RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 CENPQQ7L2Z9 268 aaPredicted RBP18.79■□□□□ 0.6
LMX1A-204ENST00000489443 FOXP2O15409 715 aa18.78■□□□□ 0.6
LMX1A-204ENST00000489443 ECM2O94769 699 aaPredicted RBP18.78■□□□□ 0.6
LMX1A-204ENST00000489443 GSPT1P15170 499 aaKnown RBP18.78■□□□□ 0.6
LMX1A-204ENST00000489443 USP17L2Q6R6M4 530 aa18.78■□□□□ 0.6
LMX1A-204ENST00000489443 CWC27Q6UX04 472 aaKnown RBP18.78■□□□□ 0.6
LMX1A-204ENST00000489443 ZNF589Q86UQ0 364 aaPredicted RBP18.78■□□□□ 0.6
LMX1A-204ENST00000489443 SMCR8Q8TEV9 937 aaPredicted RBP18.78■□□□□ 0.6
LMX1A-204ENST00000489443 CCDC136Q96JN2 1154 aa18.78■□□□□ 0.6
LMX1A-204ENST00000489443 EMILIN3Q9NT22 766 aa18.78■□□□□ 0.6
LMX1A-204ENST00000489443 PNMA3Q9UL41 463 aa18.78■□□□□ 0.6
LMX1A-204ENST00000489443 ADGRA2Q96PE1 1338 aa18.77■□□□□ 0.6
LMX1A-204ENST00000489443 HIP1O00291 1037 aa18.77■□□□□ 0.6
LMX1A-204ENST00000489443 OSBPP22059 807 aa18.77■□□□□ 0.6
LMX1A-204ENST00000489443 MFAP1P55081 439 aaKnown RBP18.77■□□□□ 0.6
LMX1A-204ENST00000489443 CLEC10AQ8IUN9 316 aa18.77■□□□□ 0.6
LMX1A-204ENST00000489443 KIAA1683Q9H0B3 1180 aa18.77■□□□□ 0.6
LMX1A-204ENST00000489443 ASCC2Q9H1I8 757 aaPredicted RBP18.77■□□□□ 0.6
LMX1A-204ENST00000489443 TRIM17Q9Y577 477 aa18.77■□□□□ 0.6
LMX1A-204ENST00000489443 ROBO3Q96MS0 1386 aa18.77■□□□□ 0.6
LMX1A-204ENST00000489443 CCDC171Q6TFL3 1326 aa18.76■□□□□ 0.59
LMX1A-204ENST00000489443 PRDM1O75626 825 aa18.76■□□□□ 0.59
LMX1A-204ENST00000489443 CAPN15O75808 1086 aa18.76■□□□□ 0.59
LMX1A-204ENST00000489443 SLC3A2P08195 630 aaKnown RBP18.76■□□□□ 0.59
LMX1A-204ENST00000489443 RASA1P20936 1047 aa18.76■□□□□ 0.59
LMX1A-204ENST00000489443 USP14P54578 494 aa18.76■□□□□ 0.59
LMX1A-204ENST00000489443 IRX3P78415 501 aaPredicted RBP18.76■□□□□ 0.59
LMX1A-204ENST00000489443 PPARAQ07869 468 aa18.76■□□□□ 0.59
LMX1A-204ENST00000489443 KIF22Q14807 665 aa18.76■□□□□ 0.59
LMX1A-204ENST00000489443 ABHD8Q96I13 439 aa18.76■□□□□ 0.59
LMX1A-204ENST00000489443 EFCC1Q9HA90 598 aa18.76■□□□□ 0.59
LMX1A-204ENST00000489443 ZNF287Q9HBT7 754 aa18.76■□□□□ 0.59
LMX1A-204ENST00000489443 A0A1W2PRG0 241 aa18.75■□□□□ 0.59
LMX1A-204ENST00000489443 HSPD1P10809 573 aaKnown RBP18.75■□□□□ 0.59
LMX1A-204ENST00000489443 LACTBP83111 547 aaPredicted RBP18.75■□□□□ 0.59
LMX1A-204ENST00000489443 CAP1Q01518 475 aa18.75■□□□□ 0.59
LMX1A-204ENST00000489443 ATP2B2Q01814 1243 aa18.75■□□□□ 0.59
LMX1A-204ENST00000489443 ICA1Q05084 483 aa18.75■□□□□ 0.59
LMX1A-204ENST00000489443 CTDSPL2Q05D32 466 aa18.75■□□□□ 0.59
LMX1A-204ENST00000489443 PDE4BQ07343 736 aa18.75■□□□□ 0.59
LMX1A-204ENST00000489443 ARHGEF6Q15052 776 aa18.75■□□□□ 0.59
LMX1A-204ENST00000489443 ALX1Q15699 326 aa18.75■□□□□ 0.59
LMX1A-204ENST00000489443 PKN2Q16513 984 aaKnown RBP18.75■□□□□ 0.59
LMX1A-204ENST00000489443 OTOP1Q7RTM1 612 aa18.75■□□□□ 0.59
LMX1A-204ENST00000489443 ZNF444Q8N0Y2 327 aaPredicted RBP18.75■□□□□ 0.59
LMX1A-204ENST00000489443 FGAP02671 866 aa18.74■□□□□ 0.59
LMX1A-204ENST00000489443 BCRP11274 1271 aa18.74■□□□□ 0.59
LMX1A-204ENST00000489443 HOXA7P31268 230 aaPredicted RBP18.74■□□□□ 0.59
LMX1A-204ENST00000489443 IFFO2Q5TF58 517 aa18.74■□□□□ 0.59
LMX1A-204ENST00000489443 SKAP1Q86WV1 359 aa18.74■□□□□ 0.59
LMX1A-204ENST00000489443 SIAH1Q8IUQ4 282 aa18.74■□□□□ 0.59
LMX1A-204ENST00000489443 P2RX7Q99572 595 aaKnown RBP18.74■□□□□ 0.59
LMX1A-204ENST00000489443 ARHGAP39Q9C0H5 1083 aa18.74■□□□□ 0.59
LMX1A-204ENST00000489443 KANSL2Q9H9L4 492 aa18.74■□□□□ 0.59
LMX1A-204ENST00000489443 ARHGEF10LQ9HCE6 1279 aa18.74■□□□□ 0.59
LMX1A-204ENST00000489443 ZSWIM8A7E2V4 1837 aa18.73■□□□□ 0.59
LMX1A-204ENST00000489443 EEF2P13639 858 aaKnown RBP18.73■□□□□ 0.59
LMX1A-204ENST00000489443 ANKRD13CQ8N6S4 541 aa18.73■□□□□ 0.59
LMX1A-204ENST00000489443 C12orf42Q96LP6 360 aa18.73■□□□□ 0.59
LMX1A-204ENST00000489443 USP17L15C9J2P7 530 aa18.72■□□□□ 0.59
LMX1A-204ENST00000489443 USP17L13C9JLJ4 530 aa18.72■□□□□ 0.59
LMX1A-204ENST00000489443 USP17L11C9JVI0 530 aa18.72■□□□□ 0.59
LMX1A-204ENST00000489443 USP17L18D6R9N7 530 aa18.72■□□□□ 0.59
LMX1A-204ENST00000489443 USP17L22D6RA61 530 aa18.72■□□□□ 0.59
LMX1A-204ENST00000489443 USP17L17D6RBQ6 530 aa18.72■□□□□ 0.59
LMX1A-204ENST00000489443 USP17L19D6RCP7 530 aa18.72■□□□□ 0.59
LMX1A-204ENST00000489443 USP17L20D6RJB6 530 aa18.72■□□□□ 0.59
LMX1A-204ENST00000489443 FMNL1O95466 1100 aaPredicted RBP18.72■□□□□ 0.59
LMX1A-204ENST00000489443 VCAM1P19320 739 aa18.72■□□□□ 0.59
LMX1A-204ENST00000489443 PSMC4P43686 418 aa18.72■□□□□ 0.59
LMX1A-204ENST00000489443 GCLCP48506 637 aaPredicted RBP18.72■□□□□ 0.59
LMX1A-204ENST00000489443 USP17L24Q0WX57 530 aa18.72■□□□□ 0.59
LMX1A-204ENST00000489443 FBXO46Q6PJ61 603 aaPredicted RBP18.72■□□□□ 0.59
LMX1A-204ENST00000489443 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.72■□□□□ 0.59
LMX1A-204ENST00000489443 SH2D4AQ9H788 454 aa18.72■□□□□ 0.59
LMX1A-204ENST00000489443 INCENPQ9NQS7 918 aa18.72■□□□□ 0.59
LMX1A-204ENST00000489443 HTTP42858 3142 aa18.72■□□□□ 0.59
LMX1A-204ENST00000489443 FAM47AQ5JRC9 791 aa18.71■□□□□ 0.59
LMX1A-204ENST00000489443 TRIM47Q96LD4 638 aa18.71■□□□□ 0.59
LMX1A-204ENST00000489443 RPAP3Q9H6T3 665 aaPredicted RBP18.71■□□□□ 0.59
LMX1A-204ENST00000489443 ANAPC4Q9UJX5 808 aa18.71■□□□□ 0.59
LMX1A-204ENST00000489443 TMX2Q9Y320 296 aa18.71■□□□□ 0.59
LMX1A-204ENST00000489443 CCDC85CA6NKD9 419 aa18.7■□□□□ 0.58
LMX1A-204ENST00000489443 RAD21O60216 631 aa18.7■□□□□ 0.58
LMX1A-204ENST00000489443 TSPY3P0CV98 308 aa18.7■□□□□ 0.58
LMX1A-204ENST00000489443 TSPY8P0CW00 308 aa18.7■□□□□ 0.58
LMX1A-204ENST00000489443 CTGFP29279 349 aa18.7■□□□□ 0.58
LMX1A-204ENST00000489443 HAND2P61296 217 aa18.7■□□□□ 0.58
LMX1A-204ENST00000489443 HERVK_113P62684 666 aa18.7■□□□□ 0.58
LMX1A-204ENST00000489443 TFAP4Q01664 338 aa18.7■□□□□ 0.58
LMX1A-204ENST00000489443 KIAA1755Q5JYT7 1200 aa18.7■□□□□ 0.58
LMX1A-204ENST00000489443 CATSPERGQ6ZRH7 1159 aa18.7■□□□□ 0.58
LMX1A-204ENST00000489443 SPICE1Q8N0Z3 855 aa18.7■□□□□ 0.58
LMX1A-204ENST00000489443 HPS5Q9UPZ3 1129 aa18.7■□□□□ 0.58
LMX1A-204ENST00000489443 PTPN22Q9Y2R2 807 aa18.7■□□□□ 0.58
LMX1A-204ENST00000489443 GREB1LQ9C091 1923 aaPredicted RBP18.69■□□□□ 0.58
LMX1A-204ENST00000489443 CHMLP26374 656 aa18.69■□□□□ 0.58
LMX1A-204ENST00000489443 RUFY2Q8WXA3 655 aa18.69■□□□□ 0.58
LMX1A-204ENST00000489443 TANGO6Q9C0B7 1094 aa18.69■□□□□ 0.58
LMX1A-204ENST00000489443 VCPKMTQ9H867 229 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms