RNA–Protein interactions for RNA: ENST00000490231.5

NUP58-213, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-213ENST00000490231 GPR142Q7Z601 462 aa19.02■□□□□ 0.64
NUP58-213ENST00000490231 CCAR1Q8IX12 1150 aaKnown RBP19.02■□□□□ 0.64
NUP58-213ENST00000490231 DIS3LQ8TF46 1054 aaKnown RBP19.02■□□□□ 0.64
NUP58-213ENST00000490231 PAGR1Q9BTK6 254 aa19.02■□□□□ 0.64
NUP58-213ENST00000490231 PORCNQ9H237 461 aa19.02■□□□□ 0.64
NUP58-213ENST00000490231 CABP5Q9NP86 173 aa19.02■□□□□ 0.64
NUP58-213ENST00000490231 RABGAP1Q9Y3P9 1069 aa19.02■□□□□ 0.64
NUP58-213ENST00000490231 PLXNB2O15031 1838 aa19.02■□□□□ 0.63
NUP58-213ENST00000490231 A0A1W2PPC1 479 aa19.01■□□□□ 0.63
NUP58-213ENST00000490231 HMMRO75330 724 aa19.01■□□□□ 0.63
NUP58-213ENST00000490231 POLR3DP05423 398 aaPredicted RBP19.01■□□□□ 0.63
NUP58-213ENST00000490231 PRKAR2AP13861 404 aaKnown RBP19.01■□□□□ 0.63
NUP58-213ENST00000490231 PDE6AP16499 860 aa19.01■□□□□ 0.63
NUP58-213ENST00000490231 SHMT1P34896 483 aa19.01■□□□□ 0.63
NUP58-213ENST00000490231 ZYXQ15942 572 aaKnown RBP19.01■□□□□ 0.63
NUP58-213ENST00000490231 MORN1Q5T089 497 aa19.01■□□□□ 0.63
NUP58-213ENST00000490231 CATSPERGQ6ZRH7 1159 aa19.01■□□□□ 0.63
NUP58-213ENST00000490231 PLEKHH3Q7Z736 793 aa19.01■□□□□ 0.63
NUP58-213ENST00000490231 CRNKL1Q9BZJ0 848 aaKnown RBP19.01■□□□□ 0.63
NUP58-213ENST00000490231 NBPF3Q9H094 633 aa19.01■□□□□ 0.63
NUP58-213ENST00000490231 OGDHLQ9ULD0 1010 aa19.01■□□□□ 0.63
NUP58-213ENST00000490231 ZKSCAN1P17029 563 aaPredicted RBP19■□□□□ 0.63
NUP58-213ENST00000490231 VCAM1P19320 739 aa19■□□□□ 0.63
NUP58-213ENST00000490231 RGS2P41220 211 aa19■□□□□ 0.63
NUP58-213ENST00000490231 MNX1P50219 401 aaPredicted RBP19■□□□□ 0.63
NUP58-213ENST00000490231 CCNA1P78396 465 aa19■□□□□ 0.63
NUP58-213ENST00000490231 GABPAQ06546 454 aa19■□□□□ 0.63
NUP58-213ENST00000490231 LBX2Q6XYB7 198 aa19■□□□□ 0.63
NUP58-213ENST00000490231 ZBTB40Q9NUA8 1239 aa19■□□□□ 0.63
NUP58-213ENST00000490231 DDX19BQ9UMR2 479 aa19■□□□□ 0.63
NUP58-213ENST00000490231 DOCK3Q8IZD9 2030 aa19■□□□□ 0.63
NUP58-213ENST00000490231 MYH1P12882 1939 aa19■□□□□ 0.63
NUP58-213ENST00000490231 DDX60LQ5H9U9 1706 aaKnown RBP19■□□□□ 0.63
NUP58-213ENST00000490231 CNMDO75829 334 aa18.99■□□□□ 0.63
NUP58-213ENST00000490231 IFIT2P09913 472 aaKnown RBP18.99■□□□□ 0.63
NUP58-213ENST00000490231 ACER1Q8TDN7 264 aa18.99■□□□□ 0.63
NUP58-213ENST00000490231 APBA2Q99767 749 aa18.99■□□□□ 0.63
NUP58-213ENST00000490231 ZNF532Q9HCE3 1301 aa18.99■□□□□ 0.63
NUP58-213ENST00000490231 CEP290O15078 2479 aa18.98■□□□□ 0.63
NUP58-213ENST00000490231 TCRBV5S4A2TA0A5A2 114 aa18.98■□□□□ 0.63
NUP58-213ENST00000490231 GOLIM4O00461 696 aa18.98■□□□□ 0.63
NUP58-213ENST00000490231 RAB11FIP3O75154 756 aa18.98■□□□□ 0.63
NUP58-213ENST00000490231 GLRX3O76003 335 aaKnown RBP18.98■□□□□ 0.63
NUP58-213ENST00000490231 GUCY1A2P33402 732 aa18.98■□□□□ 0.63
NUP58-213ENST00000490231 CACNB2Q08289 660 aaPredicted RBP18.98■□□□□ 0.63
NUP58-213ENST00000490231 SIRT2Q8IXJ6 389 aa18.98■□□□□ 0.63
NUP58-213ENST00000490231 DNAJC2Q99543 621 aaKnown RBP18.98■□□□□ 0.63
NUP58-213ENST00000490231 C11orf49Q9H6J7 331 aa18.98■□□□□ 0.63
NUP58-213ENST00000490231 CWC22Q9HCG8 908 aaKnown RBP18.98■□□□□ 0.63
NUP58-213ENST00000490231 MCM9Q9NXL9 1143 aa18.98■□□□□ 0.63
NUP58-213ENST00000490231 APBB1O00213 710 aa18.97■□□□□ 0.63
NUP58-213ENST00000490231 MAP2K5Q13163 448 aa18.97■□□□□ 0.63
NUP58-213ENST00000490231 CCL14Q16627 93 aa18.97■□□□□ 0.63
NUP58-213ENST00000490231 CHMP4BQ9H444 224 aaKnown RBP18.97■□□□□ 0.63
NUP58-213ENST00000490231 DCP1AQ9NPI6 582 aaPredicted RBP18.97■□□□□ 0.63
NUP58-213ENST00000490231 COG6Q9Y2V7 657 aa18.97■□□□□ 0.63
NUP58-213ENST00000490231 SEPT2Q15019 361 aa18.96■□□□□ 0.63
NUP58-213ENST00000490231 LCORLQ8N3X6 602 aa18.96■□□□□ 0.63
NUP58-213ENST00000490231 SDR42E1Q8WUS8 393 aa18.96■□□□□ 0.63
NUP58-213ENST00000490231 EDC3Q96F86 508 aaKnown RBP18.96■□□□□ 0.63
NUP58-213ENST00000490231 RPAP3Q9H6T3 665 aaPredicted RBP18.96■□□□□ 0.63
NUP58-213ENST00000490231 STAP2Q9UGK3 403 aa18.96■□□□□ 0.63
NUP58-213ENST00000490231 RANBP2P49792 3224 aaKnown RBP18.95■□□□□ 0.62
NUP58-213ENST00000490231 SLC15A5A6NIM6 579 aa18.95■□□□□ 0.62
NUP58-213ENST00000490231 SPDYE16A6NNV3 312 aaPredicted RBP18.95■□□□□ 0.62
NUP58-213ENST00000490231 LHX8Q68G74 356 aa18.95■□□□□ 0.62
NUP58-213ENST00000490231 C7orf61Q8IZ16 206 aa18.95■□□□□ 0.62
NUP58-213ENST00000490231 PAG1Q9NWQ8 432 aa18.95■□□□□ 0.62
NUP58-213ENST00000490231 BTBD7Q9P203 1132 aa18.95■□□□□ 0.62
NUP58-213ENST00000490231 SWAP70Q9UH65 585 aa18.95■□□□□ 0.62
NUP58-213ENST00000490231 MPHOSPH10O00566 681 aaKnown RBP18.94■□□□□ 0.62
NUP58-213ENST00000490231 HOXC6P09630 235 aa18.94■□□□□ 0.62
NUP58-213ENST00000490231 COL6A1P12109 1028 aa18.94■□□□□ 0.62
NUP58-213ENST00000490231 ATP5JP18859 108 aa18.94■□□□□ 0.62
NUP58-213ENST00000490231 PTPREP23469 700 aa18.94■□□□□ 0.62
NUP58-213ENST00000490231 CCND3P30281 292 aaPredicted RBP18.94■□□□□ 0.62
NUP58-213ENST00000490231 BMP8BP34820 402 aa18.94■□□□□ 0.62
NUP58-213ENST00000490231 EVX2Q03828 476 aa18.94■□□□□ 0.62
NUP58-213ENST00000490231 GDF15Q99988 308 aa18.94■□□□□ 0.62
NUP58-213ENST00000490231 ATP8A2Q9NTI2 1148 aa18.94■□□□□ 0.62
NUP58-213ENST00000490231 TRIOBPQ9H2D6 2365 aa18.94■□□□□ 0.62
NUP58-213ENST00000490231 PFASO15067 1338 aa18.94■□□□□ 0.62
NUP58-213ENST00000490231 NAV1Q8NEY1 1877 aa18.93■□□□□ 0.62
NUP58-213ENST00000490231 A0A1W2PRG0 241 aa18.93■□□□□ 0.62
NUP58-213ENST00000490231 ADD2P35612 726 aa18.93■□□□□ 0.62
NUP58-213ENST00000490231 GRB14Q14449 540 aa18.93■□□□□ 0.62
NUP58-213ENST00000490231 WDR78Q5VTH9 848 aa18.93■□□□□ 0.62
NUP58-213ENST00000490231 MFSD14CQ5VZR4 134 aa18.93■□□□□ 0.62
NUP58-213ENST00000490231 TMEM179Q6ZVK1 233 aa18.93■□□□□ 0.62
NUP58-213ENST00000490231 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.93■□□□□ 0.62
NUP58-213ENST00000490231 ARMT1Q9H993 441 aa18.93■□□□□ 0.62
NUP58-213ENST00000490231 HOXC10Q9NYD6 342 aa18.93■□□□□ 0.62
NUP58-213ENST00000490231 IVNS1ABPQ9Y6Y0 642 aa18.93■□□□□ 0.62
NUP58-213ENST00000490231 COG2Q14746 738 aa18.92■□□□□ 0.62
NUP58-213ENST00000490231 HAUS7Q99871 368 aa18.92■□□□□ 0.62
NUP58-213ENST00000490231 BOLA2Q9H3K6 86 aa18.92■□□□□ 0.62
NUP58-213ENST00000490231 SZT2Q5T011 3432 aa18.91■□□□□ 0.62
NUP58-213ENST00000490231 MBD4O95243 580 aa18.91■□□□□ 0.62
NUP58-213ENST00000490231 CYP2D6P10635 497 aa18.91■□□□□ 0.62
NUP58-213ENST00000490231 SLC44A5Q8NCS7 719 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms