RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 ZKSCAN3Q9BRR0 538 aa15.4■□□□□ 0.06
CHD1L-208ENST00000488864 CBX8Q9HC52 389 aa15.4■□□□□ 0.06
CHD1L-208ENST00000488864 GPRC5DQ9NZD1 345 aa15.4■□□□□ 0.06
CHD1L-208ENST00000488864 ZSWIM5Q9P217 1185 aa15.4■□□□□ 0.06
CHD1L-208ENST00000488864 DDTLA6NHG4 134 aaPredicted RBP15.39■□□□□ 0.05
CHD1L-208ENST00000488864 H7C1D1 291 aa15.39■□□□□ 0.05
CHD1L-208ENST00000488864 RANBP6O60518 1105 aaKnown RBP15.39■□□□□ 0.05
CHD1L-208ENST00000488864 ANTXR2P58335 489 aa15.39■□□□□ 0.05
CHD1L-208ENST00000488864 NAA30Q147X3 362 aaPredicted RBP15.39■□□□□ 0.05
CHD1L-208ENST00000488864 ANO6Q4KMQ2 910 aa15.39■□□□□ 0.05
CHD1L-208ENST00000488864 LARP1BQ659C4 914 aaKnown RBP15.39■□□□□ 0.05
CHD1L-208ENST00000488864 TRPM4Q8TD43 1214 aa15.39■□□□□ 0.05
CHD1L-208ENST00000488864 C16orf45Q96MC5 204 aaPredicted RBP15.39■□□□□ 0.05
CHD1L-208ENST00000488864 IDI2Q9BXS1 227 aa15.39■□□□□ 0.05
CHD1L-208ENST00000488864 TMOD2Q9NZR1 351 aa15.39■□□□□ 0.05
CHD1L-208ENST00000488864 NAV1Q8NEY1 1877 aa15.39■□□□□ 0.05
CHD1L-208ENST00000488864 PRC1O43663 620 aa15.39■□□□□ 0.05
CHD1L-208ENST00000488864 MYO1BO43795 1136 aa15.39■□□□□ 0.05
CHD1L-208ENST00000488864 HMGB1P09429 215 aaKnown RBP15.39■□□□□ 0.05
CHD1L-208ENST00000488864 KIF4BQ2VIQ3 1234 aa15.39■□□□□ 0.05
CHD1L-208ENST00000488864 SPDYE2Q495Y8 402 aa15.39■□□□□ 0.05
CHD1L-208ENST00000488864 ZBED3Q96IU2 234 aaPredicted RBP15.39■□□□□ 0.05
CHD1L-208ENST00000488864 RNF41Q9H4P4 317 aaPredicted RBP15.39■□□□□ 0.05
CHD1L-208ENST00000488864 SH2B1Q9NRF2 756 aaPredicted RBP15.39■□□□□ 0.05
CHD1L-208ENST00000488864 LAMA4Q16363 1823 aa15.39■□□□□ 0.05
CHD1L-208ENST00000488864 TIAM2Q8IVF5 1701 aa15.39■□□□□ 0.05
CHD1L-208ENST00000488864 FAM196BA6NMK8 535 aa15.38■□□□□ 0.05
CHD1L-208ENST00000488864 KRT85P78386 507 aa15.38■□□□□ 0.05
CHD1L-208ENST00000488864 EXOSC10Q01780 885 aaKnown RBP15.38■□□□□ 0.05
CHD1L-208ENST00000488864 TOB2Q14106 344 aaPredicted RBP15.38■□□□□ 0.05
CHD1L-208ENST00000488864 FAM47AQ5JRC9 791 aa15.38■□□□□ 0.05
CHD1L-208ENST00000488864 SH3BP5LQ7L8J4 393 aa15.38■□□□□ 0.05
CHD1L-208ENST00000488864 MTMR14Q8NCE2 650 aa15.38■□□□□ 0.05
CHD1L-208ENST00000488864 BRF1Q92994 677 aa15.38■□□□□ 0.05
CHD1L-208ENST00000488864 MYH1P12882 1939 aa15.38■□□□□ 0.05
CHD1L-208ENST00000488864 CDAN1Q8IWY9 1227 aa15.38■□□□□ 0.05
CHD1L-208ENST00000488864 DRC7Q8IY82 874 aa15.38■□□□□ 0.05
CHD1L-208ENST00000488864 MKNK2Q9HBH9 465 aa15.38■□□□□ 0.05
CHD1L-208ENST00000488864 DACT1Q9NYF0 836 aa15.38■□□□□ 0.05
CHD1L-208ENST00000488864 TFIP11Q9UBB9 837 aaKnown RBP15.38■□□□□ 0.05
CHD1L-208ENST00000488864 SLC3A2P08195 630 aaKnown RBP15.37■□□□□ 0.05
CHD1L-208ENST00000488864 PDE4BQ07343 736 aa15.37■□□□□ 0.05
CHD1L-208ENST00000488864 DPY19L2Q6NUT2 758 aa15.37■□□□□ 0.05
CHD1L-208ENST00000488864 KRT23Q9C075 422 aa15.37■□□□□ 0.05
CHD1L-208ENST00000488864 TMEM39BQ9GZU3 492 aa15.37■□□□□ 0.05
CHD1L-208ENST00000488864 TNMDQ9H2S6 317 aa15.37■□□□□ 0.05
CHD1L-208ENST00000488864 CNNM2Q9H8M5 875 aa15.37■□□□□ 0.05
CHD1L-208ENST00000488864 ECM29Q5VYK3 1845 aa15.37■□□□□ 0.05
CHD1L-208ENST00000488864 KIF20AO95235 890 aa15.37■□□□□ 0.05
CHD1L-208ENST00000488864 ZNF75DP51815 510 aa15.37■□□□□ 0.05
CHD1L-208ENST00000488864 NAP1L2Q9ULW6 460 aaPredicted RBP15.37■□□□□ 0.05
CHD1L-208ENST00000488864 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.37■□□□□ 0.05
CHD1L-208ENST00000488864 TNNT1P13805 278 aa15.36■□□□□ 0.05
CHD1L-208ENST00000488864 CDK8P49336 464 aa15.36■□□□□ 0.05
CHD1L-208ENST00000488864 PLA2G4DQ86XP0 818 aa15.36■□□□□ 0.05
CHD1L-208ENST00000488864 ESR2Q92731 530 aa15.36■□□□□ 0.05
CHD1L-208ENST00000488864 SENP2Q9HC62 589 aa15.36■□□□□ 0.05
CHD1L-208ENST00000488864 FOCADQ5VW36 1801 aa15.36■□□□□ 0.05
CHD1L-208ENST00000488864 NMT2O60551 498 aa15.36■□□□□ 0.05
CHD1L-208ENST00000488864 HIRAP54198 1017 aaPredicted RBP15.36■□□□□ 0.05
CHD1L-208ENST00000488864 APOBRQ0VD83 1088 aa15.36■□□□□ 0.05
CHD1L-208ENST00000488864 STK3Q13188 491 aa15.36■□□□□ 0.05
CHD1L-208ENST00000488864 TRIM5Q9C035 493 aa15.36■□□□□ 0.05
CHD1L-208ENST00000488864 SERPINB13Q9UIV8 391 aa15.36■□□□□ 0.05
CHD1L-208ENST00000488864 HACL1Q9UJ83 578 aa15.36■□□□□ 0.05
CHD1L-208ENST00000488864 ELP1O95163 1332 aa15.36■□□□□ 0.05
CHD1L-208ENST00000488864 SMTNL1A8MU46 457 aa15.35■□□□□ 0.05
CHD1L-208ENST00000488864 HLA-DOAP06340 250 aa15.35■□□□□ 0.05
CHD1L-208ENST00000488864 LMOD1P29536 600 aaPredicted RBP15.35■□□□□ 0.05
CHD1L-208ENST00000488864 C16orf86Q6ZW13 317 aa15.35■□□□□ 0.05
CHD1L-208ENST00000488864 RAB11FIP4Q86YS3 637 aa15.35■□□□□ 0.05
CHD1L-208ENST00000488864 CSRNP1Q96S65 589 aa15.35■□□□□ 0.05
CHD1L-208ENST00000488864 LAMB1P07942 1786 aa15.35■□□□□ 0.05
CHD1L-208ENST00000488864 DDX60LQ5H9U9 1706 aaKnown RBP15.35■□□□□ 0.05
CHD1L-208ENST00000488864 CNTNAP1P78357 1384 aa15.35■□□□□ 0.05
CHD1L-208ENST00000488864 TSPY2A6NKD2 308 aa15.35■□□□□ 0.05
CHD1L-208ENST00000488864 IFIT3O14879 490 aaKnown RBP15.35■□□□□ 0.05
CHD1L-208ENST00000488864 ENTPD3O75355 529 aa15.35■□□□□ 0.05
CHD1L-208ENST00000488864 FGRP09769 529 aa15.35■□□□□ 0.05
CHD1L-208ENST00000488864 CCDC144BQ3MJ40 725 aa15.35■□□□□ 0.05
CHD1L-208ENST00000488864 CCDC144CPQ8IYA2 1237 aa15.35■□□□□ 0.05
CHD1L-208ENST00000488864 CACTINQ8WUQ7 758 aaKnown RBP15.35■□□□□ 0.05
CHD1L-208ENST00000488864 OGFRQ9NZT2 677 aa15.35■□□□□ 0.05
CHD1L-208ENST00000488864 ROBO3Q96MS0 1386 aa15.34■□□□□ 0.05
CHD1L-208ENST00000488864 TFAP4Q01664 338 aa15.34■□□□□ 0.05
CHD1L-208ENST00000488864 ANGEL2Q5VTE6 544 aaKnown RBP15.34■□□□□ 0.05
CHD1L-208ENST00000488864 CRACR2BQ8N4Y2 399 aaPredicted RBP15.34■□□□□ 0.05
CHD1L-208ENST00000488864 FEZ1Q99689 392 aa15.34■□□□□ 0.05
CHD1L-208ENST00000488864 DNAJC18Q9H819 358 aa15.34■□□□□ 0.05
CHD1L-208ENST00000488864 ORC4O43929 436 aa15.34■□□□□ 0.05
CHD1L-208ENST00000488864 RASA1P20936 1047 aa15.34■□□□□ 0.05
CHD1L-208ENST00000488864 GABPAQ06546 454 aa15.34■□□□□ 0.05
CHD1L-208ENST00000488864 RASA3Q14644 834 aa15.34■□□□□ 0.05
CHD1L-208ENST00000488864 TMEM67Q5HYA8 995 aa15.34■□□□□ 0.05
CHD1L-208ENST00000488864 ZNF444Q8N0Y2 327 aaPredicted RBP15.34■□□□□ 0.05
CHD1L-208ENST00000488864 SPATA32Q96LK8 384 aa15.34■□□□□ 0.05
CHD1L-208ENST00000488864 DHX36Q9H2U1 1008 aaKnown RBP15.34■□□□□ 0.05
CHD1L-208ENST00000488864 PI4KBQ9UBF8 816 aa15.34■□□□□ 0.05
CHD1L-208ENST00000488864 GLTPD2A6NH11 291 aa15.33■□□□□ 0.04
CHD1L-208ENST00000488864 NR1I2O75469 434 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms