RNA–Protein interactions for RNA: ENST00000491160.1

PBX3-208, Transcript of PBX homeobox 3, humanhuman

TSL 5

Gene PBX3, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-208ENST00000491160 TSR3Q9UJK0 312 aaKnown RBP8.11□□□□□ -1.11
PBX3-208ENST00000491160 PNMA3Q9UL41 463 aa8.11□□□□□ -1.11
PBX3-208ENST00000491160 CHD7Q9P2D1 2997 aa8.1□□□□□ -1.11
PBX3-208ENST00000491160 ATAD5Q96QE3 1844 aa8.1□□□□□ -1.11
PBX3-208ENST00000491160 KIF16BQ96L93 1317 aa8.1□□□□□ -1.11
PBX3-208ENST00000491160 TRIM6-TRIM34B2RNG4 842 aa8.1□□□□□ -1.11
PBX3-208ENST00000491160 EYA2O00167 538 aa8.1□□□□□ -1.11
PBX3-208ENST00000491160 RFX5P48382 616 aaPredicted RBP8.1□□□□□ -1.11
PBX3-208ENST00000491160 HMGCS2P54868 508 aa8.1□□□□□ -1.11
PBX3-208ENST00000491160 MAP3K10Q02779 954 aa8.1□□□□□ -1.11
PBX3-208ENST00000491160 ATG9AQ7Z3C6 839 aa8.1□□□□□ -1.11
PBX3-208ENST00000491160 SIL1Q9H173 461 aa8.1□□□□□ -1.11
PBX3-208ENST00000491160 ASCC2Q9H1I8 757 aaPredicted RBP8.1□□□□□ -1.11
PBX3-208ENST00000491160 EMILIN3Q9NT22 766 aa8.1□□□□□ -1.11
PBX3-208ENST00000491160 LOC285556D6RIA3 1793 aa8.1□□□□□ -1.11
PBX3-208ENST00000491160 TRANK1O15050 2925 aa8.09□□□□□ -1.11
PBX3-208ENST00000491160 COL6A1P12109 1028 aa8.09□□□□□ -1.11
PBX3-208ENST00000491160 CCND3P30281 292 aaPredicted RBP8.09□□□□□ -1.11
PBX3-208ENST00000491160 BTDP43251 543 aa8.09□□□□□ -1.11
PBX3-208ENST00000491160 PHKA1P46020 1223 aa8.09□□□□□ -1.11
PBX3-208ENST00000491160 GCLCP48506 637 aaPredicted RBP8.09□□□□□ -1.11
PBX3-208ENST00000491160 CACNB2Q08289 660 aaPredicted RBP8.09□□□□□ -1.11
PBX3-208ENST00000491160 RRP1BQ14684 758 aaKnown RBP8.09□□□□□ -1.11
PBX3-208ENST00000491160 ATP2B3Q16720 1220 aa8.09□□□□□ -1.11
PBX3-208ENST00000491160 MAP3K21Q5TCX8 1036 aa8.09□□□□□ -1.11
PBX3-208ENST00000491160 WDR63Q8IWG1 891 aa8.09□□□□□ -1.11
PBX3-208ENST00000491160 PROCA1Q8NCQ7 364 aaPredicted RBP8.09□□□□□ -1.11
PBX3-208ENST00000491160 ZNF280CQ8ND82 737 aa8.09□□□□□ -1.11
PBX3-208ENST00000491160 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.09□□□□□ -1.11
PBX3-208ENST00000491160 ABCF2Q9UG63 623 aa8.09□□□□□ -1.11
PBX3-208ENST00000491160 RFX7Q2KHR2 1363 aa8.09□□□□□ -1.12
PBX3-208ENST00000491160 SALL1Q9NSC2 1324 aa8.08□□□□□ -1.12
PBX3-208ENST00000491160 GTPBP6O43824 516 aaPredicted RBP8.08□□□□□ -1.12
PBX3-208ENST00000491160 ADORA1P30542 326 aa8.08□□□□□ -1.12
PBX3-208ENST00000491160 CCL14Q16627 93 aa8.08□□□□□ -1.12
PBX3-208ENST00000491160 C6orf132Q5T0Z8 1188 aa8.08□□□□□ -1.12
PBX3-208ENST00000491160 DZIP1Q86YF9 867 aaKnown RBP8.08□□□□□ -1.12
PBX3-208ENST00000491160 P2RX7Q99572 595 aaKnown RBP8.08□□□□□ -1.12
PBX3-208ENST00000491160 CDX2Q99626 313 aaPredicted RBP8.08□□□□□ -1.12
PBX3-208ENST00000491160 SENP6Q9GZR1 1112 aaPredicted RBP8.08□□□□□ -1.12
PBX3-208ENST00000491160 USP44Q9H0E7 712 aa8.08□□□□□ -1.12
PBX3-208ENST00000491160 TXNRD2Q9NNW7 524 aa8.08□□□□□ -1.12
PBX3-208ENST00000491160 PRDM6Q9NQX0 595 aa8.08□□□□□ -1.12
PBX3-208ENST00000491160 GNL3LQ9NVN8 582 aaKnown RBP8.08□□□□□ -1.12
PBX3-208ENST00000491160 SEPT9Q9UHD8 586 aaPredicted RBP8.08□□□□□ -1.12
PBX3-208ENST00000491160 DENND2AQ9ULE3 1009 aa8.08□□□□□ -1.12
PBX3-208ENST00000491160 GAKO14976 1311 aa8.07□□□□□ -1.12
PBX3-208ENST00000491160 ZKSCAN1P17029 563 aaPredicted RBP8.07□□□□□ -1.12
PBX3-208ENST00000491160 RHBDL3P58872 404 aa8.07□□□□□ -1.12
PBX3-208ENST00000491160 PABPC4Q13310 644 aaKnown RBP eCLIP8.07□□□□□ -1.12
PBX3-208ENST00000491160 Q3C1V9 767 aa8.07□□□□□ -1.12
PBX3-208ENST00000491160 ZNF697Q5TEC3 545 aa8.07□□□□□ -1.12
PBX3-208ENST00000491160 FAM109BQ6ICB4 259 aaPredicted RBP8.07□□□□□ -1.12
PBX3-208ENST00000491160 NUDT12Q9BQG2 462 aa8.07□□□□□ -1.12
PBX3-208ENST00000491160 MORF4L1Q9UBU8 362 aa8.07□□□□□ -1.12
PBX3-208ENST00000491160 NDUFB9Q9Y6M9 179 aa8.07□□□□□ -1.12
PBX3-208ENST00000491160 FRMPD3Q5JV73 1810 aa8.07□□□□□ -1.12
PBX3-208ENST00000491160 COL2A1P02458 1487 aaPredicted RBP8.06□□□□□ -1.12
PBX3-208ENST00000491160 USP17L5A8MUK1 530 aa8.06□□□□□ -1.12
PBX3-208ENST00000491160 GFRA3O60609 400 aa8.06□□□□□ -1.12
PBX3-208ENST00000491160 CAP2P40123 477 aa8.06□□□□□ -1.12
PBX3-208ENST00000491160 TIMM10P62072 90 aa8.06□□□□□ -1.12
PBX3-208ENST00000491160 HERVK_113P62684 666 aa8.06□□□□□ -1.12
PBX3-208ENST00000491160 IRX3P78415 501 aaPredicted RBP8.06□□□□□ -1.12
PBX3-208ENST00000491160 JAG1P78504 1218 aa8.06□□□□□ -1.12
PBX3-208ENST00000491160 MECOMQ03112 1051 aa8.06□□□□□ -1.12
PBX3-208ENST00000491160 MTMR2Q13614 643 aa8.06□□□□□ -1.12
PBX3-208ENST00000491160 RASGRF1Q13972 1273 aa8.06□□□□□ -1.12
PBX3-208ENST00000491160 SHROOM1Q2M3G4 852 aaPredicted RBP8.06□□□□□ -1.12
PBX3-208ENST00000491160 ERICH6BQ5W0A0 696 aa8.06□□□□□ -1.12
PBX3-208ENST00000491160 CCDC102BQ68D86 513 aa8.06□□□□□ -1.12
PBX3-208ENST00000491160 TRAF7Q6Q0C0 670 aa8.06□□□□□ -1.12
PBX3-208ENST00000491160 GPRC5AQ8NFJ5 357 aa8.06□□□□□ -1.12
PBX3-208ENST00000491160 MAFAQ8NHW3 353 aaPredicted RBP8.06□□□□□ -1.12
PBX3-208ENST00000491160 ZNF384Q8TF68 577 aa8.06□□□□□ -1.12
PBX3-208ENST00000491160 MYLIPQ8WY64 445 aa8.06□□□□□ -1.12
PBX3-208ENST00000491160 LBHD1Q9BQE6 289 aaPredicted RBP8.06□□□□□ -1.12
PBX3-208ENST00000491160 OSBPL5Q9H0X9 879 aaPredicted RBP8.06□□□□□ -1.12
PBX3-208ENST00000491160 PORCNQ9H237 461 aa8.06□□□□□ -1.12
PBX3-208ENST00000491160 SEMA6BQ9H3T3 888 aa8.06□□□□□ -1.12
PBX3-208ENST00000491160 CEP126Q9P2H0 1117 aa8.06□□□□□ -1.12
PBX3-208ENST00000491160 RBPJLQ9UBG7 517 aa8.06□□□□□ -1.12
PBX3-208ENST00000491160 MROH7-TTC4A0A0A0MT08 1334 aa8.05□□□□□ -1.12
PBX3-208ENST00000491160 MAST2Q6P0Q8 1798 aa8.05□□□□□ -1.12
PBX3-208ENST00000491160 GPR75-ASB3A0A0A6YYF3 556 aa8.05□□□□□ -1.12
PBX3-208ENST00000491160 SEMA3EO15041 775 aa8.05□□□□□ -1.12
PBX3-208ENST00000491160 XRCC5P13010 732 aaKnown RBP8.05□□□□□ -1.12
PBX3-208ENST00000491160 PDE3AQ14432 1141 aa8.05□□□□□ -1.12
PBX3-208ENST00000491160 SHHQ15465 462 aa8.05□□□□□ -1.12
PBX3-208ENST00000491160 SH3D19Q5HYK7 790 aa8.05□□□□□ -1.12
PBX3-208ENST00000491160 C9orf50Q5SZB4 431 aa8.05□□□□□ -1.12
PBX3-208ENST00000491160 TBC1D9Q6ZT07 1266 aa8.05□□□□□ -1.12
PBX3-208ENST00000491160 GPR142Q7Z601 462 aa8.05□□□□□ -1.12
PBX3-208ENST00000491160 PACS2Q86VP3 889 aa8.05□□□□□ -1.12
PBX3-208ENST00000491160 CCAR1Q8IX12 1150 aaKnown RBP8.05□□□□□ -1.12
PBX3-208ENST00000491160 SLF2Q8IX21 1173 aa8.05□□□□□ -1.12
PBX3-208ENST00000491160 ZGPATQ8N5A5 531 aaKnown RBP8.05□□□□□ -1.12
PBX3-208ENST00000491160 USP6NLQ92738 828 aa8.05□□□□□ -1.12
PBX3-208ENST00000491160 PAGR1Q9BTK6 254 aa8.05□□□□□ -1.12
PBX3-208ENST00000491160 TTYH1Q9H313 450 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms