RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 STX8Q9UNK0 236 aa12.74□□□□□ -0.37
COL21A1-211ENST00000488912 TCHHQ07283 1943 aa12.74□□□□□ -0.37
COL21A1-211ENST00000488912 VPS37CA5D8V6 355 aaPredicted RBP12.74□□□□□ -0.37
COL21A1-211ENST00000488912 DDAH1O94760 285 aa12.74□□□□□ -0.37
COL21A1-211ENST00000488912 KIF4BQ2VIQ3 1234 aa12.74□□□□□ -0.37
COL21A1-211ENST00000488912 CCDC178Q5BJE1 867 aa12.74□□□□□ -0.37
COL21A1-211ENST00000488912 METTL16Q86W50 562 aaKnown RBP12.74□□□□□ -0.37
COL21A1-211ENST00000488912 CDAN1Q8IWY9 1227 aa12.74□□□□□ -0.37
COL21A1-211ENST00000488912 ANKS1AQ92625 1134 aa12.74□□□□□ -0.37
COL21A1-211ENST00000488912 TRIM34Q9BYJ4 488 aa12.74□□□□□ -0.37
COL21A1-211ENST00000488912 TMEM39BQ9GZU3 492 aa12.74□□□□□ -0.37
COL21A1-211ENST00000488912 KAT14Q9H8E8 782 aa12.74□□□□□ -0.37
COL21A1-211ENST00000488912 GPRC5DQ9NZD1 345 aa12.74□□□□□ -0.37
COL21A1-211ENST00000488912 SCAF8Q9UPN6 1271 aaKnown RBP12.74□□□□□ -0.37
COL21A1-211ENST00000488912 MTMR6Q9Y217 621 aa12.74□□□□□ -0.37
COL21A1-211ENST00000488912 ASTN2O75129 1339 aaPredicted RBP12.74□□□□□ -0.37
COL21A1-211ENST00000488912 CDKL5O76039 1030 aa12.73□□□□□ -0.37
COL21A1-211ENST00000488912 ZSCAN22P10073 491 aaPredicted RBP12.73□□□□□ -0.37
COL21A1-211ENST00000488912 C9orf131Q5VYM1 1079 aa12.73□□□□□ -0.37
COL21A1-211ENST00000488912 CDC37L1Q7L3B6 337 aa12.73□□□□□ -0.37
COL21A1-211ENST00000488912 FAM83AQ86UY5 434 aa12.73□□□□□ -0.37
COL21A1-211ENST00000488912 FOXP4Q8IVH2 680 aaPredicted RBP12.73□□□□□ -0.37
COL21A1-211ENST00000488912 PNMA1Q8ND90 353 aa12.73□□□□□ -0.37
COL21A1-211ENST00000488912 PHKBQ93100 1093 aa12.73□□□□□ -0.37
COL21A1-211ENST00000488912 CALM1P0DP23 149 aa12.73□□□□□ -0.37
COL21A1-211ENST00000488912 CALM2P0DP24 149 aa12.73□□□□□ -0.37
COL21A1-211ENST00000488912 CALM3P0DP25 149 aa12.73□□□□□ -0.37
COL21A1-211ENST00000488912 GPR162Q16538 588 aa12.73□□□□□ -0.37
COL21A1-211ENST00000488912 CPLX2Q6PUV4 134 aaKnown RBP12.73□□□□□ -0.37
COL21A1-211ENST00000488912 CLEC10AQ8IUN9 316 aa12.73□□□□□ -0.37
COL21A1-211ENST00000488912 CMTR1Q8N1G2 835 aaKnown RBP12.73□□□□□ -0.37
COL21A1-211ENST00000488912 TMEM47Q9BQJ4 181 aa12.73□□□□□ -0.37
COL21A1-211ENST00000488912 ORC3Q9UBD5 711 aaPredicted RBP12.73□□□□□ -0.37
COL21A1-211ENST00000488912 BAZ2BQ9UIF8 2168 aaKnown RBP12.73□□□□□ -0.37
COL21A1-211ENST00000488912 IGKV6D-41A0A0C4DH26 115 aa12.72□□□□□ -0.37
COL21A1-211ENST00000488912 CCDC196A0A1B0GTZ2 297 aa12.72□□□□□ -0.37
COL21A1-211ENST00000488912 H7C1D1 291 aa12.72□□□□□ -0.37
COL21A1-211ENST00000488912 DDNO94850 711 aaPredicted RBP12.72□□□□□ -0.37
COL21A1-211ENST00000488912 FOSBP53539 338 aa12.72□□□□□ -0.37
COL21A1-211ENST00000488912 SHROOM1Q2M3G4 852 aaPredicted RBP12.72□□□□□ -0.37
COL21A1-211ENST00000488912 TATDN1Q6P1N9 297 aa12.72□□□□□ -0.37
COL21A1-211ENST00000488912 TRPM4Q8TD43 1214 aa12.72□□□□□ -0.37
COL21A1-211ENST00000488912 CHAMP1Q96JM3 812 aa12.72□□□□□ -0.37
COL21A1-211ENST00000488912 TAOK2Q9UL54 1235 aa12.72□□□□□ -0.37
COL21A1-211ENST00000488912 KIF3AQ9Y496 699 aa12.72□□□□□ -0.37
COL21A1-211ENST00000488912 MPHOSPH10O00566 681 aaKnown RBP12.72□□□□□ -0.37
COL21A1-211ENST00000488912 IFNAR1P17181 557 aa12.72□□□□□ -0.37
COL21A1-211ENST00000488912 NOVP48745 357 aa12.72□□□□□ -0.37
COL21A1-211ENST00000488912 CERKLQ49MI3 558 aaPredicted RBP12.72□□□□□ -0.37
COL21A1-211ENST00000488912 CLEC17AQ6ZS10 378 aa12.72□□□□□ -0.37
COL21A1-211ENST00000488912 MTMR4Q9NYA4 1195 aa12.72□□□□□ -0.37
COL21A1-211ENST00000488912 PGAP2Q9UHJ9 254 aa12.72□□□□□ -0.37
COL21A1-211ENST00000488912 HACL1Q9UJ83 578 aa12.72□□□□□ -0.37
COL21A1-211ENST00000488912 UBE2Q2LH0YL09 131 aa12.71□□□□□ -0.37
COL21A1-211ENST00000488912 BAG4O95429 457 aaKnown RBP12.71□□□□□ -0.37
COL21A1-211ENST00000488912 F13A1P00488 732 aa12.71□□□□□ -0.37
COL21A1-211ENST00000488912 EPS15P42566 896 aa12.71□□□□□ -0.37
COL21A1-211ENST00000488912 RASA3Q14644 834 aa12.71□□□□□ -0.37
COL21A1-211ENST00000488912 PPP2R5BQ15173 497 aa12.71□□□□□ -0.37
COL21A1-211ENST00000488912 CCDC82Q8N4S0 544 aa12.71□□□□□ -0.37
COL21A1-211ENST00000488912 CTCFLQ8NI51 663 aaPredicted RBP12.71□□□□□ -0.37
COL21A1-211ENST00000488912 CCDC17Q96LX7 622 aa12.71□□□□□ -0.37
COL21A1-211ENST00000488912 GBP4Q96PP9 640 aa12.71□□□□□ -0.37
COL21A1-211ENST00000488912 HERC5Q9UII4 1024 aaKnown RBP12.71□□□□□ -0.37
COL21A1-211ENST00000488912 POLR2AP24928 1970 aaKnown RBP12.71□□□□□ -0.37
COL21A1-211ENST00000488912 GDF11O95390 407 aa12.71□□□□□ -0.38
COL21A1-211ENST00000488912 PLEKHA8P1O95397 391 aa12.71□□□□□ -0.38
COL21A1-211ENST00000488912 PDIA4P13667 645 aaKnown RBP12.71□□□□□ -0.38
COL21A1-211ENST00000488912 TNNI2P48788 182 aa12.71□□□□□ -0.38
COL21A1-211ENST00000488912 TNFAIP1Q13829 316 aa12.71□□□□□ -0.38
COL21A1-211ENST00000488912 RASGRP2Q7LDG7 609 aa12.71□□□□□ -0.38
COL21A1-211ENST00000488912 NBPF11Q86T75 865 aa12.71□□□□□ -0.38
COL21A1-211ENST00000488912 AIFM3Q96NN9 605 aa12.71□□□□□ -0.38
COL21A1-211ENST00000488912 SLC26A6Q9BXS9 759 aa12.71□□□□□ -0.38
COL21A1-211ENST00000488912 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.71□□□□□ -0.38
COL21A1-211ENST00000488912 RBM28Q9NW13 759 aaKnown RBP12.71□□□□□ -0.38
COL21A1-211ENST00000488912 MYH15Q9Y2K3 1946 aa12.7□□□□□ -0.38
COL21A1-211ENST00000488912 STK36Q9NRP7 1315 aa12.7□□□□□ -0.38
COL21A1-211ENST00000488912 H3BQV1 296 aa12.7□□□□□ -0.38
COL21A1-211ENST00000488912 FMNL1O95466 1100 aaPredicted RBP12.7□□□□□ -0.38
COL21A1-211ENST00000488912 TOP1P11387 765 aaKnown RBP12.7□□□□□ -0.38
COL21A1-211ENST00000488912 MCM4P33991 863 aa12.7□□□□□ -0.38
COL21A1-211ENST00000488912 RRP1BQ14684 758 aaKnown RBP12.7□□□□□ -0.38
COL21A1-211ENST00000488912 FOXD4L6Q3SYB3 417 aaPredicted RBP12.7□□□□□ -0.38
COL21A1-211ENST00000488912 IFFO2Q5TF58 517 aa12.7□□□□□ -0.38
COL21A1-211ENST00000488912 FOXD4L3Q6VB84 417 aaPredicted RBP12.7□□□□□ -0.38
COL21A1-211ENST00000488912 FERMT3Q86UX7 667 aa12.7□□□□□ -0.38
COL21A1-211ENST00000488912 MTMR7Q9Y216 660 aa12.7□□□□□ -0.38
COL21A1-211ENST00000488912 TTLL1O95922 423 aa12.7□□□□□ -0.38
COL21A1-211ENST00000488912 GUCY1B3Q02153 619 aa12.7□□□□□ -0.38
COL21A1-211ENST00000488912 SSRP1Q08945 709 aaKnown RBP12.7□□□□□ -0.38
COL21A1-211ENST00000488912 FUT2Q10981 343 aa12.7□□□□□ -0.38
COL21A1-211ENST00000488912 TMTC3Q6ZXV5 915 aa12.7□□□□□ -0.38
COL21A1-211ENST00000488912 LRRC47Q8N1G4 583 aaKnown RBP12.7□□□□□ -0.38
COL21A1-211ENST00000488912 TEPSINQ96N21 525 aa12.7□□□□□ -0.38
COL21A1-211ENST00000488912 GJB4Q9NTQ9 266 aa12.7□□□□□ -0.38
COL21A1-211ENST00000488912 ATAD5Q96QE3 1844 aa12.69□□□□□ -0.38
COL21A1-211ENST00000488912 GUCY1A2P33402 732 aa12.69□□□□□ -0.38
COL21A1-211ENST00000488912 HIRAP54198 1017 aaPredicted RBP12.69□□□□□ -0.38
COL21A1-211ENST00000488912 JAG1P78504 1218 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms