RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 ZNF341Q9BYN7 854 aa25.53■■□□□ 1.68
VCPKMT-204ENST00000491402 LIMCH1Q9UPQ0 1083 aa25.53■■□□□ 1.68
VCPKMT-204ENST00000491402 IGKV6D-41A0A0C4DH26 115 aa25.52■■□□□ 1.68
VCPKMT-204ENST00000491402 CAP2P40123 477 aa25.52■■□□□ 1.68
VCPKMT-204ENST00000491402 APLP1P51693 650 aa25.52■■□□□ 1.68
VCPKMT-204ENST00000491402 APOBRQ0VD83 1088 aa25.52■■□□□ 1.68
VCPKMT-204ENST00000491402 CCDC178Q5BJE1 867 aa25.52■■□□□ 1.68
VCPKMT-204ENST00000491402 TMEM179Q6ZVK1 233 aa25.52■■□□□ 1.68
VCPKMT-204ENST00000491402 SGMS1Q86VZ5 419 aa25.52■■□□□ 1.68
VCPKMT-204ENST00000491402 TPCN1Q9ULQ1 816 aa25.52■■□□□ 1.68
VCPKMT-204ENST00000491402 TMEM88BA6NKF7 163 aa25.51■■□□□ 1.67
VCPKMT-204ENST00000491402 K7ELQ4 463 aaPredicted RBP25.51■■□□□ 1.67
VCPKMT-204ENST00000491402 GH2P01242 217 aa25.51■■□□□ 1.67
VCPKMT-204ENST00000491402 JAG1P78504 1218 aa25.51■■□□□ 1.67
VCPKMT-204ENST00000491402 BECN1Q14457 450 aa25.51■■□□□ 1.67
VCPKMT-204ENST00000491402 IFIT1BQ5T764 474 aaKnown RBP25.51■■□□□ 1.67
VCPKMT-204ENST00000491402 RCSD1Q6JBY9 416 aa25.51■■□□□ 1.67
VCPKMT-204ENST00000491402 TMTC2Q8N394 836 aa25.51■■□□□ 1.67
VCPKMT-204ENST00000491402 MYH4Q9Y623 1939 aa25.51■■□□□ 1.67
VCPKMT-204ENST00000491402 UBE2Q2LH0YL09 131 aa25.51■■□□□ 1.67
VCPKMT-204ENST00000491402 EVCP57679 992 aa25.51■■□□□ 1.67
VCPKMT-204ENST00000491402 DGKHQ86XP1 1220 aa25.51■■□□□ 1.67
VCPKMT-204ENST00000491402 CABP5Q9NP86 173 aa25.51■■□□□ 1.67
VCPKMT-204ENST00000491402 MTMR4Q9NYA4 1195 aa25.51■■□□□ 1.67
VCPKMT-204ENST00000491402 STX8Q9UNK0 236 aa25.51■■□□□ 1.67
VCPKMT-204ENST00000491402 DOCK1Q14185 1865 aa25.51■■□□□ 1.67
VCPKMT-204ENST00000491402 NFXL1Q6ZNB6 911 aa25.5■■□□□ 1.67
VCPKMT-204ENST00000491402 CLEC10AQ8IUN9 316 aa25.5■■□□□ 1.67
VCPKMT-204ENST00000491402 ZNF112Q9UJU3 913 aa25.5■■□□□ 1.67
VCPKMT-204ENST00000491402 BRPF3Q9ULD4 1205 aa25.5■■□□□ 1.67
VCPKMT-204ENST00000491402 GUCY1A2P33402 732 aa25.49■■□□□ 1.67
VCPKMT-204ENST00000491402 NOVP48745 357 aa25.49■■□□□ 1.67
VCPKMT-204ENST00000491402 SEPT2Q15019 361 aa25.49■■□□□ 1.67
VCPKMT-204ENST00000491402 ARMC9Q7Z3E5 817 aa25.49■■□□□ 1.67
VCPKMT-204ENST00000491402 ANKS1AQ92625 1134 aa25.49■■□□□ 1.67
VCPKMT-204ENST00000491402 KLRG1Q96E93 195 aa25.49■■□□□ 1.67
VCPKMT-204ENST00000491402 TMX3Q96JJ7 454 aa25.49■■□□□ 1.67
VCPKMT-204ENST00000491402 WRNIP1Q96S55 665 aa25.49■■□□□ 1.67
VCPKMT-204ENST00000491402 ZBTB21Q9ULJ3 1066 aa25.49■■□□□ 1.67
VCPKMT-204ENST00000491402 PAPPA2Q9BXP8 1791 aa25.49■■□□□ 1.67
VCPKMT-204ENST00000491402 OTOFQ9HC10 1997 aa25.49■■□□□ 1.67
VCPKMT-204ENST00000491402 KLF18A0A0U1RQI7 1052 aa25.49■■□□□ 1.67
VCPKMT-204ENST00000491402 CCDC69A6NI79 296 aa25.49■■□□□ 1.67
VCPKMT-204ENST00000491402 CTNND1O60716 968 aaKnown RBP25.49■■□□□ 1.67
VCPKMT-204ENST00000491402 FKBP1BP68106 108 aa25.49■■□□□ 1.67
VCPKMT-204ENST00000491402 ME3Q16798 604 aa25.49■■□□□ 1.67
VCPKMT-204ENST00000491402 KANSL2Q9H9L4 492 aa25.49■■□□□ 1.67
VCPKMT-204ENST00000491402 LARGE1O95461 756 aa25.48■■□□□ 1.67
VCPKMT-204ENST00000491402 INPP5BP32019 993 aa25.48■■□□□ 1.67
VCPKMT-204ENST00000491402 IREB2P48200 963 aaKnown RBP25.48■■□□□ 1.67
VCPKMT-204ENST00000491402 RAB3GAP1Q15042 981 aa25.48■■□□□ 1.67
VCPKMT-204ENST00000491402 APOA5Q6Q788 366 aa25.48■■□□□ 1.67
VCPKMT-204ENST00000491402 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.48■■□□□ 1.67
VCPKMT-204ENST00000491402 ABT1Q9ULW3 272 aaKnown RBP25.48■■□□□ 1.67
VCPKMT-204ENST00000491402 TTLL1O95922 423 aa25.47■■□□□ 1.67
VCPKMT-204ENST00000491402 ASNSP08243 561 aa25.47■■□□□ 1.67
VCPKMT-204ENST00000491402 ZSCAN31Q96LW9 406 aaPredicted RBP25.47■■□□□ 1.67
VCPKMT-204ENST00000491402 SLC12A7Q9Y666 1083 aa25.47■■□□□ 1.67
VCPKMT-204ENST00000491402 HUNKP57058 714 aa25.46■■□□□ 1.67
VCPKMT-204ENST00000491402 ICA1Q05084 483 aa25.46■■□□□ 1.67
VCPKMT-204ENST00000491402 MAP3K11Q16584 847 aa25.46■■□□□ 1.67
VCPKMT-204ENST00000491402 SAPCD2Q86UD0 394 aa25.46■■□□□ 1.67
VCPKMT-204ENST00000491402 ZNF274Q96GC6 653 aaPredicted RBP25.46■■□□□ 1.67
VCPKMT-204ENST00000491402 TMEM47Q9BQJ4 181 aa25.46■■□□□ 1.67
VCPKMT-204ENST00000491402 SH2B1Q9NRF2 756 aaPredicted RBP25.46■■□□□ 1.67
VCPKMT-204ENST00000491402 NAP1L2Q9ULW6 460 aaPredicted RBP25.46■■□□□ 1.67
VCPKMT-204ENST00000491402 GOLGA8BA8MQT2 603 aa25.46■■□□□ 1.67
VCPKMT-204ENST00000491402 PDIA3P30101 505 aaKnown RBP25.46■■□□□ 1.67
VCPKMT-204ENST00000491402 PPP4R3BQ5MIZ7 849 aa25.46■■□□□ 1.67
VCPKMT-204ENST00000491402 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.46■■□□□ 1.67
VCPKMT-204ENST00000491402 KAT14Q9H8E8 782 aa25.46■■□□□ 1.67
VCPKMT-204ENST00000491402 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.46■■□□□ 1.67
VCPKMT-204ENST00000491402 MAP3K9P80192 1104 aa25.45■■□□□ 1.66
VCPKMT-204ENST00000491402 HTRA3P83110 453 aa25.45■■□□□ 1.66
VCPKMT-204ENST00000491402 ZNF654Q8IZM8 581 aa25.45■■□□□ 1.66
VCPKMT-204ENST00000491402 ZKSCAN4Q969J2 545 aaPredicted RBP25.45■■□□□ 1.66
VCPKMT-204ENST00000491402 MYL10Q9BUA6 226 aa25.45■■□□□ 1.66
VCPKMT-204ENST00000491402 CREBZFQ9NS37 354 aa25.45■■□□□ 1.66
VCPKMT-204ENST00000491402 GINM1Q9NU53 330 aa25.45■■□□□ 1.66
VCPKMT-204ENST00000491402 TLL2Q9Y6L7 1015 aa25.45■■□□□ 1.66
VCPKMT-204ENST00000491402 TOP1P11387 765 aaKnown RBP25.44■■□□□ 1.66
VCPKMT-204ENST00000491402 STK3Q13188 491 aa25.44■■□□□ 1.66
VCPKMT-204ENST00000491402 LDLRAD1Q5T700 205 aa25.44■■□□□ 1.66
VCPKMT-204ENST00000491402 MICU3Q86XE3 530 aa25.44■■□□□ 1.66
VCPKMT-204ENST00000491402 SCYL3Q8IZE3 742 aa25.44■■□□□ 1.66
VCPKMT-204ENST00000491402 NYAP2Q9P242 653 aa25.44■■□□□ 1.66
VCPKMT-204ENST00000491402 CLIP2Q9UDT6 1046 aa25.44■■□□□ 1.66
VCPKMT-204ENST00000491402 EEF2P13639 858 aaKnown RBP25.44■■□□□ 1.66
VCPKMT-204ENST00000491402 SYNE3Q6ZMZ3 975 aa25.44■■□□□ 1.66
VCPKMT-204ENST00000491402 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.44■■□□□ 1.66
VCPKMT-204ENST00000491402 CATIPQ7Z7H3 387 aa25.44■■□□□ 1.66
VCPKMT-204ENST00000491402 RAB11FIP4Q86YS3 637 aa25.44■■□□□ 1.66
VCPKMT-204ENST00000491402 SIAH1Q8IUQ4 282 aa25.44■■□□□ 1.66
VCPKMT-204ENST00000491402 PNMA1Q8ND90 353 aa25.44■■□□□ 1.66
VCPKMT-204ENST00000491402 CLMNQ96JQ2 1002 aa25.44■■□□□ 1.66
VCPKMT-204ENST00000491402 HPS5Q9UPZ3 1129 aa25.44■■□□□ 1.66
VCPKMT-204ENST00000491402 ZBTB43O43298 467 aa25.43■■□□□ 1.66
VCPKMT-204ENST00000491402 HSPA6P17066 643 aa25.43■■□□□ 1.66
VCPKMT-204ENST00000491402 ATP2B2Q01814 1243 aa25.43■■□□□ 1.66
VCPKMT-204ENST00000491402 ANKRD13AQ8IZ07 590 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms