RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 SALL1Q9NSC2 1324 aa9.15□□□□□ -0.94
CLDN1-202ENST00000490800 SPDYE5A6NIY4 337 aa9.15□□□□□ -0.94
CLDN1-202ENST00000490800 HRO43593 1189 aa9.15□□□□□ -0.94
CLDN1-202ENST00000490800 IFIT2P09913 472 aaKnown RBP9.15□□□□□ -0.94
CLDN1-202ENST00000490800 FDX1P10109 184 aa9.15□□□□□ -0.94
CLDN1-202ENST00000490800 SP3Q02447 781 aa9.15□□□□□ -0.94
CLDN1-202ENST00000490800 FUT2Q10981 343 aa9.15□□□□□ -0.94
CLDN1-202ENST00000490800 DCAF15Q66K64 600 aa9.15□□□□□ -0.94
CLDN1-202ENST00000490800 OTOP1Q7RTM1 612 aa9.15□□□□□ -0.94
CLDN1-202ENST00000490800 ERO1BQ86YB8 467 aa9.15□□□□□ -0.94
CLDN1-202ENST00000490800 ZFPM1Q8IX07 1006 aa9.15□□□□□ -0.94
CLDN1-202ENST00000490800 FAM43AQ8N2R8 423 aa9.15□□□□□ -0.94
CLDN1-202ENST00000490800 ANKK1Q8NFD2 765 aa9.15□□□□□ -0.94
CLDN1-202ENST00000490800 PI4K2BQ8TCG2 481 aa9.15□□□□□ -0.94
CLDN1-202ENST00000490800 CD99L2Q8TCZ2 262 aa9.15□□□□□ -0.94
CLDN1-202ENST00000490800 HOOK2Q96ED9 719 aa9.15□□□□□ -0.94
CLDN1-202ENST00000490800 ZNF341Q9BYN7 854 aa9.15□□□□□ -0.94
CLDN1-202ENST00000490800 CCDC8Q9H0W5 538 aaPredicted RBP9.15□□□□□ -0.94
CLDN1-202ENST00000490800 GPR108Q9NPR9 543 aa9.15□□□□□ -0.94
CLDN1-202ENST00000490800 TLR7Q9NYK1 1049 aaKnown RBP9.15□□□□□ -0.94
CLDN1-202ENST00000490800 ABCF2Q9UG63 623 aa9.15□□□□□ -0.94
CLDN1-202ENST00000490800 TTC41PQ6P2S7 1318 aa9.14□□□□□ -0.95
CLDN1-202ENST00000490800 SDSP20132 328 aa9.14□□□□□ -0.95
CLDN1-202ENST00000490800 INPP5BP32019 993 aa9.14□□□□□ -0.95
CLDN1-202ENST00000490800 CAP1Q01518 475 aa9.14□□□□□ -0.95
CLDN1-202ENST00000490800 RASGRF1Q13972 1273 aa9.14□□□□□ -0.95
CLDN1-202ENST00000490800 TAF1CQ15572 869 aaPredicted RBP9.14□□□□□ -0.95
CLDN1-202ENST00000490800 ZGPATQ8N5A5 531 aaKnown RBP9.14□□□□□ -0.95
CLDN1-202ENST00000490800 ERO1AQ96HE7 468 aa9.14□□□□□ -0.95
CLDN1-202ENST00000490800 ZMYND15Q9H091 742 aa9.14□□□□□ -0.95
CLDN1-202ENST00000490800 EFCC1Q9HA90 598 aa9.14□□□□□ -0.95
CLDN1-202ENST00000490800 ZFYVE28Q9HCC9 887 aa9.14□□□□□ -0.95
CLDN1-202ENST00000490800 ECHDC1Q9NTX5 307 aa9.14□□□□□ -0.95
CLDN1-202ENST00000490800 ZNF112Q9UJU3 913 aa9.14□□□□□ -0.95
CLDN1-202ENST00000490800 DBNLQ9UJU6 430 aaKnown RBP9.14□□□□□ -0.95
CLDN1-202ENST00000490800 PTPN22Q9Y2R2 807 aa9.14□□□□□ -0.95
CLDN1-202ENST00000490800 RBM19Q9Y4C8 960 aaKnown RBP9.14□□□□□ -0.95
CLDN1-202ENST00000490800 BTBD19C9JJ37 291 aa9.13□□□□□ -0.95
CLDN1-202ENST00000490800 GLRX3O76003 335 aaKnown RBP9.13□□□□□ -0.95
CLDN1-202ENST00000490800 CETPP11597 493 aa9.13□□□□□ -0.95
CLDN1-202ENST00000490800 PPATQ06203 517 aa9.13□□□□□ -0.95
CLDN1-202ENST00000490800 KMT5BQ4FZB7 885 aa9.13□□□□□ -0.95
CLDN1-202ENST00000490800 GORABQ5T7V8 394 aa9.13□□□□□ -0.95
CLDN1-202ENST00000490800 SPTY2D1Q68D10 685 aaPredicted RBP9.13□□□□□ -0.95
CLDN1-202ENST00000490800 TBC1D9Q6ZT07 1266 aa9.13□□□□□ -0.95
CLDN1-202ENST00000490800 DZIP1Q86YF9 867 aaKnown RBP9.13□□□□□ -0.95
CLDN1-202ENST00000490800 GPATCH3Q96I76 525 aa9.13□□□□□ -0.95
CLDN1-202ENST00000490800 DBNDD2Q9BQY9 259 aa9.13□□□□□ -0.95
CLDN1-202ENST00000490800 HMG20BQ9P0W2 317 aa9.13□□□□□ -0.95
CLDN1-202ENST00000490800 ERC2O15083 957 aa9.12□□□□□ -0.95
CLDN1-202ENST00000490800 CDC45O75419 566 aa9.12□□□□□ -0.95
CLDN1-202ENST00000490800 SLURP2P0DP57 97 aa9.12□□□□□ -0.95
CLDN1-202ENST00000490800 MECOMQ03112 1051 aa9.12□□□□□ -0.95
CLDN1-202ENST00000490800 PPIL2Q13356 520 aa9.12□□□□□ -0.95
CLDN1-202ENST00000490800 SNAPC2Q13487 334 aa9.12□□□□□ -0.95
CLDN1-202ENST00000490800 TUSC1Q2TAM9 212 aa9.12□□□□□ -0.95
CLDN1-202ENST00000490800 PI16Q6UXB8 463 aa9.12□□□□□ -0.95
CLDN1-202ENST00000490800 SH3BP5LQ7L8J4 393 aa9.12□□□□□ -0.95
CLDN1-202ENST00000490800 IDI2Q9BXS1 227 aa9.12□□□□□ -0.95
CLDN1-202ENST00000490800 PCDHGC3Q9UN70 934 aa9.12□□□□□ -0.95
CLDN1-202ENST00000490800 RPAP1Q9BWH6 1393 aaPredicted RBP9.12□□□□□ -0.95
CLDN1-202ENST00000490800 ARAP2Q8WZ64 1704 aa9.11□□□□□ -0.95
CLDN1-202ENST00000490800 GAKO14976 1311 aa9.11□□□□□ -0.95
CLDN1-202ENST00000490800 PDS5AQ29RF7 1337 aaKnown RBP9.11□□□□□ -0.95
CLDN1-202ENST00000490800 GPR75-ASB3A0A0A6YYF3 556 aa9.11□□□□□ -0.95
CLDN1-202ENST00000490800 DDTLA6NHG4 134 aaPredicted RBP9.11□□□□□ -0.95
CLDN1-202ENST00000490800 PHF20L1A8MW92 1017 aa9.11□□□□□ -0.95
CLDN1-202ENST00000490800 TLR2O60603 784 aa9.11□□□□□ -0.95
CLDN1-202ENST00000490800 LILRB3O75022 631 aa9.11□□□□□ -0.95
CLDN1-202ENST00000490800 ENTPD3O75355 529 aa9.11□□□□□ -0.95
CLDN1-202ENST00000490800 WDHD1O75717 1129 aaPredicted RBP9.11□□□□□ -0.95
CLDN1-202ENST00000490800 ATP5JP18859 108 aa9.11□□□□□ -0.95
CLDN1-202ENST00000490800 BTDP43251 543 aa9.11□□□□□ -0.95
CLDN1-202ENST00000490800 PPP2R2DQ66LE6 453 aa9.11□□□□□ -0.95
CLDN1-202ENST00000490800 ZSCAN29Q8IWY8 852 aaPredicted RBP9.11□□□□□ -0.95
CLDN1-202ENST00000490800 SPATA5Q8NB90 893 aa9.11□□□□□ -0.95
CLDN1-202ENST00000490800 ZNF384Q8TF68 577 aa9.11□□□□□ -0.95
CLDN1-202ENST00000490800 WNT2BQ93097 391 aa9.11□□□□□ -0.95
CLDN1-202ENST00000490800 DDX4Q9NQI0 724 aaKnown RBP9.11□□□□□ -0.95
CLDN1-202ENST00000490800 MROH7-TTC4A0A0A0MT08 1334 aa9.1□□□□□ -0.95
CLDN1-202ENST00000490800 AP1G2O75843 785 aa9.1□□□□□ -0.95
CLDN1-202ENST00000490800 MAP4K4O95819 1239 aaPredicted RBP9.1□□□□□ -0.95
CLDN1-202ENST00000490800 LDHCP07864 332 aa9.1□□□□□ -0.95
CLDN1-202ENST00000490800 ARID4AP29374 1257 aaPredicted RBP9.1□□□□□ -0.95
CLDN1-202ENST00000490800 MCAMP43121 646 aa9.1□□□□□ -0.95
CLDN1-202ENST00000490800 RHBDL3P58872 404 aa9.1□□□□□ -0.95
CLDN1-202ENST00000490800 MAP3K10Q02779 954 aa9.1□□□□□ -0.95
CLDN1-202ENST00000490800 PICALMQ13492 652 aa9.1□□□□□ -0.95
CLDN1-202ENST00000490800 ARHGEF6Q15052 776 aa9.1□□□□□ -0.95
CLDN1-202ENST00000490800 TMEM259Q4ZIN3 620 aa9.1□□□□□ -0.95
CLDN1-202ENST00000490800 NOL9Q5SY16 702 aaKnown RBP9.1□□□□□ -0.95
CLDN1-202ENST00000490800 RILPL2Q969X0 211 aa9.1□□□□□ -0.95
CLDN1-202ENST00000490800 NSUN4Q96CB9 384 aaKnown RBP9.1□□□□□ -0.95
CLDN1-202ENST00000490800 BOLA2Q9H3K6 86 aa9.1□□□□□ -0.95
CLDN1-202ENST00000490800 SNRKQ9NRH2 765 aa9.1□□□□□ -0.95
CLDN1-202ENST00000490800 RAI14Q9P0K7 980 aa9.1□□□□□ -0.95
CLDN1-202ENST00000490800 KCNH4Q9UQ05 1017 aa9.1□□□□□ -0.95
CLDN1-202ENST00000490800 ZHX2Q9Y6X8 837 aa9.1□□□□□ -0.95
CLDN1-202ENST00000490800 TNRC18O15417 2968 aaPredicted RBP9.09□□□□□ -0.95
CLDN1-202ENST00000490800 PDHXO00330 501 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms