RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 NFXL1Q6ZNB6 911 aa15.53■□□□□ 0.08
SNX12-205ENST00000490561 SCYL3Q8IZE3 742 aa15.53■□□□□ 0.08
SNX12-205ENST00000490561 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.53■□□□□ 0.082e-6■■□□□ 12.2
SNX12-205ENST00000490561 RBM46Q8TBY0 533 aaKnown RBP15.53■□□□□ 0.08
SNX12-205ENST00000490561 BRF1Q92994 677 aa15.53■□□□□ 0.08
SNX12-205ENST00000490561 CEP95Q96GE4 821 aa15.53■□□□□ 0.08
SNX12-205ENST00000490561 KAT14Q9H8E8 782 aa15.53■□□□□ 0.08
SNX12-205ENST00000490561 ARHGEF10LQ9HCE6 1279 aa15.53■□□□□ 0.08
SNX12-205ENST00000490561 PICK1Q9NRD5 415 aa15.53■□□□□ 0.08
SNX12-205ENST00000490561 SH2B1Q9NRF2 756 aaPredicted RBP15.53■□□□□ 0.08
SNX12-205ENST00000490561 IL17RBQ9NRM6 502 aa15.53■□□□□ 0.08
SNX12-205ENST00000490561 MTMR4Q9NYA4 1195 aa15.53■□□□□ 0.08
SNX12-205ENST00000490561 NYAP2Q9P242 653 aa15.53■□□□□ 0.08
SNX12-205ENST00000490561 LIMCH1Q9UPQ0 1083 aa15.53■□□□□ 0.08
SNX12-205ENST00000490561 CSADQ9Y600 493 aa15.53■□□□□ 0.08
SNX12-205ENST00000490561 GREB1LQ9C091 1923 aaPredicted RBP15.53■□□□□ 0.08
SNX12-205ENST00000490561 CALM1P0DP23 149 aa15.52■□□□□ 0.08
SNX12-205ENST00000490561 CALM2P0DP24 149 aa15.52■□□□□ 0.08
SNX12-205ENST00000490561 CALM3P0DP25 149 aa15.52■□□□□ 0.08
SNX12-205ENST00000490561 EVCP57679 992 aa15.52■□□□□ 0.08
SNX12-205ENST00000490561 TOB2Q14106 344 aaPredicted RBP15.52■□□□□ 0.08
SNX12-205ENST00000490561 RAB3GAP1Q15042 981 aa15.52■□□□□ 0.08
SNX12-205ENST00000490561 CATIPQ7Z7H3 387 aa15.52■□□□□ 0.08
SNX12-205ENST00000490561 ZNF274Q96GC6 653 aaPredicted RBP15.52■□□□□ 0.08
SNX12-205ENST00000490561 TCEANC2Q96MN5 208 aa15.52■□□□□ 0.08
SNX12-205ENST00000490561 ZKSCAN3Q9BRR0 538 aa15.52■□□□□ 0.08
SNX12-205ENST00000490561 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.52■□□□□ 0.08
SNX12-205ENST00000490561 LRRC2Q9BYS8 371 aa15.52■□□□□ 0.08
SNX12-205ENST00000490561 AS3MTQ9HBK9 375 aa15.52■□□□□ 0.08
SNX12-205ENST00000490561 STX8Q9UNK0 236 aa15.52■□□□□ 0.08
SNX12-205ENST00000490561 SLC12A7Q9Y666 1083 aa15.52■□□□□ 0.08
SNX12-205ENST00000490561 PAPPA2Q9BXP8 1791 aa15.52■□□□□ 0.07
SNX12-205ENST00000490561 USP17L5A8MUK1 530 aa15.51■□□□□ 0.07
SNX12-205ENST00000490561 DDAH1O94760 285 aa15.51■□□□□ 0.07
SNX12-205ENST00000490561 TOMM70O94826 608 aa15.51■□□□□ 0.07
SNX12-205ENST00000490561 SLURP2P0DP57 97 aa15.51■□□□□ 0.07
SNX12-205ENST00000490561 RRP1BQ14684 758 aaKnown RBP15.51■□□□□ 0.07
SNX12-205ENST00000490561 SEPT2Q15019 361 aa15.51■□□□□ 0.07
SNX12-205ENST00000490561 PPP2R5BQ15173 497 aa15.51■□□□□ 0.07
SNX12-205ENST00000490561 ANKRD13AQ8IZ07 590 aa15.51■□□□□ 0.07
SNX12-205ENST00000490561 C2orf69Q8N8R5 385 aa15.51■□□□□ 0.07
SNX12-205ENST00000490561 NKX2-3Q8TAU0 364 aa15.51■□□□□ 0.07
SNX12-205ENST00000490561 MKL1Q969V6 931 aa15.51■□□□□ 0.07
SNX12-205ENST00000490561 KLF18A0A0U1RQI7 1052 aa15.5■□□□□ 0.07
SNX12-205ENST00000490561 K7ELQ4 463 aaPredicted RBP15.5■□□□□ 0.07
SNX12-205ENST00000490561 TRAF5O00463 557 aa15.5■□□□□ 0.07
SNX12-205ENST00000490561 NMT2O60551 498 aa15.5■□□□□ 0.07
SNX12-205ENST00000490561 ITGBL1O95965 494 aaPredicted RBP15.5■□□□□ 0.07
SNX12-205ENST00000490561 FSTL1Q12841 308 aa15.5■□□□□ 0.07
SNX12-205ENST00000490561 COL9A3Q14050 684 aaPredicted RBP15.5■□□□□ 0.07
SNX12-205ENST00000490561 RCSD1Q6JBY9 416 aa15.5■□□□□ 0.07
SNX12-205ENST00000490561 MAP3K14Q99558 947 aa15.5■□□□□ 0.07
SNX12-205ENST00000490561 TMEM47Q9BQJ4 181 aa15.5■□□□□ 0.07
SNX12-205ENST00000490561 GBA2Q9HCG7 927 aaPredicted RBP15.5■□□□□ 0.07
SNX12-205ENST00000490561 DOCK1Q14185 1865 aa15.5■□□□□ 0.07
SNX12-205ENST00000490561 ZBTB43O43298 467 aa15.49■□□□□ 0.07
SNX12-205ENST00000490561 DHX16O60231 1041 aaKnown RBP15.49■□□□□ 0.07
SNX12-205ENST00000490561 CELF2O95319 508 aaKnown RBP15.49■□□□□ 0.07
SNX12-205ENST00000490561 INPP5BP32019 993 aa15.49■□□□□ 0.07
SNX12-205ENST00000490561 GUCY1A2P33402 732 aa15.49■□□□□ 0.07
SNX12-205ENST00000490561 APOBRQ0VD83 1088 aa15.49■□□□□ 0.07
SNX12-205ENST00000490561 PRKG1Q13976 671 aa15.49■□□□□ 0.07
SNX12-205ENST00000490561 APOA5Q6Q788 366 aa15.49■□□□□ 0.07
SNX12-205ENST00000490561 ZNF654Q8IZM8 581 aa15.49■□□□□ 0.07
SNX12-205ENST00000490561 ZNF784Q8NCA9 323 aaPredicted RBP15.49■□□□□ 0.07
SNX12-205ENST00000490561 PNMA1Q8ND90 353 aa15.49■□□□□ 0.07
SNX12-205ENST00000490561 WDR18Q9BV38 432 aa15.49■□□□□ 0.07
SNX12-205ENST00000490561 ZNF408Q9H9D4 720 aa15.49■□□□□ 0.07
SNX12-205ENST00000490561 CLIP2Q9UDT6 1046 aa15.49■□□□□ 0.07
SNX12-205ENST00000490561 NID2Q14112 1375 aa15.49■□□□□ 0.07
SNX12-205ENST00000490561 CCDC196A0A1B0GTZ2 297 aa15.48■□□□□ 0.07
SNX12-205ENST00000490561 GOLGA8BA8MQT2 603 aa15.48■□□□□ 0.07
SNX12-205ENST00000490561 PFKFB2O60825 505 aa15.48■□□□□ 0.07
SNX12-205ENST00000490561 EEF2P13639 858 aaKnown RBP15.48■□□□□ 0.07
SNX12-205ENST00000490561 KIF5BP33176 963 aa15.48■□□□□ 0.07
SNX12-205ENST00000490561 USP14P54578 494 aa15.48■□□□□ 0.07
SNX12-205ENST00000490561 ATP2B2Q01814 1243 aa15.48■□□□□ 0.07
SNX12-205ENST00000490561 VGLL4Q14135 290 aa15.48■□□□□ 0.07
SNX12-205ENST00000490561 LDLRAD1Q5T700 205 aa15.48■□□□□ 0.07
SNX12-205ENST00000490561 DLK2Q6UY11 383 aa15.48■□□□□ 0.07
SNX12-205ENST00000490561 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.48■□□□□ 0.07
SNX12-205ENST00000490561 GMCL1P1Q8NEA9 526 aa15.48■□□□□ 0.07
SNX12-205ENST00000490561 ZKSCAN4Q969J2 545 aaPredicted RBP15.48■□□□□ 0.07
SNX12-205ENST00000490561 SLKQ9H2G2 1235 aaPredicted RBP15.48■□□□□ 0.07
SNX12-205ENST00000490561 GOPCQ9HD26 462 aa15.48■□□□□ 0.07
SNX12-205ENST00000490561 TPCN1Q9ULQ1 816 aa15.48■□□□□ 0.07
SNX12-205ENST00000490561 NAP1L2Q9ULW6 460 aaPredicted RBP15.48■□□□□ 0.07
SNX12-205ENST00000490561 PASKQ96RG2 1323 aa15.47■□□□□ 0.07
SNX12-205ENST00000490561 CD2BP2O95400 341 aaKnown RBP15.47■□□□□ 0.07
SNX12-205ENST00000490561 PTPRAP18433 802 aa15.47■□□□□ 0.07
SNX12-205ENST00000490561 PDIA3P30101 505 aaKnown RBP15.47■□□□□ 0.07
SNX12-205ENST00000490561 METAP2P50579 478 aaKnown RBP eCLIP15.47■□□□□ 0.07
SNX12-205ENST00000490561 JAG1P78504 1218 aa15.47■□□□□ 0.07
SNX12-205ENST00000490561 CPLX2Q6PUV4 134 aaKnown RBP15.47■□□□□ 0.07
SNX12-205ENST00000490561 NOL8Q76FK4 1167 aaKnown RBP15.47■□□□□ 0.07
SNX12-205ENST00000490561 CTCFLQ8NI51 663 aaPredicted RBP15.47■□□□□ 0.07
SNX12-205ENST00000490561 TMX3Q96JJ7 454 aa15.47■□□□□ 0.07
SNX12-205ENST00000490561 GPHNQ9NQX3 736 aaPredicted RBP15.47■□□□□ 0.07
SNX12-205ENST00000490561 RBM28Q9NW13 759 aaKnown RBP15.47■□□□□ 0.07
SNX12-205ENST00000490561 DAXXQ9UER7 740 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms