RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 WDR78Q5VTH9 848 aa19.31■□□□□ 0.68
ERGIC3-217ENST00000488935 GPR142Q7Z601 462 aa19.31■□□□□ 0.68
ERGIC3-217ENST00000488935 CCAR1Q8IX12 1150 aaKnown RBP19.31■□□□□ 0.68
ERGIC3-217ENST00000488935 C7orf61Q8IZ16 206 aa19.31■□□□□ 0.68
ERGIC3-217ENST00000488935 LCORLQ8N3X6 602 aa19.31■□□□□ 0.68
ERGIC3-217ENST00000488935 SLC44A5Q8NCS7 719 aa19.31■□□□□ 0.68
ERGIC3-217ENST00000488935 NUDT12Q9BQG2 462 aa19.31■□□□□ 0.68
ERGIC3-217ENST00000488935 ZMYND8Q9ULU4 1186 aaPredicted RBP19.31■□□□□ 0.68
ERGIC3-217ENST00000488935 MPHOSPH10O00566 681 aaKnown RBP19.3■□□□□ 0.68
ERGIC3-217ENST00000488935 PRKAB2O43741 272 aa19.3■□□□□ 0.68
ERGIC3-217ENST00000488935 CCND3P30281 292 aaPredicted RBP19.3■□□□□ 0.68
ERGIC3-217ENST00000488935 TTC6Q86TZ1 520 aa19.3■□□□□ 0.68
ERGIC3-217ENST00000488935 CLEC10AQ8IUN9 316 aa19.3■□□□□ 0.68
ERGIC3-217ENST00000488935 DYNLL2Q96FJ2 89 aa19.3■□□□□ 0.68
ERGIC3-217ENST00000488935 BOLA2Q9H3K6 86 aa19.3■□□□□ 0.68
ERGIC3-217ENST00000488935 ARMT1Q9H993 441 aa19.3■□□□□ 0.68
ERGIC3-217ENST00000488935 MCM9Q9NXL9 1143 aa19.3■□□□□ 0.68
ERGIC3-217ENST00000488935 DDX60LQ5H9U9 1706 aaKnown RBP19.3■□□□□ 0.68
ERGIC3-217ENST00000488935 BAZ2AQ9UIF9 1905 aaKnown RBP19.29■□□□□ 0.68
ERGIC3-217ENST00000488935 IFIT2P09913 472 aaKnown RBP19.29■□□□□ 0.68
ERGIC3-217ENST00000488935 SYN1P17600 705 aa19.29■□□□□ 0.68
ERGIC3-217ENST00000488935 CACNB2Q08289 660 aaPredicted RBP19.29■□□□□ 0.68
ERGIC3-217ENST00000488935 C20orf194Q5TEA3 1177 aa19.29■□□□□ 0.68
ERGIC3-217ENST00000488935 NECAB2Q7Z6G3 386 aa19.29■□□□□ 0.68
ERGIC3-217ENST00000488935 PLEKHH3Q7Z736 793 aa19.29■□□□□ 0.68
ERGIC3-217ENST00000488935 CLASRPQ8N2M8 674 aaKnown RBP19.29■□□□□ 0.68
ERGIC3-217ENST00000488935 PRO3102Q9H379 93 aa19.29■□□□□ 0.68
ERGIC3-217ENST00000488935 CWC22Q9HCG8 908 aaKnown RBP19.29■□□□□ 0.68
ERGIC3-217ENST00000488935 GINM1Q9NU53 330 aa19.29■□□□□ 0.68
ERGIC3-217ENST00000488935 BTBD7Q9P203 1132 aa19.29■□□□□ 0.68
ERGIC3-217ENST00000488935 CYP2D7A0A087X1C5 515 aa19.28■□□□□ 0.68
ERGIC3-217ENST00000488935 A0A1W2PRG0 241 aa19.28■□□□□ 0.68
ERGIC3-217ENST00000488935 TCRBV5S4A2TA0A5A2 114 aa19.28■□□□□ 0.68
ERGIC3-217ENST00000488935 USP17L15C9J2P7 530 aa19.28■□□□□ 0.68
ERGIC3-217ENST00000488935 USP17L13C9JLJ4 530 aa19.28■□□□□ 0.68
ERGIC3-217ENST00000488935 USP17L11C9JVI0 530 aa19.28■□□□□ 0.68
ERGIC3-217ENST00000488935 USP17L18D6R9N7 530 aa19.28■□□□□ 0.68
ERGIC3-217ENST00000488935 USP17L22D6RA61 530 aa19.28■□□□□ 0.68
ERGIC3-217ENST00000488935 USP17L17D6RBQ6 530 aa19.28■□□□□ 0.68
ERGIC3-217ENST00000488935 USP17L19D6RCP7 530 aa19.28■□□□□ 0.68
ERGIC3-217ENST00000488935 USP17L20D6RJB6 530 aa19.28■□□□□ 0.68
ERGIC3-217ENST00000488935 SMARCA5O60264 1052 aaPredicted RBP19.28■□□□□ 0.68
ERGIC3-217ENST00000488935 VCAM1P19320 739 aa19.28■□□□□ 0.68
ERGIC3-217ENST00000488935 USP17L24Q0WX57 530 aa19.28■□□□□ 0.68
ERGIC3-217ENST00000488935 PDE3AQ14432 1141 aa19.28■□□□□ 0.68
ERGIC3-217ENST00000488935 MORN1Q5T089 497 aa19.28■□□□□ 0.68
ERGIC3-217ENST00000488935 CATSPERGQ6ZRH7 1159 aa19.28■□□□□ 0.68
ERGIC3-217ENST00000488935 USP6NLQ92738 828 aa19.28■□□□□ 0.68
ERGIC3-217ENST00000488935 KIF1BPQ96EK5 621 aa19.28■□□□□ 0.68
ERGIC3-217ENST00000488935 EHD4Q9H223 541 aa19.28■□□□□ 0.68
ERGIC3-217ENST00000488935 RPAP3Q9H6T3 665 aaPredicted RBP19.28■□□□□ 0.68
ERGIC3-217ENST00000488935 CABP5Q9NP86 173 aa19.28■□□□□ 0.68
ERGIC3-217ENST00000488935 ZBTB40Q9NUA8 1239 aa19.28■□□□□ 0.68
ERGIC3-217ENST00000488935 FLRT1Q9NZU1 646 aa19.28■□□□□ 0.68
ERGIC3-217ENST00000488935 SOX1O00570 391 aaPredicted RBP19.27■□□□□ 0.68
ERGIC3-217ENST00000488935 ZKSCAN1P17029 563 aaPredicted RBP19.27■□□□□ 0.68
ERGIC3-217ENST00000488935 MAPK4P31152 587 aa19.27■□□□□ 0.68
ERGIC3-217ENST00000488935 HSP90AB4PQ58FF6 505 aa19.27■□□□□ 0.68
ERGIC3-217ENST00000488935 KIAA1755Q5JYT7 1200 aa19.27■□□□□ 0.68
ERGIC3-217ENST00000488935 SAMD1Q6SPF0 538 aaPredicted RBP19.27■□□□□ 0.68
ERGIC3-217ENST00000488935 CRNKL1Q9BZJ0 848 aaKnown RBP19.27■□□□□ 0.68
ERGIC3-217ENST00000488935 GABPAQ06546 454 aa19.26■□□□□ 0.67
ERGIC3-217ENST00000488935 TTF1Q15361 905 aaPredicted RBP19.26■□□□□ 0.67
ERGIC3-217ENST00000488935 MAP3K21Q5TCX8 1036 aa19.26■□□□□ 0.67
ERGIC3-217ENST00000488935 C12orf42Q96LP6 360 aa19.26■□□□□ 0.67
ERGIC3-217ENST00000488935 DCP1AQ9NPI6 582 aaPredicted RBP19.26■□□□□ 0.67
ERGIC3-217ENST00000488935 SPDYE16A6NNV3 312 aaPredicted RBP19.25■□□□□ 0.67
ERGIC3-217ENST00000488935 MBD4O95243 580 aa19.25■□□□□ 0.67
ERGIC3-217ENST00000488935 RGS2P41220 211 aa19.25■□□□□ 0.67
ERGIC3-217ENST00000488935 RPAP2Q8IXW5 612 aaPredicted RBP19.25■□□□□ 0.67
ERGIC3-217ENST00000488935 LRCH3Q96II8 777 aa19.25■□□□□ 0.67
ERGIC3-217ENST00000488935 NBPF3Q9H094 633 aa19.25■□□□□ 0.67
ERGIC3-217ENST00000488935 KIAA1683Q9H0B3 1180 aa19.25■□□□□ 0.67
ERGIC3-217ENST00000488935 C11orf49Q9H6J7 331 aa19.25■□□□□ 0.67
ERGIC3-217ENST00000488935 OGDHLQ9ULD0 1010 aa19.25■□□□□ 0.67
ERGIC3-217ENST00000488935 RABGAP1Q9Y3P9 1069 aa19.25■□□□□ 0.67
ERGIC3-217ENST00000488935 MYH8P13535 1937 aa19.24■□□□□ 0.67
ERGIC3-217ENST00000488935 IGSF3O75054 1194 aa19.24■□□□□ 0.67
ERGIC3-217ENST00000488935 XRCC5P13010 732 aaKnown RBP19.24■□□□□ 0.67
ERGIC3-217ENST00000488935 AKR1B1P15121 316 aa19.24■□□□□ 0.67
ERGIC3-217ENST00000488935 USP14P54578 494 aa19.24■□□□□ 0.67
ERGIC3-217ENST00000488935 NPLOC4Q8TAT6 608 aa19.24■□□□□ 0.67
ERGIC3-217ENST00000488935 SOCS4Q8WXH5 440 aa19.24■□□□□ 0.67
ERGIC3-217ENST00000488935 PAG1Q9NWQ8 432 aa19.24■□□□□ 0.67
ERGIC3-217ENST00000488935 DDX19BQ9UMR2 479 aa19.24■□□□□ 0.67
ERGIC3-217ENST00000488935 LAMA3Q16787 3333 aa19.24■□□□□ 0.67
ERGIC3-217ENST00000488935 PFASO15067 1338 aa19.24■□□□□ 0.67
ERGIC3-217ENST00000488935 HMMRO75330 724 aa19.23■□□□□ 0.67
ERGIC3-217ENST00000488935 MAP2K5Q13163 448 aa19.23■□□□□ 0.67
ERGIC3-217ENST00000488935 LHX8Q68G74 356 aa19.23■□□□□ 0.67
ERGIC3-217ENST00000488935 CERS3Q8IU89 383 aa19.23■□□□□ 0.67
ERGIC3-217ENST00000488935 SPICE1Q8N0Z3 855 aa19.23■□□□□ 0.67
ERGIC3-217ENST00000488935 PTPREP23469 700 aa19.22■□□□□ 0.67
ERGIC3-217ENST00000488935 ADD2P35612 726 aa19.22■□□□□ 0.67
ERGIC3-217ENST00000488935 SIAH1Q8IUQ4 282 aa19.22■□□□□ 0.67
ERGIC3-217ENST00000488935 STK11IPQ8N1F8 1099 aa19.22■□□□□ 0.67
ERGIC3-217ENST00000488935 ANKLE1Q8NAG6 615 aa19.22■□□□□ 0.67
ERGIC3-217ENST00000488935 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.22■□□□□ 0.67
ERGIC3-217ENST00000488935 APBA2Q99767 749 aa19.22■□□□□ 0.67
ERGIC3-217ENST00000488935 TANGO6Q9C0B7 1094 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms