RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 IL13P35225 146 aa10.61□□□□□ -0.71
TRAPPC12-221ENST00000489032 KIAA0319Q5VV43 1072 aa10.61□□□□□ -0.71
TRAPPC12-221ENST00000489032 CEP135Q66GS9 1140 aa10.61□□□□□ -0.71
TRAPPC12-221ENST00000489032 PSAPL1Q6NUJ1 521 aa10.61□□□□□ -0.71
TRAPPC12-221ENST00000489032 PLD4Q96BZ4 506 aa10.61□□□□□ -0.71
TRAPPC12-221ENST00000489032 SMG9Q9H0W8 520 aaKnown RBP10.61□□□□□ -0.71
TRAPPC12-221ENST00000489032 PRKRIP1Q9H875 184 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC12-221ENST00000489032 LIN7BQ9HAP6 207 aa10.61□□□□□ -0.71
TRAPPC12-221ENST00000489032 LATS2Q9NRM7 1088 aa10.61□□□□□ -0.71
TRAPPC12-221ENST00000489032 A0A1W2PP55 124 aa10.6□□□□□ -0.71
TRAPPC12-221ENST00000489032 SORBS3O60504 671 aa10.6□□□□□ -0.71
TRAPPC12-221ENST00000489032 EIF4BP23588 611 aaKnown RBP10.6□□□□□ -0.71
TRAPPC12-221ENST00000489032 KANK3Q6NY19 840 aa10.6□□□□□ -0.71
TRAPPC12-221ENST00000489032 PI16Q6UXB8 463 aa10.6□□□□□ -0.71
TRAPPC12-221ENST00000489032 NPM2Q86SE8 214 aaKnown RBP10.6□□□□□ -0.71
TRAPPC12-221ENST00000489032 ZCRB1Q8TBF4 217 aaKnown RBP10.6□□□□□ -0.71
TRAPPC12-221ENST00000489032 ZKSCAN3Q9BRR0 538 aa10.6□□□□□ -0.71
TRAPPC12-221ENST00000489032 PBX4Q9BYU1 374 aa10.6□□□□□ -0.71
TRAPPC12-221ENST00000489032 RASSF4Q9H2L5 321 aa10.6□□□□□ -0.71
TRAPPC12-221ENST00000489032 SUV39H2Q9H5I1 410 aa10.6□□□□□ -0.71
TRAPPC12-221ENST00000489032 FRRS1LQ9P0K9 344 aa10.6□□□□□ -0.71
TRAPPC12-221ENST00000489032 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.6□□□□□ -0.71
TRAPPC12-221ENST00000489032 RGPD2P0DJD1 1756 aa10.6□□□□□ -0.71
TRAPPC12-221ENST00000489032 DOT1LQ8TEK3 1739 aa10.59□□□□□ -0.71
TRAPPC12-221ENST00000489032 CELA2BP08218 269 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC12-221ENST00000489032 DAB2P98082 770 aa10.59□□□□□ -0.71
TRAPPC12-221ENST00000489032 PERM1Q5SV97 790 aa10.59□□□□□ -0.71
TRAPPC12-221ENST00000489032 SULT6B1Q6IMI4 303 aa10.59□□□□□ -0.71
TRAPPC12-221ENST00000489032 TMC4Q7Z404 712 aa10.59□□□□□ -0.71
TRAPPC12-221ENST00000489032 SVOPQ8N4V2 548 aa10.59□□□□□ -0.71
TRAPPC12-221ENST00000489032 NEDD1Q8NHV4 660 aa10.59□□□□□ -0.71
TRAPPC12-221ENST00000489032 NUDT8Q8WV74 236 aa10.59□□□□□ -0.71
TRAPPC12-221ENST00000489032 MRRFQ96E11 262 aaKnown RBP10.59□□□□□ -0.71
TRAPPC12-221ENST00000489032 BCO2Q9BYV7 579 aa10.59□□□□□ -0.71
TRAPPC12-221ENST00000489032 SRCIN1Q9C0H9 1055 aa10.59□□□□□ -0.71
TRAPPC12-221ENST00000489032 JPH1Q9HDC5 661 aaPredicted RBP10.59□□□□□ -0.71
TRAPPC12-221ENST00000489032 DZANK1Q9NVP4 752 aa10.59□□□□□ -0.71
TRAPPC12-221ENST00000489032 VTI1BQ9UEU0 232 aa10.59□□□□□ -0.71
TRAPPC12-221ENST00000489032 C5P01031 1676 aa10.58□□□□□ -0.72
TRAPPC12-221ENST00000489032 E9PSI1 815 aa10.58□□□□□ -0.72
TRAPPC12-221ENST00000489032 PDE2AO00408 941 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC12-221ENST00000489032 ATP11AP98196 1134 aa10.58□□□□□ -0.72
TRAPPC12-221ENST00000489032 PLEKHO1Q53GL0 409 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC12-221ENST00000489032 PEAR1Q5VY43 1037 aaPredicted RBP10.58□□□□□ -0.72
TRAPPC12-221ENST00000489032 LYPD4Q6UWN0 246 aa10.58□□□□□ -0.72
TRAPPC12-221ENST00000489032 ARHGAP27Q6ZUM4 889 aa10.58□□□□□ -0.72
TRAPPC12-221ENST00000489032 SMC1BQ8NDV3 1235 aa10.58□□□□□ -0.72
TRAPPC12-221ENST00000489032 ASAP3Q8TDY4 903 aa10.58□□□□□ -0.72
TRAPPC12-221ENST00000489032 ZNF428Q96B54 188 aa10.58□□□□□ -0.72
TRAPPC12-221ENST00000489032 AK5Q9Y6K8 562 aa10.58□□□□□ -0.72
TRAPPC12-221ENST00000489032 NCAPD2Q15021 1401 aa10.58□□□□□ -0.72
TRAPPC12-221ENST00000489032 KDM2BQ8NHM5 1336 aa10.58□□□□□ -0.72
TRAPPC12-221ENST00000489032 PLEKHG2Q9H7P9 1386 aa10.57□□□□□ -0.72
TRAPPC12-221ENST00000489032 TRPA1O75762 1119 aa10.57□□□□□ -0.72
TRAPPC12-221ENST00000489032 NEFMP07197 916 aa10.57□□□□□ -0.72
TRAPPC12-221ENST00000489032 U2AF1L5P0DN76 240 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC12-221ENST00000489032 ACPPP15309 386 aa10.57□□□□□ -0.72
TRAPPC12-221ENST00000489032 U2AF1Q01081 240 aaKnown RBP eCLIP10.57□□□□□ -0.72
TRAPPC12-221ENST00000489032 AMOTQ4VCS5 1084 aa10.57□□□□□ -0.72
TRAPPC12-221ENST00000489032 NXPE4Q6UWF7 544 aa10.57□□□□□ -0.72
TRAPPC12-221ENST00000489032 CHSY3Q70JA7 882 aa10.57□□□□□ -0.72
TRAPPC12-221ENST00000489032 FAM161BQ96MY7 647 aa10.57□□□□□ -0.72
TRAPPC12-221ENST00000489032 C12orf49Q9H741 205 aa10.57□□□□□ -0.72
TRAPPC12-221ENST00000489032 MEGF6O75095 1541 aa10.57□□□□□ -0.72
TRAPPC12-221ENST00000489032 PCDH11XQ9BZA7 1347 aa10.57□□□□□ -0.72
TRAPPC12-221ENST00000489032 PCDH11YQ9BZA8 1340 aa10.57□□□□□ -0.72
TRAPPC12-221ENST00000489032 LILRB5O75023 590 aa10.56□□□□□ -0.72
TRAPPC12-221ENST00000489032 HMOX1P09601 288 aa10.56□□□□□ -0.72
TRAPPC12-221ENST00000489032 GRM2Q14416 872 aa10.56□□□□□ -0.72
TRAPPC12-221ENST00000489032 LCE2CQ5TA81 110 aa10.56□□□□□ -0.72
TRAPPC12-221ENST00000489032 TMEM102Q8N9M5 508 aaPredicted RBP10.56□□□□□ -0.72
TRAPPC12-221ENST00000489032 BTBD6Q96KE9 485 aa10.56□□□□□ -0.72
TRAPPC12-221ENST00000489032 MDFIQ99750 246 aa10.56□□□□□ -0.72
TRAPPC12-221ENST00000489032 LPIN3Q9BQK8 851 aa10.56□□□□□ -0.72
TRAPPC12-221ENST00000489032 PNNQ9H307 717 aaKnown RBP10.56□□□□□ -0.72
TRAPPC12-221ENST00000489032 RRAGCQ9HB90 399 aa10.56□□□□□ -0.72
TRAPPC12-221ENST00000489032 FAM8A1Q9UBU6 413 aa10.56□□□□□ -0.72
TRAPPC12-221ENST00000489032 NAGPAQ9UK23 515 aa10.56□□□□□ -0.72
TRAPPC12-221ENST00000489032 C10orf71Q711Q0 1435 aa10.56□□□□□ -0.72
TRAPPC12-221ENST00000489032 COL3A1P02461 1466 aaPredicted RBP10.55□□□□□ -0.72
TRAPPC12-221ENST00000489032 KDRP35968 1356 aa10.55□□□□□ -0.72
TRAPPC12-221ENST00000489032 PTPRAP18433 802 aa10.55□□□□□ -0.72
TRAPPC12-221ENST00000489032 WDR43Q15061 677 aaKnown RBP eCLIP10.55□□□□□ -0.72
TRAPPC12-221ENST00000489032 GDF6Q6KF10 455 aaPredicted RBP10.55□□□□□ -0.72
TRAPPC12-221ENST00000489032 C1orf229Q6ZS94 237 aaPredicted RBP10.55□□□□□ -0.72
TRAPPC12-221ENST00000489032 CACTIN-AS1Q8N1I8 211 aa10.55□□□□□ -0.72
TRAPPC12-221ENST00000489032 ZFYVE1Q9HBF4 777 aa10.55□□□□□ -0.72
TRAPPC12-221ENST00000489032 TAF1LQ8IZX4 1826 aa10.55□□□□□ -0.72
TRAPPC12-221ENST00000489032 TNRC6CQ9HCJ0 1690 aaKnown RBP10.54□□□□□ -0.72
TRAPPC12-221ENST00000489032 M0R082 166 aa10.54□□□□□ -0.72
TRAPPC12-221ENST00000489032 HSP90AB1P08238 724 aaKnown RBP10.54□□□□□ -0.72
TRAPPC12-221ENST00000489032 C1orf141Q5JVX7 400 aa10.54□□□□□ -0.72
TRAPPC12-221ENST00000489032 C9orf131Q5VYM1 1079 aa10.54□□□□□ -0.72
TRAPPC12-221ENST00000489032 DTHD1Q6ZMT9 781 aa10.54□□□□□ -0.72
TRAPPC12-221ENST00000489032 IFNL2Q8IZJ0 200 aa10.54□□□□□ -0.72
TRAPPC12-221ENST00000489032 ZNF417Q8TAU3 575 aa10.54□□□□□ -0.72
TRAPPC12-221ENST00000489032 TTC9Q92623 222 aa10.54□□□□□ -0.72
TRAPPC12-221ENST00000489032 NXPE3Q969Y0 559 aa10.54□□□□□ -0.72
TRAPPC12-221ENST00000489032 ZNF587Q96SQ5 575 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC12-221ENST00000489032 RNF19AQ9NV58 838 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms