RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 ZNF76P36508 570 aa8.25□□□□□ -1.09
PTPN4-212ENST00000488896 CRKP46108 304 aa8.25□□□□□ -1.09
PTPN4-212ENST00000488896 SEZ6Q53EL9 994 aa8.25□□□□□ -1.09
PTPN4-212ENST00000488896 PHACTR4Q8IZ21 702 aa8.25□□□□□ -1.09
PTPN4-212ENST00000488896 CYB5D2Q8WUJ1 264 aa8.25□□□□□ -1.09
PTPN4-212ENST00000488896 ZSWIM5Q9P217 1185 aa8.25□□□□□ -1.09
PTPN4-212ENST00000488896 PCDHB14Q9Y5E9 798 aa8.25□□□□□ -1.09
PTPN4-212ENST00000488896 GREM1O60565 184 aa8.24□□□□□ -1.09
PTPN4-212ENST00000488896 DNAJA2O60884 412 aa8.24□□□□□ -1.09
PTPN4-212ENST00000488896 MCM4P33991 863 aa8.24□□□□□ -1.09
PTPN4-212ENST00000488896 TNK2Q07912 1038 aa8.24□□□□□ -1.09
PTPN4-212ENST00000488896 C22orf34Q6ZV56 151 aa8.24□□□□□ -1.09
PTPN4-212ENST00000488896 BAHD1Q8TBE0 780 aaPredicted RBP8.24□□□□□ -1.09
PTPN4-212ENST00000488896 PPP1R13LQ8WUF5 828 aa8.24□□□□□ -1.09
PTPN4-212ENST00000488896 UBE2FQ969M7 185 aa8.24□□□□□ -1.09
PTPN4-212ENST00000488896 KRTAP4-8Q9BYQ9 185 aa8.24□□□□□ -1.09
PTPN4-212ENST00000488896 SEMA3GQ9NS98 782 aa8.24□□□□□ -1.09
PTPN4-212ENST00000488896 PRR36Q9H6K5 1346 aa8.24□□□□□ -1.09
PTPN4-212ENST00000488896 APOBRQ0VD83 1088 aa8.23□□□□□ -1.09
PTPN4-212ENST00000488896 LRRN4CLQ8ND94 238 aa8.23□□□□□ -1.09
PTPN4-212ENST00000488896 KIF2CQ99661 725 aa8.23□□□□□ -1.09
PTPN4-212ENST00000488896 CARS2Q9HA77 564 aaKnown RBP8.23□□□□□ -1.09
PTPN4-212ENST00000488896 KCNQ5Q9NR82 932 aa8.23□□□□□ -1.09
PTPN4-212ENST00000488896 RNF114Q9Y508 228 aa8.23□□□□□ -1.09
PTPN4-212ENST00000488896 ST14Q9Y5Y6 855 aa8.23□□□□□ -1.09
PTPN4-212ENST00000488896 KIR3DL1P43629 444 aa8.22□□□□□ -1.09
PTPN4-212ENST00000488896 MLECQ14165 292 aa8.22□□□□□ -1.09
PTPN4-212ENST00000488896 ZNF394Q53GI3 561 aa8.22□□□□□ -1.09
PTPN4-212ENST00000488896 GK5Q6ZS86 529 aa8.22□□□□□ -1.09
PTPN4-212ENST00000488896 SLFN12Q8IYM2 578 aa8.22□□□□□ -1.09
PTPN4-212ENST00000488896 COX4I2Q96KJ9 171 aa8.22□□□□□ -1.09
PTPN4-212ENST00000488896 PCDHGB7Q9Y5F8 929 aa8.22□□□□□ -1.09
PTPN4-212ENST00000488896 ROBO2Q9HCK4 1378 aa8.22□□□□□ -1.09
PTPN4-212ENST00000488896 WASH4PA8MWX3 477 aa8.21□□□□□ -1.1
PTPN4-212ENST00000488896 LRRN2O75325 713 aa8.21□□□□□ -1.1
PTPN4-212ENST00000488896 GBP1P32455 592 aa8.21□□□□□ -1.1
PTPN4-212ENST00000488896 CHMP4BP1P59074 171 aa8.21□□□□□ -1.1
PTPN4-212ENST00000488896 FANCCQ00597 558 aa8.21□□□□□ -1.1
PTPN4-212ENST00000488896 ARSHQ5FYA8 562 aa8.21□□□□□ -1.1
PTPN4-212ENST00000488896 SLC23A3Q6PIS1 610 aa8.21□□□□□ -1.1
PTPN4-212ENST00000488896 USP48Q86UV5 1035 aa8.21□□□□□ -1.1
PTPN4-212ENST00000488896 KIAA0825Q8IV33 1275 aa8.21□□□□□ -1.1
PTPN4-212ENST00000488896 CCDC74BQ96LY2 380 aa8.21□□□□□ -1.1
PTPN4-212ENST00000488896 Q96M66 194 aa8.21□□□□□ -1.1
PTPN4-212ENST00000488896 SPON2Q9BUD6 331 aa8.21□□□□□ -1.1
PTPN4-212ENST00000488896 LRRC3Q9BY71 257 aa8.21□□□□□ -1.1
PTPN4-212ENST00000488896 SLC22A31A6NKX4 558 aa8.2□□□□□ -1.1
PTPN4-212ENST00000488896 CLCQ05315 142 aa8.2□□□□□ -1.1
PTPN4-212ENST00000488896 NKD1Q969G9 470 aa8.2□□□□□ -1.1
PTPN4-212ENST00000488896 BIN1O00499 593 aa8.19□□□□□ -1.1
PTPN4-212ENST00000488896 RAG1P15918 1043 aa8.19□□□□□ -1.1
PTPN4-212ENST00000488896 ITGB5P18084 799 aa8.19□□□□□ -1.1
PTPN4-212ENST00000488896 RNF34Q969K3 372 aa8.19□□□□□ -1.1
PTPN4-212ENST00000488896 EAF1Q96JC9 268 aaPredicted RBP8.19□□□□□ -1.1
PTPN4-212ENST00000488896 KREMEN1Q96MU8 473 aa8.19□□□□□ -1.1
PTPN4-212ENST00000488896 PAPLNO95428 1278 aa8.18□□□□□ -1.1
PTPN4-212ENST00000488896 RECKO95980 971 aa8.18□□□□□ -1.1
PTPN4-212ENST00000488896 JUNBP17275 347 aaPredicted RBP8.18□□□□□ -1.1
PTPN4-212ENST00000488896 OVOS1Q6IE37 1185 aa8.18□□□□□ -1.1
PTPN4-212ENST00000488896 THAP5Q7Z6K1 395 aa8.18□□□□□ -1.1
PTPN4-212ENST00000488896 DTWD2Q8NBA8 298 aa8.18□□□□□ -1.1
PTPN4-212ENST00000488896 PIWIL2Q8TC59 973 aaKnown RBP8.18□□□□□ -1.1
PTPN4-212ENST00000488896 ASIC4Q96FT7 647 aa8.18□□□□□ -1.1
PTPN4-212ENST00000488896 KCNH3Q9ULD8 1083 aa8.18□□□□□ -1.1
PTPN4-212ENST00000488896 TPP2P29144 1249 aaPredicted RBP8.17□□□□□ -1.1
PTPN4-212ENST00000488896 POLR2BP30876 1174 aaKnown RBP8.17□□□□□ -1.1
PTPN4-212ENST00000488896 CREG2Q8IUH2 290 aa8.17□□□□□ -1.1
PTPN4-212ENST00000488896 RNF141Q8WVD5 230 aa8.17□□□□□ -1.1
PTPN4-212ENST00000488896 NT5C1AQ9BXI3 368 aa8.17□□□□□ -1.1
PTPN4-212ENST00000488896 DUSP15Q9H1R2 295 aaPredicted RBP8.17□□□□□ -1.1
PTPN4-212ENST00000488896 ANTXR1Q9H6X2 564 aa8.17□□□□□ -1.1
PTPN4-212ENST00000488896 METTL5Q9NRN9 209 aaKnown RBP8.17□□□□□ -1.1
PTPN4-212ENST00000488896 LMCD1Q9NZU5 365 aa8.17□□□□□ -1.1
PTPN4-212ENST00000488896 GMIPQ9P107 970 aa8.17□□□□□ -1.1
PTPN4-212ENST00000488896 ATE1O95260 518 aa8.16□□□□□ -1.1
PTPN4-212ENST00000488896 ZNF165P49910 485 aa8.16□□□□□ -1.1
PTPN4-212ENST00000488896 ATG4DQ86TL0 474 aaPredicted RBP8.16□□□□□ -1.1
PTPN4-212ENST00000488896 MRRFQ96E11 262 aaKnown RBP8.16□□□□□ -1.1
PTPN4-212ENST00000488896 EHMT1Q9H9B1 1298 aa8.16□□□□□ -1.1
PTPN4-212ENST00000488896 GPATCH2Q9NW75 528 aa8.16□□□□□ -1.1
PTPN4-212ENST00000488896 SLAMF8Q9P0V8 285 aa8.16□□□□□ -1.1
PTPN4-212ENST00000488896 SCAMP3O14828 347 aaKnown RBP8.15□□□□□ -1.1
PTPN4-212ENST00000488896 RGS13O14921 159 aa8.15□□□□□ -1.1
PTPN4-212ENST00000488896 UBOX5O94941 541 aa8.15□□□□□ -1.1
PTPN4-212ENST00000488896 C9orf131Q5VYM1 1079 aa8.15□□□□□ -1.1
PTPN4-212ENST00000488896 ATG4CQ96DT6 458 aa8.15□□□□□ -1.1
PTPN4-212ENST00000488896 TRIT1Q9H3H1 467 aaKnown RBP8.15□□□□□ -1.1
PTPN4-212ENST00000488896 ESR1P03372 595 aa8.14□□□□□ -1.11
PTPN4-212ENST00000488896 RACK1P63244 317 aaKnown RBP8.14□□□□□ -1.11
PTPN4-212ENST00000488896 SLITRK4Q8IW52 837 aa8.14□□□□□ -1.11
PTPN4-212ENST00000488896 REXO1Q8N1G1 1221 aaKnown RBP8.14□□□□□ -1.11
PTPN4-212ENST00000488896 RGS22Q8NE09 1264 aa8.14□□□□□ -1.11
PTPN4-212ENST00000488896 FAM168AQ92567 244 aa8.14□□□□□ -1.11
PTPN4-212ENST00000488896 DUSP13Q9UII6 198 aa8.14□□□□□ -1.11
PTPN4-212ENST00000488896 CTNND2Q9UQB3 1225 aa8.14□□□□□ -1.11
PTPN4-212ENST00000488896 FAM86C2PA6NEL3 165 aa8.13□□□□□ -1.11
PTPN4-212ENST00000488896 UNCXA6NJT0 531 aa8.13□□□□□ -1.11
PTPN4-212ENST00000488896 FBXW10Q5XX13 1052 aa8.13□□□□□ -1.11
PTPN4-212ENST00000488896 NLRC3Q7RTR2 1065 aa8.13□□□□□ -1.11
PTPN4-212ENST00000488896 TMPRSS7Q7RTY8 843 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms