RNA–Protein interactions for RNA: ENST00000489452.1

LINC00173-204, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 543 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-204ENST00000489452 PRKAR2AP13861 404 aaKnown RBP16.23■□□□□ 0.19
LINC00173-204ENST00000489452 PDE6AP16499 860 aa16.23■□□□□ 0.19
LINC00173-204ENST00000489452 CAPN2P17655 700 aa16.23■□□□□ 0.19
LINC00173-204ENST00000489452 SHMT1P34896 483 aa16.23■□□□□ 0.19
LINC00173-204ENST00000489452 EVX2Q03828 476 aa16.23■□□□□ 0.19
LINC00173-204ENST00000489452 TTF1Q15361 905 aaPredicted RBP16.23■□□□□ 0.19
LINC00173-204ENST00000489452 CCL14Q16627 93 aa16.23■□□□□ 0.19
LINC00173-204ENST00000489452 PLEKHH3Q7Z736 793 aa16.23■□□□□ 0.19
LINC00173-204ENST00000489452 EDC3Q96F86 508 aaKnown RBP16.23■□□□□ 0.19
LINC00173-204ENST00000489452 RIOK1Q9BRS2 568 aaKnown RBP16.23■□□□□ 0.19
LINC00173-204ENST00000489452 EHD4Q9H223 541 aa16.23■□□□□ 0.19
LINC00173-204ENST00000489452 MAST2Q6P0Q8 1798 aa16.23■□□□□ 0.19
LINC00173-204ENST00000489452 ZNF532Q9HCE3 1301 aa16.22■□□□□ 0.19
LINC00173-204ENST00000489452 MPHOSPH10O00566 681 aaKnown RBP16.22■□□□□ 0.19
LINC00173-204ENST00000489452 MS4A1P11836 297 aa16.22■□□□□ 0.19
LINC00173-204ENST00000489452 ZKSCAN1P17029 563 aaPredicted RBP16.22■□□□□ 0.19
LINC00173-204ENST00000489452 CACNB2Q08289 660 aaPredicted RBP16.22■□□□□ 0.19
LINC00173-204ENST00000489452 SEPT2Q15019 361 aa16.22■□□□□ 0.19
LINC00173-204ENST00000489452 GPR142Q7Z601 462 aa16.22■□□□□ 0.19
LINC00173-204ENST00000489452 SIRT2Q8IXJ6 389 aa16.22■□□□□ 0.19
LINC00173-204ENST00000489452 C7orf61Q8IZ16 206 aa16.22■□□□□ 0.19
LINC00173-204ENST00000489452 SOCS4Q8WXH5 440 aa16.22■□□□□ 0.19
LINC00173-204ENST00000489452 KIF1BPQ96EK5 621 aa16.22■□□□□ 0.19
LINC00173-204ENST00000489452 CRNKL1Q9BZJ0 848 aaKnown RBP16.22■□□□□ 0.19
LINC00173-204ENST00000489452 NBPF3Q9H094 633 aa16.22■□□□□ 0.19
LINC00173-204ENST00000489452 MCM9Q9NXL9 1143 aa16.22■□□□□ 0.19
LINC00173-204ENST00000489452 MYH1P12882 1939 aa16.21■□□□□ 0.19
LINC00173-204ENST00000489452 CYP2D6P10635 497 aa16.21■□□□□ 0.19
LINC00173-204ENST00000489452 XRCC5P13010 732 aaKnown RBP16.21■□□□□ 0.19
LINC00173-204ENST00000489452 RGS2P41220 211 aa16.21■□□□□ 0.19
LINC00173-204ENST00000489452 USP14P54578 494 aa16.21■□□□□ 0.19
LINC00173-204ENST00000489452 SLFNL1Q499Z3 407 aa16.21■□□□□ 0.19
LINC00173-204ENST00000489452 MORN1Q5T089 497 aa16.21■□□□□ 0.19
LINC00173-204ENST00000489452 CATSPERGQ6ZRH7 1159 aa16.21■□□□□ 0.19
LINC00173-204ENST00000489452 RPAP2Q8IXW5 612 aaPredicted RBP16.21■□□□□ 0.19
LINC00173-204ENST00000489452 ANKLE1Q8NAG6 615 aa16.21■□□□□ 0.19
LINC00173-204ENST00000489452 GTF3C2Q8WUA4 911 aaPredicted RBP16.21■□□□□ 0.19
LINC00173-204ENST00000489452 SDR42E1Q8WUS8 393 aa16.21■□□□□ 0.19
LINC00173-204ENST00000489452 USP6NLQ92738 828 aa16.21■□□□□ 0.19
LINC00173-204ENST00000489452 KIAA1683Q9H0B3 1180 aa16.21■□□□□ 0.19
LINC00173-204ENST00000489452 PRO3102Q9H379 93 aa16.21■□□□□ 0.19
LINC00173-204ENST00000489452 ZMYND8Q9ULU4 1186 aaPredicted RBP16.21■□□□□ 0.19
LINC00173-204ENST00000489452 RABGAP1Q9Y3P9 1069 aa16.21■□□□□ 0.19
LINC00173-204ENST00000489452 DNAH12Q6ZR08 3092 aa16.21■□□□□ 0.19
LINC00173-204ENST00000489452 HMMRO75330 724 aa16.2■□□□□ 0.18
LINC00173-204ENST00000489452 CNMDO75829 334 aa16.2■□□□□ 0.18
LINC00173-204ENST00000489452 VCAM1P19320 739 aa16.2■□□□□ 0.18
LINC00173-204ENST00000489452 CCND3P30281 292 aaPredicted RBP16.2■□□□□ 0.18
LINC00173-204ENST00000489452 GUCY1A2P33402 732 aa16.2■□□□□ 0.18
LINC00173-204ENST00000489452 MNX1P50219 401 aaPredicted RBP16.2■□□□□ 0.18
LINC00173-204ENST00000489452 MAP3K21Q5TCX8 1036 aa16.2■□□□□ 0.18
LINC00173-204ENST00000489452 TMED8Q6PL24 325 aaPredicted RBP16.2■□□□□ 0.18
LINC00173-204ENST00000489452 LCORLQ8N3X6 602 aa16.2■□□□□ 0.18
LINC00173-204ENST00000489452 C12orf42Q96LP6 360 aa16.2■□□□□ 0.18
LINC00173-204ENST00000489452 BOLA2Q9H3K6 86 aa16.2■□□□□ 0.18
LINC00173-204ENST00000489452 C11orf49Q9H6J7 331 aa16.2■□□□□ 0.18
LINC00173-204ENST00000489452 RPAP3Q9H6T3 665 aaPredicted RBP16.2■□□□□ 0.18
LINC00173-204ENST00000489452 ARMT1Q9H993 441 aa16.2■□□□□ 0.18
LINC00173-204ENST00000489452 ZBTB40Q9NUA8 1239 aa16.2■□□□□ 0.18
LINC00173-204ENST00000489452 OGDHLQ9ULD0 1010 aa16.2■□□□□ 0.18
LINC00173-204ENST00000489452 FOCADQ5VW36 1801 aa16.19■□□□□ 0.18
LINC00173-204ENST00000489452 PRKAB2O43741 272 aa16.19■□□□□ 0.18
LINC00173-204ENST00000489452 GLRX3O76003 335 aaKnown RBP16.19■□□□□ 0.18
LINC00173-204ENST00000489452 CCNA1P78396 465 aa16.19■□□□□ 0.18
LINC00173-204ENST00000489452 TRMT44Q8IYL2 757 aaKnown RBP16.19■□□□□ 0.18
LINC00173-204ENST00000489452 SLC44A5Q8NCS7 719 aa16.19■□□□□ 0.18
LINC00173-204ENST00000489452 DYNLL2Q96FJ2 89 aa16.19■□□□□ 0.18
LINC00173-204ENST00000489452 BTBD7Q9P203 1132 aa16.19■□□□□ 0.18
LINC00173-204ENST00000489452 DDX19BQ9UMR2 479 aa16.19■□□□□ 0.18
LINC00173-204ENST00000489452 LAMA3Q16787 3333 aa16.18■□□□□ 0.18
LINC00173-204ENST00000489452 PLXNB2O15031 1838 aa16.18■□□□□ 0.18
LINC00173-204ENST00000489452 A0A1W2PRG0 241 aa16.18■□□□□ 0.18
LINC00173-204ENST00000489452 TCRBV5S4A2TA0A5A2 114 aa16.18■□□□□ 0.18
LINC00173-204ENST00000489452 SYN1P17600 705 aa16.18■□□□□ 0.18
LINC00173-204ENST00000489452 GABPAQ06546 454 aa16.18■□□□□ 0.18
LINC00173-204ENST00000489452 MAP2K5Q13163 448 aa16.18■□□□□ 0.18
LINC00173-204ENST00000489452 DCP1AQ9NPI6 582 aaPredicted RBP16.18■□□□□ 0.18
LINC00173-204ENST00000489452 PAG1Q9NWQ8 432 aa16.18■□□□□ 0.18
LINC00173-204ENST00000489452 RAB11FIP3O75154 756 aa16.17■□□□□ 0.18
LINC00173-204ENST00000489452 SAMD1Q6SPF0 538 aaPredicted RBP16.17■□□□□ 0.18
LINC00173-204ENST00000489452 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.17■□□□□ 0.18
LINC00173-204ENST00000489452 APBA2Q99767 749 aa16.17■□□□□ 0.18
LINC00173-204ENST00000489452 A0A0C4DFX4 3053 aa16.16■□□□□ 0.18
LINC00173-204ENST00000489452 CYP2D7A0A087X1C5 515 aa16.16■□□□□ 0.18
LINC00173-204ENST00000489452 SLC15A5A6NIM6 579 aa16.16■□□□□ 0.18
LINC00173-204ENST00000489452 SPDYE16A6NNV3 312 aaPredicted RBP16.16■□□□□ 0.18
LINC00173-204ENST00000489452 MBD4O95243 580 aa16.16■□□□□ 0.18
LINC00173-204ENST00000489452 CHGBP05060 677 aa16.16■□□□□ 0.18
LINC00173-204ENST00000489452 PTPREP23469 700 aa16.16■□□□□ 0.18
LINC00173-204ENST00000489452 CNGA1P29973 690 aa16.16■□□□□ 0.18
LINC00173-204ENST00000489452 ATP2B2Q01814 1243 aa16.16■□□□□ 0.18
LINC00173-204ENST00000489452 MFSD14CQ5VZR4 134 aa16.16■□□□□ 0.18
LINC00173-204ENST00000489452 LHX8Q68G74 356 aa16.16■□□□□ 0.18
LINC00173-204ENST00000489452 TANGO6Q9C0B7 1094 aa16.16■□□□□ 0.18
LINC00173-204ENST00000489452 FLRT1Q9NZU1 646 aa16.16■□□□□ 0.18
LINC00173-204ENST00000489452 IVNS1ABPQ9Y6Y0 642 aa16.16■□□□□ 0.18
LINC00173-204ENST00000489452 SMIM22K7EJ46 135 aa16.15■□□□□ 0.18
LINC00173-204ENST00000489452 SOX1O00570 391 aaPredicted RBP16.15■□□□□ 0.18
LINC00173-204ENST00000489452 SMARCA5O60264 1052 aaPredicted RBP16.15■□□□□ 0.18
LINC00173-204ENST00000489452 COG2Q14746 738 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms