RNA–Protein interactions for RNA: ENST00000488918.2

ARHGEF39-204, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 347 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-204ENST00000488918 USP17L22D6RA61 530 aa13.36□□□□□ -0.27
ARHGEF39-204ENST00000488918 USP17L17D6RBQ6 530 aa13.36□□□□□ -0.27
ARHGEF39-204ENST00000488918 USP17L19D6RCP7 530 aa13.36□□□□□ -0.27
ARHGEF39-204ENST00000488918 USP17L20D6RJB6 530 aa13.36□□□□□ -0.27
ARHGEF39-204ENST00000488918 M0R2C6 588 aa13.36□□□□□ -0.27
ARHGEF39-204ENST00000488918 HIP1O00291 1037 aa13.36□□□□□ -0.27
ARHGEF39-204ENST00000488918 TNPO2O14787 897 aaKnown RBP13.36□□□□□ -0.27
ARHGEF39-204ENST00000488918 CHGBP05060 677 aa13.36□□□□□ -0.27
ARHGEF39-204ENST00000488918 ICA1Q05084 483 aa13.36□□□□□ -0.27
ARHGEF39-204ENST00000488918 USP17L24Q0WX57 530 aa13.36□□□□□ -0.27
ARHGEF39-204ENST00000488918 SEPT2Q15019 361 aa13.36□□□□□ -0.27
ARHGEF39-204ENST00000488918 ZMYM1Q5SVZ6 1142 aa13.36□□□□□ -0.27
ARHGEF39-204ENST00000488918 TICAM2Q86XR7 235 aa13.36□□□□□ -0.27
ARHGEF39-204ENST00000488918 ASCC2Q9H1I8 757 aaPredicted RBP13.36□□□□□ -0.27
ARHGEF39-204ENST00000488918 HELLSQ9NRZ9 838 aa13.36□□□□□ -0.27
ARHGEF39-204ENST00000488918 MYO5AQ9Y4I1 1855 aaKnown RBP13.36□□□□□ -0.27
ARHGEF39-204ENST00000488918 CYP2D7A0A087X1C5 515 aa13.35□□□□□ -0.27
ARHGEF39-204ENST00000488918 GSG1L2A8MUP6 293 aa13.35□□□□□ -0.27
ARHGEF39-204ENST00000488918 GABPAQ06546 454 aa13.35□□□□□ -0.27
ARHGEF39-204ENST00000488918 MOGSQ13724 837 aa13.35□□□□□ -0.27
ARHGEF39-204ENST00000488918 SBK1Q52WX2 424 aa13.35□□□□□ -0.27
ARHGEF39-204ENST00000488918 C16orf86Q6ZW13 317 aa13.35□□□□□ -0.27
ARHGEF39-204ENST00000488918 IFNL3Q8IZI9 196 aa13.35□□□□□ -0.27
ARHGEF39-204ENST00000488918 TANGO6Q9C0B7 1094 aa13.35□□□□□ -0.27
ARHGEF39-204ENST00000488918 KIAA1683Q9H0B3 1180 aa13.35□□□□□ -0.27
ARHGEF39-204ENST00000488918 KANSL2Q9H9L4 492 aa13.35□□□□□ -0.27
ARHGEF39-204ENST00000488918 GOPCQ9HD26 462 aa13.35□□□□□ -0.27
ARHGEF39-204ENST00000488918 TOMM22Q9NS69 142 aa13.35□□□□□ -0.27
ARHGEF39-204ENST00000488918 HOXA7P31268 230 aaPredicted RBP13.34□□□□□ -0.27
ARHGEF39-204ENST00000488918 CCNA1P78396 465 aa13.34□□□□□ -0.27
ARHGEF39-204ENST00000488918 FAM110CQ1W6H9 321 aa13.34□□□□□ -0.27
ARHGEF39-204ENST00000488918 MCMDC2Q4G0Z9 681 aa13.34□□□□□ -0.27
ARHGEF39-204ENST00000488918 PPP4R3BQ5MIZ7 849 aa13.34□□□□□ -0.27
ARHGEF39-204ENST00000488918 SAMD1Q6SPF0 538 aaPredicted RBP13.34□□□□□ -0.27
ARHGEF39-204ENST00000488918 SLC44A5Q8NCS7 719 aa13.34□□□□□ -0.27
ARHGEF39-204ENST00000488918 GPRC5AQ8NFJ5 357 aa13.34□□□□□ -0.27
ARHGEF39-204ENST00000488918 TRIM47Q96LD4 638 aa13.34□□□□□ -0.27
ARHGEF39-204ENST00000488918 PAGR1Q9BTK6 254 aa13.34□□□□□ -0.27
ARHGEF39-204ENST00000488918 ISY1Q9ULR0 285 aaKnown RBP13.34□□□□□ -0.27
ARHGEF39-204ENST00000488918 CTDP1Q9Y5B0 961 aaPredicted RBP13.34□□□□□ -0.27
ARHGEF39-204ENST00000488918 MYH1P12882 1939 aa13.34□□□□□ -0.27
ARHGEF39-204ENST00000488918 MYPNQ86TC9 1320 aa13.34□□□□□ -0.27
ARHGEF39-204ENST00000488918 TSPY3P0CV98 308 aa13.33□□□□□ -0.28
ARHGEF39-204ENST00000488918 TSPY8P0CW00 308 aa13.33□□□□□ -0.28
ARHGEF39-204ENST00000488918 SOX10P56693 466 aa13.33□□□□□ -0.28
ARHGEF39-204ENST00000488918 UBXN2AP68543 259 aa13.33□□□□□ -0.28
ARHGEF39-204ENST00000488918 WDR78Q5VTH9 848 aa13.33□□□□□ -0.28
ARHGEF39-204ENST00000488918 PLEKHM2Q8IWE5 1019 aa13.33□□□□□ -0.28
ARHGEF39-204ENST00000488918 LPAR1Q92633 364 aa13.33□□□□□ -0.28
ARHGEF39-204ENST00000488918 SEC62Q99442 399 aaKnown RBP13.33□□□□□ -0.28
ARHGEF39-204ENST00000488918 ARHGAP39Q9C0H5 1083 aa13.33□□□□□ -0.28
ARHGEF39-204ENST00000488918 EMILIN3Q9NT22 766 aa13.33□□□□□ -0.28
ARHGEF39-204ENST00000488918 SRRDQ9UH36 339 aa13.33□□□□□ -0.28
ARHGEF39-204ENST00000488918 NAV1Q8NEY1 1877 aa13.33□□□□□ -0.28
ARHGEF39-204ENST00000488918 FOCADQ5VW36 1801 aa13.32□□□□□ -0.28
ARHGEF39-204ENST00000488918 BCRP11274 1271 aa13.32□□□□□ -0.28
ARHGEF39-204ENST00000488918 AKR1B1P15121 316 aa13.32□□□□□ -0.28
ARHGEF39-204ENST00000488918 HERVK_113P62684 666 aa13.32□□□□□ -0.28
ARHGEF39-204ENST00000488918 JAG1P78504 1218 aa13.32□□□□□ -0.28
ARHGEF39-204ENST00000488918 MLLT1Q03111 559 aaPredicted RBP13.32□□□□□ -0.28
ARHGEF39-204ENST00000488918 SHROOM1Q2M3G4 852 aaPredicted RBP13.32□□□□□ -0.28
ARHGEF39-204ENST00000488918 P2RX7Q99572 595 aaKnown RBP13.32□□□□□ -0.28
ARHGEF39-204ENST00000488918 OSBPL3Q9H4L5 887 aa13.32□□□□□ -0.28
ARHGEF39-204ENST00000488918 RPAP3Q9H6T3 665 aaPredicted RBP13.32□□□□□ -0.28
ARHGEF39-204ENST00000488918 HOXC10Q9NYD6 342 aa13.32□□□□□ -0.28
ARHGEF39-204ENST00000488918 PTCH2Q9Y6C5 1203 aa13.32□□□□□ -0.28
ARHGEF39-204ENST00000488918 SALL3Q9BXA9 1300 aa13.32□□□□□ -0.28
ARHGEF39-204ENST00000488918 LAMB1P07942 1786 aa13.31□□□□□ -0.28
ARHGEF39-204ENST00000488918 VCAM1P19320 739 aa13.31□□□□□ -0.28
ARHGEF39-204ENST00000488918 MAPK4P31152 587 aa13.31□□□□□ -0.28
ARHGEF39-204ENST00000488918 PPARAQ07869 468 aa13.31□□□□□ -0.28
ARHGEF39-204ENST00000488918 CCDC129Q6ZRS4 1044 aa13.31□□□□□ -0.28
ARHGEF39-204ENST00000488918 ACER1Q8TDN7 264 aa13.31□□□□□ -0.28
ARHGEF39-204ENST00000488918 RUFY2Q8WXA3 655 aa13.31□□□□□ -0.28
ARHGEF39-204ENST00000488918 C12orf42Q96LP6 360 aa13.31□□□□□ -0.28
ARHGEF39-204ENST00000488918 IVNS1ABPQ9Y6Y0 642 aa13.31□□□□□ -0.28
ARHGEF39-204ENST00000488918 TSPY2A6NKD2 308 aa13.3□□□□□ -0.28
ARHGEF39-204ENST00000488918 PRDM1O75626 825 aa13.3□□□□□ -0.28
ARHGEF39-204ENST00000488918 FLOT1O75955 427 aa13.3□□□□□ -0.28
ARHGEF39-204ENST00000488918 MYCP01106 439 aaPredicted RBP13.3□□□□□ -0.28
ARHGEF39-204ENST00000488918 EEF2P13639 858 aaKnown RBP13.3□□□□□ -0.28
ARHGEF39-204ENST00000488918 SDSP20132 328 aa13.3□□□□□ -0.28
ARHGEF39-204ENST00000488918 GRK4P32298 578 aa13.3□□□□□ -0.28
ARHGEF39-204ENST00000488918 NMIQ13287 307 aaPredicted RBP13.3□□□□□ -0.28
ARHGEF39-204ENST00000488918 COG2Q14746 738 aa13.3□□□□□ -0.28
ARHGEF39-204ENST00000488918 CWC27Q6UX04 472 aaKnown RBP13.3□□□□□ -0.28
ARHGEF39-204ENST00000488918 CATSPERGQ6ZRH7 1159 aa13.3□□□□□ -0.28
ARHGEF39-204ENST00000488918 SPICE1Q8N0Z3 855 aa13.3□□□□□ -0.28
ARHGEF39-204ENST00000488918 SLAIN1Q8ND83 568 aa13.3□□□□□ -0.28
ARHGEF39-204ENST00000488918 ADGRA2Q96PE1 1338 aa13.3□□□□□ -0.28
ARHGEF39-204ENST00000488918 CDK5RAP2Q96SN8 1893 aa13.29□□□□□ -0.28
ARHGEF39-204ENST00000488918 RANBP6O60518 1105 aaKnown RBP13.29□□□□□ -0.28
ARHGEF39-204ENST00000488918 EVX2Q03828 476 aa13.29□□□□□ -0.28
ARHGEF39-204ENST00000488918 PRKCZQ05513 592 aa13.29□□□□□ -0.28
ARHGEF39-204ENST00000488918 PLS1Q14651 629 aa13.29□□□□□ -0.28
ARHGEF39-204ENST00000488918 RRP12Q5JTH9 1297 aaKnown RBP13.29□□□□□ -0.28
ARHGEF39-204ENST00000488918 FAM227BQ96M60 508 aa13.29□□□□□ -0.28
ARHGEF39-204ENST00000488918 VCPKMTQ9H867 229 aa13.29□□□□□ -0.28
ARHGEF39-204ENST00000488918 EPB41L4AQ9HCS5 686 aaPredicted RBP13.29□□□□□ -0.28
ARHGEF39-204ENST00000488918 CLIP2Q9UDT6 1046 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms