RNA–Protein interactions for RNA: ENST00000489158.1

EXOSC1-211, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 2,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-211ENST00000489158 BECN2A8MW95 431 aa10.37□□□□□ -0.75
EXOSC1-211ENST00000489158 NFKBIEO00221 500 aa10.37□□□□□ -0.75
EXOSC1-211ENST00000489158 SLC3A2P08195 630 aaKnown RBP10.37□□□□□ -0.75
EXOSC1-211ENST00000489158 EXOSC10Q01780 885 aaKnown RBP10.37□□□□□ -0.75
EXOSC1-211ENST00000489158 SLC4A8Q2Y0W8 1093 aa10.37□□□□□ -0.75
EXOSC1-211ENST00000489158 RRP12Q5JTH9 1297 aaKnown RBP10.37□□□□□ -0.75
EXOSC1-211ENST00000489158 AKNAD1Q5T1N1 836 aa10.37□□□□□ -0.75
EXOSC1-211ENST00000489158 DHX40Q8IX18 779 aaKnown RBP10.37□□□□□ -0.75
EXOSC1-211ENST00000489158 MB21D2Q8IYB1 491 aaPredicted RBP10.37□□□□□ -0.75
EXOSC1-211ENST00000489158 CCAR2Q8N163 923 aaKnown RBP10.37□□□□□ -0.75
EXOSC1-211ENST00000489158 TGFBRAP1Q8WUH2 860 aa10.37□□□□□ -0.75
EXOSC1-211ENST00000489158 JDP2Q8WYK2 163 aa10.37□□□□□ -0.75
EXOSC1-211ENST00000489158 GTF3C6Q969F1 213 aa10.37□□□□□ -0.75
EXOSC1-211ENST00000489158 AGXT2Q9BYV1 514 aa10.37□□□□□ -0.75
EXOSC1-211ENST00000489158 NBPF3Q9H094 633 aa10.37□□□□□ -0.75
EXOSC1-211ENST00000489158 MCM9Q9NXL9 1143 aa10.37□□□□□ -0.75
EXOSC1-211ENST00000489158 FAM53CQ9NYF3 392 aa10.37□□□□□ -0.75
EXOSC1-211ENST00000489158 CFAP45Q9UL16 551 aa10.37□□□□□ -0.75
EXOSC1-211ENST00000489158 NAP1L2Q9ULW6 460 aaPredicted RBP10.37□□□□□ -0.75
EXOSC1-211ENST00000489158 DICER1Q9UPY3 1922 aaKnown RBP10.37□□□□□ -0.75
EXOSC1-211ENST00000489158 MYH1P12882 1939 aa10.37□□□□□ -0.75
EXOSC1-211ENST00000489158 B4E1Z4 1266 aa10.37□□□□□ -0.75
EXOSC1-211ENST00000489158 USP17L12C9JPN9 530 aa10.37□□□□□ -0.75
EXOSC1-211ENST00000489158 USP17L21D6R901 530 aa10.37□□□□□ -0.75
EXOSC1-211ENST00000489158 SLU7O95391 586 aaKnown RBP10.37□□□□□ -0.75
EXOSC1-211ENST00000489158 VIL1P09327 827 aaKnown RBP10.37□□□□□ -0.75
EXOSC1-211ENST00000489158 RBM5P52756 815 aaKnown RBP eCLIP10.37□□□□□ -0.75
EXOSC1-211ENST00000489158 FOSBP53539 338 aa10.37□□□□□ -0.75
EXOSC1-211ENST00000489158 RSBN1LQ6PCB5 846 aaPredicted RBP10.37□□□□□ -0.75
EXOSC1-211ENST00000489158 AGBL3Q8NEM8 1001 aa10.37□□□□□ -0.75
EXOSC1-211ENST00000489158 NLGN2Q8NFZ4 835 aa10.37□□□□□ -0.75
EXOSC1-211ENST00000489158 CHMP4CQ96CF2 233 aa10.37□□□□□ -0.75
EXOSC1-211ENST00000489158 ZDHHC15Q96MV8 337 aa10.37□□□□□ -0.75
EXOSC1-211ENST00000489158 GOLPH3LQ9H4A5 285 aa10.37□□□□□ -0.75
EXOSC1-211ENST00000489158 MKRN1Q9UHC7 482 aaKnown RBP10.37□□□□□ -0.75
EXOSC1-211ENST00000489158 ROBO3Q96MS0 1386 aa10.37□□□□□ -0.75
EXOSC1-211ENST00000489158 NEDD4P46934 1319 aa10.36□□□□□ -0.75
EXOSC1-211ENST00000489158 CYP2D7A0A087X1C5 515 aa10.36□□□□□ -0.75
EXOSC1-211ENST00000489158 CTAGE5O15320 804 aa10.36□□□□□ -0.75
EXOSC1-211ENST00000489158 PRC1O43663 620 aa10.36□□□□□ -0.75
EXOSC1-211ENST00000489158 CRKP46108 304 aa10.36□□□□□ -0.75
EXOSC1-211ENST00000489158 RHBDL3P58872 404 aa10.36□□□□□ -0.75
EXOSC1-211ENST00000489158 CTR9Q6PD62 1173 aa10.36□□□□□ -0.75
EXOSC1-211ENST00000489158 TEX11Q8IYF3 940 aa10.36□□□□□ -0.75
EXOSC1-211ENST00000489158 FTOQ9C0B1 505 aaKnown RBP eCLIP10.36□□□□□ -0.75
EXOSC1-211ENST00000489158 FHDC1Q9C0D6 1143 aaPredicted RBP10.36□□□□□ -0.75
EXOSC1-211ENST00000489158 ZSCAN16Q9H4T2 348 aaPredicted RBP10.36□□□□□ -0.75
EXOSC1-211ENST00000489158 INCENPQ9NQS7 918 aa10.36□□□□□ -0.75
EXOSC1-211ENST00000489158 ST7Q9NRC1 585 aa10.36□□□□□ -0.75
EXOSC1-211ENST00000489158 HDAC9Q9UKV0 1011 aa10.36□□□□□ -0.75
EXOSC1-211ENST00000489158 TAOK2Q9UL54 1235 aa10.36□□□□□ -0.75
EXOSC1-211ENST00000489158 ADAMTSL1Q8N6G6 1762 aa10.36□□□□□ -0.75
EXOSC1-211ENST00000489158 FGRP09769 529 aa10.36□□□□□ -0.75
EXOSC1-211ENST00000489158 ADD1P35611 737 aaKnown RBP10.36□□□□□ -0.75
EXOSC1-211ENST00000489158 MAPKAPK5Q8IW41 473 aa10.36□□□□□ -0.75
EXOSC1-211ENST00000489158 TMEM87BQ96K49 555 aa10.36□□□□□ -0.75
EXOSC1-211ENST00000489158 NPM3O75607 178 aaKnown RBP10.35□□□□□ -0.75
EXOSC1-211ENST00000489158 RAD17O75943 681 aa10.35□□□□□ -0.75
EXOSC1-211ENST00000489158 SNW1Q13573 536 aaKnown RBP10.35□□□□□ -0.75
EXOSC1-211ENST00000489158 TNIP1Q15025 636 aa10.35□□□□□ -0.75
EXOSC1-211ENST00000489158 CIAPIN1Q6FI81 312 aa10.35□□□□□ -0.75
EXOSC1-211ENST00000489158 AOPEPQ8N6M6 819 aa10.35□□□□□ -0.75
EXOSC1-211ENST00000489158 BBXQ8WY36 941 aaPredicted RBP10.35□□□□□ -0.75
EXOSC1-211ENST00000489158 ERCC4Q92889 916 aaPredicted RBP10.35□□□□□ -0.75
EXOSC1-211ENST00000489158 ZNF446Q9NWS9 450 aa10.35□□□□□ -0.75
EXOSC1-211ENST00000489158 RCOR1Q9UKL0 485 aa10.35□□□□□ -0.75
EXOSC1-211ENST00000489158 CCDC66A2RUB6 948 aa10.34□□□□□ -0.75
EXOSC1-211ENST00000489158 SMIM22K7EJ46 135 aa10.34□□□□□ -0.75
EXOSC1-211ENST00000489158 PSMD14O00487 310 aa10.34□□□□□ -0.75
EXOSC1-211ENST00000489158 ORC4O43929 436 aa10.34□□□□□ -0.75
EXOSC1-211ENST00000489158 POLR3DP05423 398 aaPredicted RBP10.34□□□□□ -0.75
EXOSC1-211ENST00000489158 USP17L8P0C7I0 530 aa10.34□□□□□ -0.75
EXOSC1-211ENST00000489158 RPS12P25398 132 aaKnown RBP10.34□□□□□ -0.75
EXOSC1-211ENST00000489158 EVCP57679 992 aa10.34□□□□□ -0.75
EXOSC1-211ENST00000489158 PDE4BQ07343 736 aa10.34□□□□□ -0.75
EXOSC1-211ENST00000489158 APOBRQ0VD83 1088 aa10.34□□□□□ -0.75
EXOSC1-211ENST00000489158 PICALMQ13492 652 aa10.34□□□□□ -0.75
EXOSC1-211ENST00000489158 C12orf60Q5U649 245 aa10.34□□□□□ -0.75
EXOSC1-211ENST00000489158 CCDC73Q6ZRK6 1079 aa10.34□□□□□ -0.75
EXOSC1-211ENST00000489158 ESR2Q92731 530 aa10.34□□□□□ -0.75
EXOSC1-211ENST00000489158 GMLQ99445 158 aa10.34□□□□□ -0.75
EXOSC1-211ENST00000489158 ZNF287Q9HBT7 754 aa10.34□□□□□ -0.75
EXOSC1-211ENST00000489158 ANO10Q9NW15 660 aa10.34□□□□□ -0.75
EXOSC1-211ENST00000489158 FLT1P17948 1338 aa10.34□□□□□ -0.75
EXOSC1-211ENST00000489158 ERICH4A6NGS2 130 aa10.34□□□□□ -0.75
EXOSC1-211ENST00000489158 KINO60870 393 aaKnown RBP10.34□□□□□ -0.75
EXOSC1-211ENST00000489158 ANTXR2P58335 489 aa10.34□□□□□ -0.75
EXOSC1-211ENST00000489158 SCRN1Q12765 414 aa10.34□□□□□ -0.75
EXOSC1-211ENST00000489158 SART3Q15020 963 aaKnown RBP10.34□□□□□ -0.75
EXOSC1-211ENST00000489158 APOBEC3HQ6NTF7 200 aaKnown RBP10.34□□□□□ -0.75
EXOSC1-211ENST00000489158 CYB5R4Q7L1T6 521 aa10.34□□□□□ -0.75
EXOSC1-211ENST00000489158 OGFOD1Q8N543 542 aa10.34□□□□□ -0.75
EXOSC1-211ENST00000489158 SYT17Q9BSW7 474 aa10.34□□□□□ -0.75
EXOSC1-211ENST00000489158 KCND1Q9NSA2 647 aa10.34□□□□□ -0.75
EXOSC1-211ENST00000489158 TMEM51Q9NW97 253 aa10.34□□□□□ -0.75
EXOSC1-211ENST00000489158 ZSWIM5Q9P217 1185 aa10.34□□□□□ -0.75
EXOSC1-211ENST00000489158 SAP30BPQ9UHR5 308 aaKnown RBP10.34□□□□□ -0.75
EXOSC1-211ENST00000489158 COL2A1P02458 1487 aaPredicted RBP10.34□□□□□ -0.75
EXOSC1-211ENST00000489158 UTRNP46939 3433 aa10.33□□□□□ -0.76
EXOSC1-211ENST00000489158 ERICH2A1L162 156 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 635.6 ms