13.87□□□□□ -0.19
SRGAP3-210ENST00000491467 FERMT3Q86UX7 667 aa13.87□□□□□ -0.19
SRGAP3-210ENST00000491467 FAM43AQ8N2R8 423 aa13.87□□□□□ -0.19
SRGAP3-210ENST00000491467 WASF1Q92558 559 aa13.87□□□□□ -0.19
SRGAP3-210ENST00000491467 SLC10A4Q96EP9 437 aa13.87□□□□□ -0.19
SRGAP3-210ENST00000491467 C8orf76Q96K31 380 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms