RNA–Protein interactions for RNA: ENST00000490869.1

UBA1-209, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2

Gene UBA1, Length 917 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-209ENST00000490869 SWAP70Q9UH65 585 aa13.15□□□□□ -0.3
UBA1-209ENST00000490869 GJD2Q9UKL4 321 aa13.15□□□□□ -0.3
UBA1-209ENST00000490869 USP17L15C9J2P7 530 aa13.14□□□□□ -0.31
UBA1-209ENST00000490869 USP17L13C9JLJ4 530 aa13.14□□□□□ -0.31
UBA1-209ENST00000490869 USP17L11C9JVI0 530 aa13.14□□□□□ -0.31
UBA1-209ENST00000490869 USP17L18D6R9N7 530 aa13.14□□□□□ -0.31
UBA1-209ENST00000490869 USP17L22D6RA61 530 aa13.14□□□□□ -0.31
UBA1-209ENST00000490869 USP17L17D6RBQ6 530 aa13.14□□□□□ -0.31
UBA1-209ENST00000490869 USP17L19D6RCP7 530 aa13.14□□□□□ -0.31
UBA1-209ENST00000490869 USP17L20D6RJB6 530 aa13.14□□□□□ -0.31
UBA1-209ENST00000490869 SGPL1O95470 568 aa13.14□□□□□ -0.31
UBA1-209ENST00000490869 VCAM1P19320 739 aa13.14□□□□□ -0.31
UBA1-209ENST00000490869 ERVK-9P63128 1117 aa13.14□□□□□ -0.31
UBA1-209ENST00000490869 ERVK-24P63145 666 aa13.14□□□□□ -0.31
UBA1-209ENST00000490869 USP17L24Q0WX57 530 aa13.14□□□□□ -0.31
UBA1-209ENST00000490869 Q3C1V9 767 aa13.14□□□□□ -0.31
UBA1-209ENST00000490869 CCAR1Q8IX12 1150 aaKnown RBP13.14□□□□□ -0.31
UBA1-209ENST00000490869 SLC44A5Q8NCS7 719 aa13.14□□□□□ -0.31
UBA1-209ENST00000490869 DYNLL2Q96FJ2 89 aa13.14□□□□□ -0.31
UBA1-209ENST00000490869 GPATCH3Q96I76 525 aa13.14□□□□□ -0.31
UBA1-209ENST00000490869 PDE4DIPQ5VU43 2346 aa13.13□□□□□ -0.31
UBA1-209ENST00000490869 CENPFP49454 3210 aa13.13□□□□□ -0.31
UBA1-209ENST00000490869 HMGCRP04035 888 aa13.13□□□□□ -0.31
UBA1-209ENST00000490869 CYP2B6P20813 491 aa13.13□□□□□ -0.31
UBA1-209ENST00000490869 MAPK4P31152 587 aa13.13□□□□□ -0.31
UBA1-209ENST00000490869 POTEEQ6S8J3 1075 aa13.13□□□□□ -0.31
UBA1-209ENST00000490869 CATSPERGQ6ZRH7 1159 aa13.13□□□□□ -0.31
UBA1-209ENST00000490869 TMEM179Q6ZVK1 233 aa13.13□□□□□ -0.31
UBA1-209ENST00000490869 AMOTL1Q8IY63 956 aa13.13□□□□□ -0.31
UBA1-209ENST00000490869 SOCS4Q8WXH5 440 aa13.13□□□□□ -0.31
UBA1-209ENST00000490869 DDRGK1Q96HY6 314 aa13.13□□□□□ -0.31
UBA1-209ENST00000490869 DEFB118Q96PH6 123 aa13.13□□□□□ -0.31
UBA1-209ENST00000490869 PUS7LQ9H0K6 701 aaKnown RBP13.13□□□□□ -0.31
UBA1-209ENST00000490869 RPAP3Q9H6T3 665 aaPredicted RBP13.13□□□□□ -0.31
UBA1-209ENST00000490869 PAK6Q9NQU5 681 aaPredicted RBP13.13□□□□□ -0.31
UBA1-209ENST00000490869 SLC4A4Q9Y6R1 1079 aa13.13□□□□□ -0.31
UBA1-209ENST00000490869 KIAA0100Q14667 2235 aaKnown RBP13.13□□□□□ -0.31
UBA1-209ENST00000490869 MYH7P12883 1935 aa13.13□□□□□ -0.31
UBA1-209ENST00000490869 PLXNB2O15031 1838 aa13.13□□□□□ -0.31
UBA1-209ENST00000490869 CYP2D7A0A087X1C5 515 aa13.12□□□□□ -0.31
UBA1-209ENST00000490869 USP17L12C9JPN9 530 aa13.12□□□□□ -0.31
UBA1-209ENST00000490869 USP17L21D6R901 530 aa13.12□□□□□ -0.31
UBA1-209ENST00000490869 FARP2O94887 1054 aaPredicted RBP13.12□□□□□ -0.31
UBA1-209ENST00000490869 TFRCP02786 760 aaKnown RBP13.12□□□□□ -0.31
UBA1-209ENST00000490869 RRP1P56182 461 aaKnown RBP13.12□□□□□ -0.31
UBA1-209ENST00000490869 C12orf60Q5U649 245 aa13.12□□□□□ -0.31
UBA1-209ENST00000490869 TSHZ3Q63HK5 1081 aa13.12□□□□□ -0.31
UBA1-209ENST00000490869 GPR142Q7Z601 462 aa13.12□□□□□ -0.31
UBA1-209ENST00000490869 UBE2Q1Q7Z7E8 422 aa13.12□□□□□ -0.31
UBA1-209ENST00000490869 NUDT12Q9BQG2 462 aa13.12□□□□□ -0.31
UBA1-209ENST00000490869 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.12□□□□□ -0.31
UBA1-209ENST00000490869 PORCNQ9H237 461 aa13.12□□□□□ -0.31
UBA1-209ENST00000490869 CWC22Q9HCG8 908 aaKnown RBP13.12□□□□□ -0.31
UBA1-209ENST00000490869 RABGAP1Q9Y3P9 1069 aa13.12□□□□□ -0.31
UBA1-209ENST00000490869 PCDHB15Q9Y5E8 787 aa13.12□□□□□ -0.31
UBA1-209ENST00000490869 A0A1W2PRG0 241 aa13.11□□□□□ -0.31
UBA1-209ENST00000490869 SMIM22K7EJ46 135 aa13.11□□□□□ -0.31
UBA1-209ENST00000490869 CNMDO75829 334 aa13.11□□□□□ -0.31
UBA1-209ENST00000490869 AKR1B1P15121 316 aa13.11□□□□□ -0.31
UBA1-209ENST00000490869 TRIM32Q13049 653 aa13.11□□□□□ -0.31
UBA1-209ENST00000490869 PLEKHH3Q7Z736 793 aa13.11□□□□□ -0.31
UBA1-209ENST00000490869 KBTBD3Q8NAB2 608 aa13.11□□□□□ -0.31
UBA1-209ENST00000490869 TRIB2Q92519 343 aa13.11□□□□□ -0.31
UBA1-209ENST00000490869 DPF3Q92784 378 aa13.11□□□□□ -0.31
UBA1-209ENST00000490869 HTATIP2Q9BUP3 242 aa13.11□□□□□ -0.31
UBA1-209ENST00000490869 BAZ2AQ9UIF9 1905 aaKnown RBP13.11□□□□□ -0.31
UBA1-209ENST00000490869 BRCA2P51587 3418 aa13.11□□□□□ -0.31
UBA1-209ENST00000490869 SPDYE16A6NNV3 312 aaPredicted RBP13.1□□□□□ -0.31
UBA1-209ENST00000490869 XRCC5P13010 732 aaKnown RBP13.1□□□□□ -0.31
UBA1-209ENST00000490869 CAPN2P17655 700 aa13.1□□□□□ -0.31
UBA1-209ENST00000490869 RGS2P41220 211 aa13.1□□□□□ -0.31
UBA1-209ENST00000490869 CDK8P49336 464 aa13.1□□□□□ -0.31
UBA1-209ENST00000490869 CCNA1P78396 465 aa13.1□□□□□ -0.31
UBA1-209ENST00000490869 CTR9Q6PD62 1173 aa13.1□□□□□ -0.31
UBA1-209ENST00000490869 LBX2Q6XYB7 198 aa13.1□□□□□ -0.31
UBA1-209ENST00000490869 C16orf86Q6ZW13 317 aa13.1□□□□□ -0.31
UBA1-209ENST00000490869 CLEC10AQ8IUN9 316 aa13.1□□□□□ -0.31
UBA1-209ENST00000490869 CCDC17Q96LX7 622 aa13.1□□□□□ -0.31
UBA1-209ENST00000490869 CRISPLD2Q9H0B8 497 aa13.1□□□□□ -0.31
UBA1-209ENST00000490869 ARHGEF10LQ9HCE6 1279 aa13.1□□□□□ -0.31
UBA1-209ENST00000490869 HMX1Q9NP08 348 aaPredicted RBP13.1□□□□□ -0.31
UBA1-209ENST00000490869 ARPP21Q9UBL0 812 aaPredicted RBP13.1□□□□□ -0.31
UBA1-209ENST00000490869 RPTORQ8N122 1335 aa13.1□□□□□ -0.31
UBA1-209ENST00000490869 DOCK3Q8IZD9 2030 aa13.1□□□□□ -0.31
UBA1-209ENST00000490869 MYH8P13535 1937 aa13.09□□□□□ -0.31
UBA1-209ENST00000490869 H0YGN5 161 aa13.09□□□□□ -0.31
UBA1-209ENST00000490869 ZKSCAN1P17029 563 aaPredicted RBP13.09□□□□□ -0.31
UBA1-209ENST00000490869 ICA1Q05084 483 aa13.09□□□□□ -0.31
UBA1-209ENST00000490869 HABP4Q5JVS0 413 aaKnown RBP13.09□□□□□ -0.31
UBA1-209ENST00000490869 MORN1Q5T089 497 aa13.09□□□□□ -0.31
UBA1-209ENST00000490869 WDR78Q5VTH9 848 aa13.09□□□□□ -0.31
UBA1-209ENST00000490869 TRMT44Q8IYL2 757 aaKnown RBP13.09□□□□□ -0.31
UBA1-209ENST00000490869 APPBP2Q92624 585 aa13.09□□□□□ -0.31
UBA1-209ENST00000490869 USP6NLQ92738 828 aa13.09□□□□□ -0.31
UBA1-209ENST00000490869 OSBP2Q969R2 916 aa13.09□□□□□ -0.31
UBA1-209ENST00000490869 STRBPQ96SI9 672 aaKnown RBP13.09□□□□□ -0.31
UBA1-209ENST00000490869 TANGO6Q9C0B7 1094 aa13.09□□□□□ -0.31
UBA1-209ENST00000490869 SH2D4AQ9H788 454 aa13.09□□□□□ -0.31
UBA1-209ENST00000490869 BTBD7Q9P203 1132 aa13.09□□□□□ -0.31
UBA1-209ENST00000490869 TTC41PQ6P2S7 1318 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms