RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 RCAN3Q9UKA8 241 aa13.63□□□□□ -0.23
DUBR-204ENST00000490441 ZYXQ15942 572 aaKnown RBP13.62□□□□□ -0.23
DUBR-204ENST00000490441 TATDN1Q6P1N9 297 aa13.62□□□□□ -0.23
DUBR-204ENST00000490441 SOCS4Q8WXH5 440 aa13.62□□□□□ -0.23
DUBR-204ENST00000490441 NUDT12Q9BQG2 462 aa13.62□□□□□ -0.23
DUBR-204ENST00000490441 RIOK1Q9BRS2 568 aaKnown RBP13.62□□□□□ -0.23
DUBR-204ENST00000490441 PAGR1Q9BTK6 254 aa13.62□□□□□ -0.23
DUBR-204ENST00000490441 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.62□□□□□ -0.23
DUBR-204ENST00000490441 PAK6Q9NQU5 681 aaPredicted RBP13.62□□□□□ -0.23
DUBR-204ENST00000490441 COLQQ9Y215 455 aaPredicted RBP13.62□□□□□ -0.23
DUBR-204ENST00000490441 NR2E3Q9Y5X4 410 aa13.62□□□□□ -0.23
DUBR-204ENST00000490441 ZNF532Q9HCE3 1301 aa13.62□□□□□ -0.23
DUBR-204ENST00000490441 MAPK4P31152 587 aa13.61□□□□□ -0.23
DUBR-204ENST00000490441 ERVK-9P63128 1117 aa13.61□□□□□ -0.23
DUBR-204ENST00000490441 ERVK-24P63145 666 aa13.61□□□□□ -0.23
DUBR-204ENST00000490441 UBE2Q1Q7Z7E8 422 aa13.61□□□□□ -0.23
DUBR-204ENST00000490441 TXNRD2Q9NNW7 524 aa13.61□□□□□ -0.23
DUBR-204ENST00000490441 EMILIN3Q9NT22 766 aa13.61□□□□□ -0.23
DUBR-204ENST00000490441 MCM9Q9NXL9 1143 aa13.61□□□□□ -0.23
DUBR-204ENST00000490441 GJD2Q9UKL4 321 aa13.61□□□□□ -0.23
DUBR-204ENST00000490441 USP17L15C9J2P7 530 aa13.6□□□□□ -0.23
DUBR-204ENST00000490441 USP17L13C9JLJ4 530 aa13.6□□□□□ -0.23
DUBR-204ENST00000490441 USP17L11C9JVI0 530 aa13.6□□□□□ -0.23
DUBR-204ENST00000490441 USP17L18D6R9N7 530 aa13.6□□□□□ -0.23
DUBR-204ENST00000490441 USP17L22D6RA61 530 aa13.6□□□□□ -0.23
DUBR-204ENST00000490441 USP17L17D6RBQ6 530 aa13.6□□□□□ -0.23
DUBR-204ENST00000490441 USP17L19D6RCP7 530 aa13.6□□□□□ -0.23
DUBR-204ENST00000490441 USP17L20D6RJB6 530 aa13.6□□□□□ -0.23
DUBR-204ENST00000490441 CYP2B6P20813 491 aa13.6□□□□□ -0.23
DUBR-204ENST00000490441 PLCD1P51178 756 aa13.6□□□□□ -0.23
DUBR-204ENST00000490441 CCNA1P78396 465 aa13.6□□□□□ -0.23
DUBR-204ENST00000490441 USP17L24Q0WX57 530 aa13.6□□□□□ -0.23
DUBR-204ENST00000490441 SIRT2Q8IXJ6 389 aa13.6□□□□□ -0.23
DUBR-204ENST00000490441 NAV1Q8NEY1 1877 aa13.6□□□□□ -0.23
DUBR-204ENST00000490441 C12orf42Q96LP6 360 aa13.6□□□□□ -0.23
DUBR-204ENST00000490441 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.6□□□□□ -0.23
DUBR-204ENST00000490441 KIAA1683Q9H0B3 1180 aa13.6□□□□□ -0.23
DUBR-204ENST00000490441 HMX1Q9NP08 348 aaPredicted RBP13.6□□□□□ -0.23
DUBR-204ENST00000490441 PAG1Q9NWQ8 432 aa13.6□□□□□ -0.23
DUBR-204ENST00000490441 CIZ1Q9ULV3 898 aaPredicted RBP13.6□□□□□ -0.23
DUBR-204ENST00000490441 RPTORQ8N122 1335 aa13.6□□□□□ -0.23
DUBR-204ENST00000490441 MPHOSPH10O00566 681 aaKnown RBP13.59□□□□□ -0.23
DUBR-204ENST00000490441 EVI5O60447 810 aa13.59□□□□□ -0.23
DUBR-204ENST00000490441 VCAM1P19320 739 aa13.59□□□□□ -0.23
DUBR-204ENST00000490441 SHMT1P34896 483 aa13.59□□□□□ -0.23
DUBR-204ENST00000490441 CHRDL2Q6WN34 429 aa13.59□□□□□ -0.23
DUBR-204ENST00000490441 TRMT44Q8IYL2 757 aaKnown RBP13.59□□□□□ -0.23
DUBR-204ENST00000490441 SDR42E1Q8WUS8 393 aa13.59□□□□□ -0.23
DUBR-204ENST00000490441 CRISPLD2Q9H0B8 497 aa13.59□□□□□ -0.23
DUBR-204ENST00000490441 BOLA2Q9H3K6 86 aa13.59□□□□□ -0.23
DUBR-204ENST00000490441 RBPJLQ9UBG7 517 aa13.59□□□□□ -0.23
DUBR-204ENST00000490441 RABGAP1Q9Y3P9 1069 aa13.59□□□□□ -0.23
DUBR-204ENST00000490441 PEX10O60683 326 aa13.58□□□□□ -0.24
DUBR-204ENST00000490441 GLRX3O76003 335 aaKnown RBP13.58□□□□□ -0.24
DUBR-204ENST00000490441 XRCC5P13010 732 aaKnown RBP13.58□□□□□ -0.24
DUBR-204ENST00000490441 ZKSCAN1P17029 563 aaPredicted RBP13.58□□□□□ -0.24
DUBR-204ENST00000490441 ATP5JP18859 108 aa13.58□□□□□ -0.24
DUBR-204ENST00000490441 RGS2P41220 211 aa13.58□□□□□ -0.24
DUBR-204ENST00000490441 WDR78Q5VTH9 848 aa13.58□□□□□ -0.24
DUBR-204ENST00000490441 GPR142Q7Z601 462 aa13.58□□□□□ -0.24
DUBR-204ENST00000490441 NECAB2Q7Z6G3 386 aa13.58□□□□□ -0.24
DUBR-204ENST00000490441 PLEKHH3Q7Z736 793 aa13.58□□□□□ -0.24
DUBR-204ENST00000490441 AMOTL1Q8IY63 956 aa13.58□□□□□ -0.24
DUBR-204ENST00000490441 LCORLQ8N3X6 602 aa13.58□□□□□ -0.24
DUBR-204ENST00000490441 ANKLE1Q8NAG6 615 aa13.58□□□□□ -0.24
DUBR-204ENST00000490441 ACER1Q8TDN7 264 aa13.58□□□□□ -0.24
DUBR-204ENST00000490441 TRIB2Q92519 343 aa13.58□□□□□ -0.24
DUBR-204ENST00000490441 EDC3Q96F86 508 aaKnown RBP13.58□□□□□ -0.24
DUBR-204ENST00000490441 DDRGK1Q96HY6 314 aa13.58□□□□□ -0.24
DUBR-204ENST00000490441 PAWRQ96IZ0 340 aaKnown RBP13.58□□□□□ -0.24
DUBR-204ENST00000490441 PORCNQ9H237 461 aa13.58□□□□□ -0.24
DUBR-204ENST00000490441 ARMT1Q9H993 441 aa13.58□□□□□ -0.24
DUBR-204ENST00000490441 DCP1AQ9NPI6 582 aaPredicted RBP13.58□□□□□ -0.24
DUBR-204ENST00000490441 TCRBV5S4A2TA0A5A2 114 aa13.57□□□□□ -0.24
DUBR-204ENST00000490441 PRKAR2AP13861 404 aaKnown RBP13.57□□□□□ -0.24
DUBR-204ENST00000490441 ADD2P35612 726 aa13.57□□□□□ -0.24
DUBR-204ENST00000490441 FXR1P51114 621 aaKnown RBP eCLIP13.57□□□□□ -0.24
DUBR-204ENST00000490441 GABPAQ06546 454 aa13.57□□□□□ -0.24
DUBR-204ENST00000490441 TRIM32Q13049 653 aa13.57□□□□□ -0.24
DUBR-204ENST00000490441 SEPT2Q15019 361 aa13.57□□□□□ -0.24
DUBR-204ENST00000490441 Q3C1V9 767 aa13.57□□□□□ -0.24
DUBR-204ENST00000490441 CATSPERGQ6ZRH7 1159 aa13.57□□□□□ -0.24
DUBR-204ENST00000490441 APBA2Q99767 749 aa13.57□□□□□ -0.24
DUBR-204ENST00000490441 HAUS7Q99871 368 aa13.57□□□□□ -0.24
DUBR-204ENST00000490441 LRRCC1Q9C099 1032 aa13.57□□□□□ -0.24
DUBR-204ENST00000490441 RPAP3Q9H6T3 665 aaPredicted RBP13.57□□□□□ -0.24
DUBR-204ENST00000490441 SWAP70Q9UH65 585 aa13.57□□□□□ -0.24
DUBR-204ENST00000490441 DDX60LQ5H9U9 1706 aaKnown RBP13.56□□□□□ -0.24
DUBR-204ENST00000490441 MBD4O95243 580 aa13.56□□□□□ -0.24
DUBR-204ENST00000490441 ZSCAN25Q6NSZ9 544 aa13.56□□□□□ -0.24
DUBR-204ENST00000490441 TMEM179Q6ZVK1 233 aa13.56□□□□□ -0.24
DUBR-204ENST00000490441 ATP8A2Q9NTI2 1148 aa13.56□□□□□ -0.24
DUBR-204ENST00000490441 IVNS1ABPQ9Y6Y0 642 aa13.56□□□□□ -0.24
DUBR-204ENST00000490441 PLXNB2O15031 1838 aa13.55□□□□□ -0.24
DUBR-204ENST00000490441 CYP2D6P10635 497 aa13.55□□□□□ -0.24
DUBR-204ENST00000490441 GUCY1A2P33402 732 aa13.55□□□□□ -0.24
DUBR-204ENST00000490441 MORN1Q5T089 497 aa13.55□□□□□ -0.24
DUBR-204ENST00000490441 MAP3K21Q5TCX8 1036 aa13.55□□□□□ -0.24
DUBR-204ENST00000490441 DIS3LQ8TF46 1054 aaKnown RBP13.55□□□□□ -0.24
DUBR-204ENST00000490441 TANGO6Q9C0B7 1094 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms