RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 DDX3YO15523 660 aaKnown RBP6.38□□□□□ -1.39
CSTF1-205ENST00000490539 ITPKAP23677 461 aa6.38□□□□□ -1.39
CSTF1-205ENST00000490539 GRM2Q14416 872 aa6.38□□□□□ -1.39
CSTF1-205ENST00000490539 SPRED3Q2MJR0 410 aa6.38□□□□□ -1.39
CSTF1-205ENST00000490539 UVSSAQ2YD98 709 aa6.38□□□□□ -1.39
CSTF1-205ENST00000490539 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.38□□□□□ -1.39
CSTF1-205ENST00000490539 HDGFL2Q7Z4V5 671 aaPredicted RBP6.38□□□□□ -1.39
CSTF1-205ENST00000490539 DZIP1LQ8IYY4 767 aaKnown RBP6.38□□□□□ -1.39
CSTF1-205ENST00000490539 AGGF1Q8N302 714 aaeCLIP6.38□□□□□ -1.39
CSTF1-205ENST00000490539 DDX17Q92841 729 aaKnown RBP6.38□□□□□ -1.39
CSTF1-205ENST00000490539 CORO1BQ9BR76 489 aa6.38□□□□□ -1.39
CSTF1-205ENST00000490539 SSBP4Q9BWG4 385 aaPredicted RBP6.38□□□□□ -1.39
CSTF1-205ENST00000490539 SRCIN1Q9C0H9 1055 aa6.38□□□□□ -1.39
CSTF1-205ENST00000490539 CYP4F12Q9HCS2 524 aa6.38□□□□□ -1.39
CSTF1-205ENST00000490539 TERF2IPQ9NYB0 399 aa6.38□□□□□ -1.39
CSTF1-205ENST00000490539 KCNK4Q9NYG8 393 aa6.38□□□□□ -1.39
CSTF1-205ENST00000490539 PPP1R1BQ9UD71 204 aaPredicted RBP6.38□□□□□ -1.39
CSTF1-205ENST00000490539 TRPC5Q9UL62 973 aaPredicted RBP6.38□□□□□ -1.39
CSTF1-205ENST00000490539 BRD4O60885 1362 aaPredicted RBP6.38□□□□□ -1.39
CSTF1-205ENST00000490539 ARHGEF28Q8N1W1 1705 aaKnown RBP6.38□□□□□ -1.39
CSTF1-205ENST00000490539 FMN2Q9NZ56 1722 aa6.38□□□□□ -1.39
CSTF1-205ENST00000490539 ATRNO75882 1429 aa6.37□□□□□ -1.39
CSTF1-205ENST00000490539 SBNO1A3KN83 1393 aa6.37□□□□□ -1.39
CSTF1-205ENST00000490539 SBNO2Q9Y2G9 1366 aa6.37□□□□□ -1.39
CSTF1-205ENST00000490539 SPATA31A3Q5VYP0 1347 aa6.37□□□□□ -1.39
CSTF1-205ENST00000490539 PPP2R3AQ06190 1150 aa6.37□□□□□ -1.39
CSTF1-205ENST00000490539 FMR1Q06787 632 aaKnown RBP eCLIP6.37□□□□□ -1.39
CSTF1-205ENST00000490539 UBASH3BQ8TF42 649 aa6.37□□□□□ -1.39
CSTF1-205ENST00000490539 FOXD4L4Q8WXT5 416 aaPredicted RBP6.37□□□□□ -1.39
CSTF1-205ENST00000490539 FRMD6Q96NE9 622 aa6.37□□□□□ -1.39
CSTF1-205ENST00000490539 PUS7Q96PZ0 661 aaKnown RBP6.37□□□□□ -1.39
CSTF1-205ENST00000490539 BCO2Q9BYV7 579 aa6.37□□□□□ -1.39
CSTF1-205ENST00000490539 ZNF576Q9H609 170 aa6.37□□□□□ -1.39
CSTF1-205ENST00000490539 PCMTD2Q9NV79 361 aa6.37□□□□□ -1.39
CSTF1-205ENST00000490539 ITSN1Q15811 1721 aa6.36□□□□□ -1.39
CSTF1-205ENST00000490539 SHANK3Q9BYB0 1731 aa6.36□□□□□ -1.39
CSTF1-205ENST00000490539 PPIP5K1Q6PFW1 1433 aa6.36□□□□□ -1.39
CSTF1-205ENST00000490539 PNPLA6Q8IY17 1366 aa6.36□□□□□ -1.39
CSTF1-205ENST00000490539 USP47Q96K76 1375 aa6.36□□□□□ -1.39
CSTF1-205ENST00000490539 ACEP12821 1306 aa6.36□□□□□ -1.39
CSTF1-205ENST00000490539 ST20-MTHFSA0A0A6YYL1 179 aa6.36□□□□□ -1.39
CSTF1-205ENST00000490539 ZBTB7CA1YPR0 619 aa6.36□□□□□ -1.39
CSTF1-205ENST00000490539 MEGF11A6BM72 1044 aa6.36□□□□□ -1.39
CSTF1-205ENST00000490539 DHX15O43143 795 aaKnown RBP6.36□□□□□ -1.39
CSTF1-205ENST00000490539 ADAM11O75078 769 aa6.36□□□□□ -1.39
CSTF1-205ENST00000490539 WISP1O95388 367 aa6.36□□□□□ -1.39
CSTF1-205ENST00000490539 B3GALT4O96024 378 aa6.36□□□□□ -1.39
CSTF1-205ENST00000490539 FCGRTP55899 365 aa6.36□□□□□ -1.39
CSTF1-205ENST00000490539 COL19A1Q14993 1142 aa6.36□□□□□ -1.39
CSTF1-205ENST00000490539 EXOSC6Q5RKV6 272 aaKnown RBP6.36□□□□□ -1.39
CSTF1-205ENST00000490539 Q6ZS46 218 aa6.36□□□□□ -1.39
CSTF1-205ENST00000490539 KIAA1211Q6ZU35 1233 aa6.36□□□□□ -1.39
CSTF1-205ENST00000490539 C12orf50Q8NA57 414 aaPredicted RBP6.36□□□□□ -1.39
CSTF1-205ENST00000490539 UTP4Q969X6 686 aaKnown RBP6.36□□□□□ -1.39
CSTF1-205ENST00000490539 MEGF10Q96KG7 1140 aa6.36□□□□□ -1.39
CSTF1-205ENST00000490539 FMNL2Q96PY5 1086 aa6.36□□□□□ -1.39
CSTF1-205ENST00000490539 ABCB6Q9NP58 842 aa6.36□□□□□ -1.39
CSTF1-205ENST00000490539 QRICH2Q9H0J4 1663 aa6.36□□□□□ -1.39
CSTF1-205ENST00000490539 TNS3Q68CZ2 1445 aa6.35□□□□□ -1.39
CSTF1-205ENST00000490539 ANKRD33BA6NCL7 494 aa6.35□□□□□ -1.39
CSTF1-205ENST00000490539 GAS2O43903 313 aaKnown RBP6.35□□□□□ -1.39
CSTF1-205ENST00000490539 LDHBP07195 334 aaKnown RBP6.35□□□□□ -1.39
CSTF1-205ENST00000490539 ERCC3P19447 782 aa6.35□□□□□ -1.39
CSTF1-205ENST00000490539 GSTT1P30711 240 aa6.35□□□□□ -1.39
CSTF1-205ENST00000490539 AP3B2Q13367 1082 aa6.35□□□□□ -1.39
CSTF1-205ENST00000490539 POU4F3Q15319 338 aa6.35□□□□□ -1.39
CSTF1-205ENST00000490539 ZNF423Q2M1K9 1284 aa6.35□□□□□ -1.39
CSTF1-205ENST00000490539 EAPPQ56P03 285 aaPredicted RBP6.35□□□□□ -1.39
CSTF1-205ENST00000490539 SLC51AQ86UW1 340 aa6.35□□□□□ -1.39
CSTF1-205ENST00000490539 KRTAP4-7Q9BYR0 210 aa6.35□□□□□ -1.39
CSTF1-205ENST00000490539 GZF1Q9H116 711 aaPredicted RBP6.35□□□□□ -1.39
CSTF1-205ENST00000490539 RAD18Q9NS91 495 aa6.35□□□□□ -1.39
CSTF1-205ENST00000490539 AKAP2Q9Y2D5 859 aa6.35□□□□□ -1.39
CSTF1-205ENST00000490539 PXDNQ92626 1479 aa6.34□□□□□ -1.39
CSTF1-205ENST00000490539 PRR36Q9H6K5 1346 aa6.34□□□□□ -1.39
CSTF1-205ENST00000490539 TM4SF5O14894 197 aa6.34□□□□□ -1.39
CSTF1-205ENST00000490539 CCDC27Q2M243 656 aa6.34□□□□□ -1.39
CSTF1-205ENST00000490539 LCE1DQ5T752 114 aa6.34□□□□□ -1.39
CSTF1-205ENST00000490539 HGSNATQ68CP4 663 aa6.34□□□□□ -1.39
CSTF1-205ENST00000490539 NXPE4Q6UWF7 544 aa6.34□□□□□ -1.39
CSTF1-205ENST00000490539 PRR23CQ6ZRP0 262 aa6.34□□□□□ -1.39
CSTF1-205ENST00000490539 POLR3GLQ9BT43 218 aa6.34□□□□□ -1.39
CSTF1-205ENST00000490539 BCL11AQ9H165 835 aa6.34□□□□□ -1.39
CSTF1-205ENST00000490539 STOML1Q9UBI4 398 aa6.34□□□□□ -1.39
CSTF1-205ENST00000490539 GPN3Q9UHW5 284 aaPredicted RBP6.34□□□□□ -1.39
CSTF1-205ENST00000490539 CCDC9Q9Y3X0 531 aaKnown RBP6.34□□□□□ -1.39
CSTF1-205ENST00000490539 SAMM50Q9Y512 469 aa6.34□□□□□ -1.39
CSTF1-205ENST00000490539 ATP7BP35670 1465 aa6.34□□□□□ -1.4
CSTF1-205ENST00000490539 POLR3AO14802 1390 aaPredicted RBP6.33□□□□□ -1.4
CSTF1-205ENST00000490539 KTN1Q86UP2 1357 aaKnown RBP6.33□□□□□ -1.4
CSTF1-205ENST00000490539 TTC21AQ8NDW8 1320 aa6.33□□□□□ -1.4
CSTF1-205ENST00000490539 LOC100289279A0A1B0GTE1 492 aa6.33□□□□□ -1.4
CSTF1-205ENST00000490539 GSC2O15499 205 aa6.33□□□□□ -1.4
CSTF1-205ENST00000490539 P4HBP07237 508 aaKnown RBP6.33□□□□□ -1.4
CSTF1-205ENST00000490539 MAOBP27338 520 aa6.33□□□□□ -1.4
CSTF1-205ENST00000490539 IRAK1P51617 712 aa6.33□□□□□ -1.4
CSTF1-205ENST00000490539 PI16Q6UXB8 463 aa6.33□□□□□ -1.4
CSTF1-205ENST00000490539 KCNH5Q8NCM2 988 aa6.33□□□□□ -1.4
CSTF1-205ENST00000490539 SMG8Q8ND04 991 aaKnown RBP6.33□□□□□ -1.4
CSTF1-205ENST00000490539 GLIS3Q8NEA6 775 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms