RNA–Protein interactions for RNA: ENST00000489261.1

ITSN1-231, Transcript of intersectin 1, human

TSL 1 (best)

Gene ITSN1, Length 1,108 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-231	ENST00000489261	CEBPZ	Q03701	1054 aa	Known RBP	12.52	□□□□□ -0.41
ITSN1-231	ENST00000489261	RILPL1	Q5EBL4	403 aa		12.52	□□□□□ -0.41
ITSN1-231	ENST00000489261	SASS6	Q6UVJ0	657 aa		12.52	□□□□□ -0.41
ITSN1-231	ENST00000489261	HHIPL2	Q6UWX4	724 aa		12.52	□□□□□ -0.41
ITSN1-231	ENST00000489261	TEX11	Q8IYF3	940 aa		12.52	□□□□□ -0.41
ITSN1-231	ENST00000489261	STK11IP	Q8N1F8	1099 aa		12.52	□□□□□ -0.41
ITSN1-231	ENST00000489261	SUPT20H	Q8NEM7	779 aa		12.52	□□□□□ -0.41
ITSN1-231	ENST00000489261	PDLIM2	Q96JY6	352 aa		12.52	□□□□□ -0.41
ITSN1-231	ENST00000489261	CEP131	Q9UPN4	1083 aa		12.52	□□□□□ -0.41
ITSN1-231	ENST00000489261	JAG2	Q9Y219	1238 aa		12.52	□□□□□ -0.41
ITSN1-231	ENST00000489261	KIN	O60870	393 aa	Known RBP	12.51	□□□□□ -0.41
ITSN1-231	ENST00000489261	NR1I2	O75469	434 aa		12.51	□□□□□ -0.41
ITSN1-231	ENST00000489261	PRDM1	O75626	825 aa		12.51	□□□□□ -0.41
ITSN1-231	ENST00000489261	GTF2I	P78347	998 aa		12.51	□□□□□ -0.41
ITSN1-231	ENST00000489261	HDLBP	Q00341	1268 aa	Known RBP	12.51	□□□□□ -0.41
ITSN1-231	ENST00000489261	FUT2	Q10981	343 aa		12.51	□□□□□ -0.41
ITSN1-231	ENST00000489261	DIXDC1	Q155Q3	683 aa		12.51	□□□□□ -0.41
ITSN1-231	ENST00000489261	C16orf86	Q6ZW13	317 aa		12.51	□□□□□ -0.41
ITSN1-231	ENST00000489261	TMTC3	Q6ZXV5	915 aa		12.51	□□□□□ -0.41
ITSN1-231	ENST00000489261	NOSTRIN	Q8IVI9	506 aa		12.51	□□□□□ -0.41
ITSN1-231	ENST00000489261	FSIP1	Q8NA03	581 aa		12.51	□□□□□ -0.41
ITSN1-231	ENST00000489261	ENGASE	Q8NFI3	743 aa		12.51	□□□□□ -0.41
ITSN1-231	ENST00000489261	TIGD1	Q96MW7	591 aa		12.51	□□□□□ -0.41
ITSN1-231	ENST00000489261	GPR101	Q96P66	508 aa	Predicted RBP	12.51	□□□□□ -0.41
ITSN1-231	ENST00000489261	TAOK3	Q9H2K8	898 aa		12.51	□□□□□ -0.41
ITSN1-231	ENST00000489261	KAT14	Q9H8E8	782 aa		12.51	□□□□□ -0.41
ITSN1-231	ENST00000489261	BRMS1	Q9HCU9	246 aa		12.51	□□□□□ -0.41
ITSN1-231	ENST00000489261	CLIC4	Q9Y696	253 aa		12.51	□□□□□ -0.41
ITSN1-231	ENST00000489261	KIF28P	B7ZC32	967 aa		12.5	□□□□□ -0.41
ITSN1-231	ENST00000489261	RIMBP2	O15034	1052 aa		12.5	□□□□□ -0.41
ITSN1-231	ENST00000489261	CUTA	O60888	179 aa		12.5	□□□□□ -0.41
ITSN1-231	ENST00000489261	PPFIA3	O75145	1194 aa		12.5	□□□□□ -0.41
ITSN1-231	ENST00000489261	BMP15	O95972	392 aa		12.5	□□□□□ -0.41
ITSN1-231	ENST00000489261	CYP2D6	P10635	497 aa		12.5	□□□□□ -0.41
ITSN1-231	ENST00000489261	SMARCA1	P28370	1054 aa		12.5	□□□□□ -0.41
ITSN1-231	ENST00000489261	RHBDL3	P58872	404 aa		12.5	□□□□□ -0.41
ITSN1-231	ENST00000489261	GRIK5	Q16478	980 aa		12.5	□□□□□ -0.41
ITSN1-231	ENST00000489261	CCDC93	Q567U6	631 aa		12.5	□□□□□ -0.41
ITSN1-231	ENST00000489261	PPP4R3B	Q5MIZ7	849 aa		12.5	□□□□□ -0.41
ITSN1-231	ENST00000489261	ELOA2	Q8IYF1	753 aa	Predicted RBP	12.5	□□□□□ -0.41
ITSN1-231	ENST00000489261	SH3GLB2	Q9NR46	395 aa		12.5	□□□□□ -0.41
ITSN1-231	ENST00000489261	ZNF219	Q9P2Y4	722 aa	Predicted RBP	12.5	□□□□□ -0.41
ITSN1-231	ENST00000489261	LTBP1	Q14766	1721 aa		12.5	□□□□□ -0.41
ITSN1-231	ENST00000489261	MYH15	Q9Y2K3	1946 aa		12.5	□□□□□ -0.41
ITSN1-231	ENST00000489261	FAM237A	A0A1B0GTK4	181 aa		12.49	□□□□□ -0.41
ITSN1-231	ENST00000489261	TSPY3	P0CV98	308 aa		12.49	□□□□□ -0.41
ITSN1-231	ENST00000489261	TSPY8	P0CW00	308 aa		12.49	□□□□□ -0.41
ITSN1-231	ENST00000489261	TYRO3	Q06418	890 aa		12.49	□□□□□ -0.41
ITSN1-231	ENST00000489261	SNW1	Q13573	536 aa	Known RBP	12.49	□□□□□ -0.41
ITSN1-231	ENST00000489261	FAM47A	Q5JRC9	791 aa		12.49	□□□□□ -0.41
ITSN1-231	ENST00000489261	MAPKAPK5	Q8IW41	473 aa		12.49	□□□□□ -0.41
ITSN1-231	ENST00000489261	DIS3L2	Q8IYB7	885 aa	Known RBP	12.49	□□□□□ -0.41
ITSN1-231	ENST00000489261	FMR1NB	Q8N0W7	255 aa	Predicted RBP	12.49	□□□□□ -0.41
ITSN1-231	ENST00000489261	NEDD1	Q8NHV4	660 aa		12.49	□□□□□ -0.41
ITSN1-231	ENST00000489261	FAM200A	Q8TCP9	573 aa		12.49	□□□□□ -0.41
ITSN1-231	ENST00000489261	AIFM3	Q96NN9	605 aa		12.49	□□□□□ -0.41
ITSN1-231	ENST00000489261	NMRK2	Q9NPI5	230 aa		12.49	□□□□□ -0.41
ITSN1-231	ENST00000489261	SWAP70	Q9UH65	585 aa		12.49	□□□□□ -0.41
ITSN1-231	ENST00000489261	DAGLA	Q9Y4D2	1042 aa		12.49	□□□□□ -0.41
ITSN1-231	ENST00000489261		V9GY48	417 aa	Predicted RBP	12.49	□□□□□ -0.41
ITSN1-231	ENST00000489261	SCN4A	P35499	1836 aa		12.48	□□□□□ -0.41
ITSN1-231	ENST00000489261	LAMB1	P07942	1786 aa		12.48	□□□□□ -0.41
ITSN1-231	ENST00000489261	FLT1	P17948	1338 aa		12.48	□□□□□ -0.41
ITSN1-231	ENST00000489261	MYO3B	Q8WXR4	1341 aa		12.48	□□□□□ -0.41
ITSN1-231	ENST00000489261	GLTPD2	A6NH11	291 aa		12.48	□□□□□ -0.41
ITSN1-231	ENST00000489261	CALML3	P27482	149 aa		12.48	□□□□□ -0.41
ITSN1-231	ENST00000489261	KRT2	P35908	639 aa		12.48	□□□□□ -0.41
ITSN1-231	ENST00000489261	CDK8	P49336	464 aa		12.48	□□□□□ -0.41
ITSN1-231	ENST00000489261	GRM4	Q14833	912 aa		12.48	□□□□□ -0.41
ITSN1-231	ENST00000489261	PTPA	Q15257	358 aa		12.48	□□□□□ -0.41
ITSN1-231	ENST00000489261	PKN1	Q16512	942 aa		12.48	□□□□□ -0.41
ITSN1-231	ENST00000489261	TPRN	Q4KMQ1	711 aa		12.48	□□□□□ -0.41
ITSN1-231	ENST00000489261	AXDND1	Q5T1B0	1012 aa	Predicted RBP	12.48	□□□□□ -0.41
ITSN1-231	ENST00000489261	STRIP1	Q5VSL9	837 aa		12.48	□□□□□ -0.41
ITSN1-231	ENST00000489261	GALNT17	Q6IS24	598 aa		12.48	□□□□□ -0.41
ITSN1-231	ENST00000489261	RCSD1	Q6JBY9	416 aa		12.48	□□□□□ -0.41
ITSN1-231	ENST00000489261	ZNF579	Q8NAF0	562 aa	Known RBP	12.48	□□□□□ -0.41
ITSN1-231	ENST00000489261	RNF214	Q8ND24	703 aa		12.48	□□□□□ -0.41
ITSN1-231	ENST00000489261	PHF20	Q9BVI0	1012 aa		12.48	□□□□□ -0.41
ITSN1-231	ENST00000489261	GJB4	Q9NTQ9	266 aa		12.48	□□□□□ -0.41
ITSN1-231	ENST00000489261	NOL7	Q9UMY1	257 aa	Known RBP	12.48	□□□□□ -0.41
ITSN1-231	ENST00000489261	BAZ2A	Q9UIF9	1905 aa	Known RBP	12.47	□□□□□ -0.41
ITSN1-231	ENST00000489261	BTBD18	B2RXH4	712 aa		12.47	□□□□□ -0.41
ITSN1-231	ENST00000489261	SMIM22	K7EJ46	135 aa		12.47	□□□□□ -0.41
ITSN1-231	ENST00000489261	NPM3	O75607	178 aa	Known RBP	12.47	□□□□□ -0.41
ITSN1-231	ENST00000489261	RASA1	P20936	1047 aa		12.47	□□□□□ -0.41
ITSN1-231	ENST00000489261	GUCY1A2	P33402	732 aa		12.47	□□□□□ -0.41
ITSN1-231	ENST00000489261	NOV	P48745	357 aa		12.47	□□□□□ -0.41
ITSN1-231	ENST00000489261	PLCD1	P51178	756 aa		12.47	□□□□□ -0.41
ITSN1-231	ENST00000489261	CAMK4	Q16566	473 aa		12.47	□□□□□ -0.41
ITSN1-231	ENST00000489261	PFKFB3	Q16875	520 aa	Predicted RBP	12.47	□□□□□ -0.41
ITSN1-231	ENST00000489261	OLFM4	Q6UX06	510 aa		12.47	□□□□□ -0.41
ITSN1-231	ENST00000489261	RTKN2	Q8IZC4	609 aa		12.47	□□□□□ -0.41
ITSN1-231	ENST00000489261	PNMA1	Q8ND90	353 aa		12.47	□□□□□ -0.41
ITSN1-231	ENST00000489261	TEKT1	Q969V4	418 aa		12.47	□□□□□ -0.41
ITSN1-231	ENST00000489261	DYNLL2	Q96FJ2	89 aa		12.47	□□□□□ -0.41
ITSN1-231	ENST00000489261	SDF4	Q9BRK5	362 aa		12.47	□□□□□ -0.41
ITSN1-231	ENST00000489261	FTO	Q9C0B1	505 aa	Known RBP eCLIP	12.47	□□□□□ -0.41
ITSN1-231	ENST00000489261	VPS33B	Q9H267	617 aa		12.47	□□□□□ -0.41
ITSN1-231	ENST00000489261	IL17RB	Q9NRM6	502 aa		12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms