RNA–Protein interactions for RNA: ENST00000489944.1

SEMA6C-208, Transcript of semaphorin 6C, humanhuman

TSL 3

Gene SEMA6C, Length 423 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-208ENST00000489944 CCL5P13501 91 aa14.29□□□□□ -0.12
SEMA6C-208ENST00000489944 GNAT2P19087 354 aa14.29□□□□□ -0.12
SEMA6C-208ENST00000489944 JAG1P78504 1218 aa14.29□□□□□ -0.12
SEMA6C-208ENST00000489944 LCORLQ8N3X6 602 aa14.29□□□□□ -0.12
SEMA6C-208ENST00000489944 KBTBD3Q8NAB2 608 aa14.29□□□□□ -0.12
SEMA6C-208ENST00000489944 HTATIP2Q9BUP3 242 aa14.29□□□□□ -0.12
SEMA6C-208ENST00000489944 RNF208Q9H0X6 261 aa14.29□□□□□ -0.12
SEMA6C-208ENST00000489944 ZNF287Q9HBT7 754 aa14.29□□□□□ -0.12
SEMA6C-208ENST00000489944 HOXC10Q9NYD6 342 aa14.29□□□□□ -0.12
SEMA6C-208ENST00000489944 GABRQQ9UN88 632 aa14.29□□□□□ -0.12
SEMA6C-208ENST00000489944 ZSWIM8A7E2V4 1837 aa14.28□□□□□ -0.12
SEMA6C-208ENST00000489944 MBD4O95243 580 aa14.28□□□□□ -0.12
SEMA6C-208ENST00000489944 ERVK-9P63128 1117 aa14.28□□□□□ -0.12
SEMA6C-208ENST00000489944 ERVK-24P63145 666 aa14.28□□□□□ -0.12
SEMA6C-208ENST00000489944 RAB3GAP1Q15042 981 aa14.28□□□□□ -0.12
SEMA6C-208ENST00000489944 SBK1Q52WX2 424 aa14.28□□□□□ -0.12
SEMA6C-208ENST00000489944 C12orf60Q5U649 245 aa14.28□□□□□ -0.12
SEMA6C-208ENST00000489944 CATSPERGQ6ZRH7 1159 aa14.28□□□□□ -0.12
SEMA6C-208ENST00000489944 CCAR1Q8IX12 1150 aaKnown RBP14.28□□□□□ -0.12
SEMA6C-208ENST00000489944 MB21D1Q8N884 522 aa14.28□□□□□ -0.12
SEMA6C-208ENST00000489944 ANKLE1Q8NAG6 615 aa14.28□□□□□ -0.12
SEMA6C-208ENST00000489944 P2RX7Q99572 595 aaKnown RBP14.28□□□□□ -0.12
SEMA6C-208ENST00000489944 NUDT12Q9BQG2 462 aa14.28□□□□□ -0.12
SEMA6C-208ENST00000489944 ARHGEF10LQ9HCE6 1279 aa14.28□□□□□ -0.12
SEMA6C-208ENST00000489944 ZBTB47Q9UFB7 747 aaPredicted RBP14.28□□□□□ -0.12
SEMA6C-208ENST00000489944 GJD2Q9UKL4 321 aa14.28□□□□□ -0.12
SEMA6C-208ENST00000489944 MYH7P12883 1935 aa14.27□□□□□ -0.12
SEMA6C-208ENST00000489944 SLC34A2O95436 690 aa14.27□□□□□ -0.13
SEMA6C-208ENST00000489944 SGPL1O95470 568 aa14.27□□□□□ -0.13
SEMA6C-208ENST00000489944 INHAP05111 366 aa14.27□□□□□ -0.13
SEMA6C-208ENST00000489944 RRP1P56182 461 aaKnown RBP14.27□□□□□ -0.13
SEMA6C-208ENST00000489944 C16orf86Q6ZW13 317 aa14.27□□□□□ -0.13
SEMA6C-208ENST00000489944 SDR42E1Q8WUS8 393 aa14.27□□□□□ -0.13
SEMA6C-208ENST00000489944 APPBP2Q92624 585 aa14.27□□□□□ -0.13
SEMA6C-208ENST00000489944 ARMT1Q9H993 441 aa14.27□□□□□ -0.13
SEMA6C-208ENST00000489944 PAK6Q9NQU5 681 aaPredicted RBP14.27□□□□□ -0.13
SEMA6C-208ENST00000489944 RBPJLQ9UBG7 517 aa14.27□□□□□ -0.13
SEMA6C-208ENST00000489944 RPTORQ8N122 1335 aa14.26□□□□□ -0.13
SEMA6C-208ENST00000489944 VCAM1P19320 739 aa14.26□□□□□ -0.13
SEMA6C-208ENST00000489944 MTFR1Q15390 333 aa14.26□□□□□ -0.13
SEMA6C-208ENST00000489944 UBE2Q1Q7Z7E8 422 aa14.26□□□□□ -0.13
SEMA6C-208ENST00000489944 U2AF1L4Q8WU68 220 aaKnown RBP14.26□□□□□ -0.13
SEMA6C-208ENST00000489944 KANSL2Q9H9L4 492 aa14.26□□□□□ -0.13
SEMA6C-208ENST00000489944 SYNPO2Q9UMS6 1093 aa14.26□□□□□ -0.13
SEMA6C-208ENST00000489944 TMX2Q9Y320 296 aa14.26□□□□□ -0.13
SEMA6C-208ENST00000489944 SLC4A4Q9Y6R1 1079 aa14.26□□□□□ -0.13
SEMA6C-208ENST00000489944 RNF113AO15541 343 aaKnown RBP14.25□□□□□ -0.13
SEMA6C-208ENST00000489944 STRNO43815 780 aa14.25□□□□□ -0.13
SEMA6C-208ENST00000489944 GUCY1A2P33402 732 aa14.25□□□□□ -0.13
SEMA6C-208ENST00000489944 RGS2P41220 211 aa14.25□□□□□ -0.13
SEMA6C-208ENST00000489944 COG2Q14746 738 aa14.25□□□□□ -0.13
SEMA6C-208ENST00000489944 SEPT2Q15019 361 aa14.25□□□□□ -0.13
SEMA6C-208ENST00000489944 PLEKHH3Q7Z736 793 aa14.25□□□□□ -0.13
SEMA6C-208ENST00000489944 EDC3Q96F86 508 aaKnown RBP14.25□□□□□ -0.13
SEMA6C-208ENST00000489944 STRBPQ96SI9 672 aaKnown RBP14.25□□□□□ -0.13
SEMA6C-208ENST00000489944 CRISPLD2Q9H0B8 497 aa14.25□□□□□ -0.13
SEMA6C-208ENST00000489944 HMX1Q9NP08 348 aaPredicted RBP14.25□□□□□ -0.13
SEMA6C-208ENST00000489944 BRCA2P51587 3418 aa14.24□□□□□ -0.13
SEMA6C-208ENST00000489944 USP17L12C9JPN9 530 aa14.24□□□□□ -0.13
SEMA6C-208ENST00000489944 USP17L21D6R901 530 aa14.24□□□□□ -0.13
SEMA6C-208ENST00000489944 MPHOSPH10O00566 681 aaKnown RBP14.24□□□□□ -0.13
SEMA6C-208ENST00000489944 CDK8P49336 464 aa14.24□□□□□ -0.13
SEMA6C-208ENST00000489944 HDAC1Q13547 482 aaPredicted RBP14.24□□□□□ -0.13
SEMA6C-208ENST00000489944 PPP4R3BQ5MIZ7 849 aa14.24□□□□□ -0.13
SEMA6C-208ENST00000489944 SHCBP1Q8NEM2 672 aa14.24□□□□□ -0.13
SEMA6C-208ENST00000489944 USP6NLQ92738 828 aa14.24□□□□□ -0.13
SEMA6C-208ENST00000489944 NACAP1Q9BZK3 213 aa14.24□□□□□ -0.13
SEMA6C-208ENST00000489944 UNC93B1Q9H1C4 597 aa14.24□□□□□ -0.13
SEMA6C-208ENST00000489944 ROBO3Q96MS0 1386 aa14.23□□□□□ -0.13
SEMA6C-208ENST00000489944 MKI67P46013 3256 aaKnown RBP14.23□□□□□ -0.13
SEMA6C-208ENST00000489944 SLC15A5A6NIM6 579 aa14.23□□□□□ -0.13
SEMA6C-208ENST00000489944 WDR46O15213 610 aaKnown RBP14.23□□□□□ -0.13
SEMA6C-208ENST00000489944 SMARCA5O60264 1052 aaPredicted RBP14.23□□□□□ -0.13
SEMA6C-208ENST00000489944 HOXC6P09630 235 aa14.23□□□□□ -0.13
SEMA6C-208ENST00000489944 ELNP15502 786 aa14.23□□□□□ -0.13
SEMA6C-208ENST00000489944 ICA1Q05084 483 aa14.23□□□□□ -0.13
SEMA6C-208ENST00000489944 MORN1Q5T089 497 aa14.23□□□□□ -0.13
SEMA6C-208ENST00000489944 MAP3K21Q5TCX8 1036 aa14.23□□□□□ -0.13
SEMA6C-208ENST00000489944 CTR9Q6PD62 1173 aa14.23□□□□□ -0.13
SEMA6C-208ENST00000489944 GPR142Q7Z601 462 aa14.23□□□□□ -0.13
SEMA6C-208ENST00000489944 ACER1Q8TDN7 264 aa14.23□□□□□ -0.13
SEMA6C-208ENST00000489944 SHISA4Q96DD7 197 aa14.23□□□□□ -0.13
SEMA6C-208ENST00000489944 APBA2Q99767 749 aa14.23□□□□□ -0.13
SEMA6C-208ENST00000489944 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.23□□□□□ -0.13
SEMA6C-208ENST00000489944 PUS7LQ9H0K6 701 aaKnown RBP14.23□□□□□ -0.13
SEMA6C-208ENST00000489944 RPAP3Q9H6T3 665 aaPredicted RBP14.23□□□□□ -0.13
SEMA6C-208ENST00000489944 CWC22Q9HCG8 908 aaKnown RBP14.23□□□□□ -0.13
SEMA6C-208ENST00000489944 TXNRD2Q9NNW7 524 aa14.23□□□□□ -0.13
SEMA6C-208ENST00000489944 NR2E3Q9Y5X4 410 aa14.23□□□□□ -0.13
SEMA6C-208ENST00000489944 IVNS1ABPQ9Y6Y0 642 aa14.23□□□□□ -0.13
SEMA6C-208ENST00000489944 MYH8P13535 1937 aa14.22□□□□□ -0.13
SEMA6C-208ENST00000489944 FARP2O94887 1054 aaPredicted RBP14.22□□□□□ -0.13
SEMA6C-208ENST00000489944 ZKSCAN1P17029 563 aaPredicted RBP14.22□□□□□ -0.13
SEMA6C-208ENST00000489944 COPB2P35606 906 aa14.22□□□□□ -0.13
SEMA6C-208ENST00000489944 MAP2K5Q13163 448 aa14.22□□□□□ -0.13
SEMA6C-208ENST00000489944 SHROOM1Q2M3G4 852 aaPredicted RBP14.22□□□□□ -0.13
SEMA6C-208ENST00000489944 ABRAQ8N0Z2 381 aa14.22□□□□□ -0.13
SEMA6C-208ENST00000489944 VCPKMTQ9H867 229 aa14.22□□□□□ -0.13
SEMA6C-208ENST00000489944 GOPCQ9HD26 462 aa14.22□□□□□ -0.13
SEMA6C-208ENST00000489944 SLC5A4Q9NY91 659 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms