RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 ARHGAP25P42331 645 aa18.21■□□□□ 0.51
MCF2L-229ENST00000488765 CCNI2Q6ZMN8 369 aaPredicted RBP18.21■□□□□ 0.51
MCF2L-229ENST00000488765 FAM228AQ86W67 206 aa18.21■□□□□ 0.51
MCF2L-229ENST00000488765 ESYT3A0FGR9 886 aa18.2■□□□□ 0.5
MCF2L-229ENST00000488765 C21orf2O43822 256 aa18.2■□□□□ 0.5
MCF2L-229ENST00000488765 YEATS4O95619 227 aa18.2■□□□□ 0.5
MCF2L-229ENST00000488765 GYPCP04921 128 aa18.2■□□□□ 0.5
MCF2L-229ENST00000488765 RASGRP2Q7LDG7 609 aa18.2■□□□□ 0.5
MCF2L-229ENST00000488765 NEUROD6Q96NK8 337 aa18.2■□□□□ 0.5
MCF2L-229ENST00000488765 SAR1BQ9Y6B6 198 aa18.2■□□□□ 0.5
MCF2L-229ENST00000488765 KDRP35968 1356 aa18.2■□□□□ 0.5
MCF2L-229ENST00000488765 ATP5J2-PTCD1G3V325 749 aa18.2■□□□□ 0.5
MCF2L-229ENST00000488765 MPHOSPH10O00566 681 aaKnown RBP18.2■□□□□ 0.5
MCF2L-229ENST00000488765 TRDNQ13061 729 aa18.2■□□□□ 0.5
MCF2L-229ENST00000488765 NAA35Q5VZE5 725 aa18.2■□□□□ 0.5
MCF2L-229ENST00000488765 BAIAP2L1Q9UHR4 511 aa18.2■□□□□ 0.5
MCF2L-229ENST00000488765 MED23Q9ULK4 1368 aa18.19■□□□□ 0.5
MCF2L-229ENST00000488765 CAND2O75155 1236 aa18.19■□□□□ 0.5
MCF2L-229ENST00000488765 RBM5P52756 815 aaKnown RBP eCLIP18.19■□□□□ 0.5
MCF2L-229ENST00000488765 SLC39A14Q15043 492 aa18.19■□□□□ 0.5
MCF2L-229ENST00000488765 LRRC1Q9BTT6 524 aa18.19■□□□□ 0.5
MCF2L-229ENST00000488765 DENND2AQ9ULE3 1009 aa18.19■□□□□ 0.5
MCF2L-229ENST00000488765 U3KPZ7 1027 aaPredicted RBP18.19■□□□□ 0.5
MCF2L-229ENST00000488765 GOLGA6L7A0A1B0GV03 622 aa18.19■□□□□ 0.5
MCF2L-229ENST00000488765 MCMDC2Q4G0Z9 681 aa18.19■□□□□ 0.5
MCF2L-229ENST00000488765 AKAP4Q5JQC9 854 aa18.19■□□□□ 0.5
MCF2L-229ENST00000488765 CCDC122Q5T0U0 273 aa18.19■□□□□ 0.5
MCF2L-229ENST00000488765 B4GALNT4Q76KP1 1039 aa18.19■□□□□ 0.5
MCF2L-229ENST00000488765 SMCR8Q8TEV9 937 aaPredicted RBP18.19■□□□□ 0.5
MCF2L-229ENST00000488765 KIF23Q02241 960 aaPredicted RBP18.19■□□□□ 0.5
MCF2L-229ENST00000488765 NNTQ13423 1086 aa18.19■□□□□ 0.5
MCF2L-229ENST00000488765 SNCBQ16143 134 aa18.19■□□□□ 0.5
MCF2L-229ENST00000488765 VPS37DQ86XT2 251 aa18.19■□□□□ 0.5
MCF2L-229ENST00000488765 NUTM2AQ8IVF1 878 aaPredicted RBP18.19■□□□□ 0.5
MCF2L-229ENST00000488765 JAKMIP2Q96AA8 810 aa18.19■□□□□ 0.5
MCF2L-229ENST00000488765 DBNDD2Q9BQY9 259 aa18.19■□□□□ 0.5
MCF2L-229ENST00000488765 ALDH8A1Q9H2A2 487 aaPredicted RBP18.19■□□□□ 0.5
MCF2L-229ENST00000488765 USP42Q9H9J4 1324 aaKnown RBP18.18■□□□□ 0.5
MCF2L-229ENST00000488765 MON2Q7Z3U7 1717 aa18.18■□□□□ 0.5
MCF2L-229ENST00000488765 MFAP3LO75121 409 aa18.18■□□□□ 0.5
MCF2L-229ENST00000488765 KCNB1Q14721 858 aa18.18■□□□□ 0.5
MCF2L-229ENST00000488765 VIPAS39Q9H9C1 493 aa18.18■□□□□ 0.5
MCF2L-229ENST00000488765 DBNLQ9UJU6 430 aaKnown RBP18.18■□□□□ 0.5
MCF2L-229ENST00000488765 KIF4AO95239 1232 aa18.18■□□□□ 0.5
MCF2L-229ENST00000488765 EZRP15311 586 aaKnown RBP18.18■□□□□ 0.5
MCF2L-229ENST00000488765 KRT9P35527 623 aa18.18■□□□□ 0.5
MCF2L-229ENST00000488765 GUCY2FP51841 1108 aa18.18■□□□□ 0.5
MCF2L-229ENST00000488765 AMPD2Q01433 879 aa18.18■□□□□ 0.5
MCF2L-229ENST00000488765 ATL3Q6DD88 541 aa18.18■□□□□ 0.5
MCF2L-229ENST00000488765 ZNF483Q8TF39 744 aaPredicted RBP18.18■□□□□ 0.5
MCF2L-229ENST00000488765 MYL10Q9BUA6 226 aa18.18■□□□□ 0.5
MCF2L-229ENST00000488765 TPX2Q9ULW0 747 aaKnown RBP18.18■□□□□ 0.5
MCF2L-229ENST00000488765 ZNF18P17022 549 aa18.17■□□□□ 0.5
MCF2L-229ENST00000488765 LSP1P33241 339 aa18.17■□□□□ 0.5
MCF2L-229ENST00000488765 DDR1Q08345 913 aa18.17■□□□□ 0.5
MCF2L-229ENST00000488765 POSTNQ15063 836 aa18.17■□□□□ 0.5
MCF2L-229ENST00000488765 MAEAQ7L5Y9 396 aa18.17■□□□□ 0.5
MCF2L-229ENST00000488765 FMNL3Q8IVF7 1028 aa18.17■□□□□ 0.5
MCF2L-229ENST00000488765 PARP9Q8IXQ6 854 aa18.17■□□□□ 0.5
MCF2L-229ENST00000488765 JMYQ8N9B5 988 aa18.17■□□□□ 0.5
MCF2L-229ENST00000488765 IFT81Q8WYA0 676 aa18.17■□□□□ 0.5
MCF2L-229ENST00000488765 ZCWPW1Q9H0M4 648 aa18.17■□□□□ 0.5
MCF2L-229ENST00000488765 RIPOR2Q9Y4F9 1068 aa18.17■□□□□ 0.5
MCF2L-229ENST00000488765 A0A1B0GUA9 196 aa18.17■□□□□ 0.5
MCF2L-229ENST00000488765 N4BP3O15049 544 aa18.17■□□□□ 0.5
MCF2L-229ENST00000488765 RNASE9P60153 205 aaKnown RBP18.17■□□□□ 0.5
MCF2L-229ENST00000488765 CYP27A1Q02318 531 aa18.17■□□□□ 0.5
MCF2L-229ENST00000488765 SH3BP1Q9Y3L3 701 aa18.17■□□□□ 0.5
MCF2L-229ENST00000488765 L3MBTL1Q9Y468 752 aa18.17■□□□□ 0.5
MCF2L-229ENST00000488765 FER1L4A9Z1Z3 1794 aa18.17■□□□□ 0.5
MCF2L-229ENST00000488765 ARHGAP23Q9P227 1491 aa18.17■□□□□ 0.5
MCF2L-229ENST00000488765 NAP1L1P55209 391 aaKnown RBP18.17■□□□□ 0.5
MCF2L-229ENST00000488765 TFCP2Q12800 502 aa18.17■□□□□ 0.5
MCF2L-229ENST00000488765 THEMIS2Q5TEJ8 643 aa18.17■□□□□ 0.5
MCF2L-229ENST00000488765 CYB5D1Q6P9G0 228 aa18.17■□□□□ 0.5
MCF2L-229ENST00000488765 ZNF473Q8WTR7 871 aaKnown RBP18.17■□□□□ 0.5
MCF2L-229ENST00000488765 PANX2Q96RD6 677 aa18.17■□□□□ 0.5
MCF2L-229ENST00000488765 CCT8L2Q96SF2 557 aa18.17■□□□□ 0.5
MCF2L-229ENST00000488765 TAB2Q9NYJ8 693 aa18.17■□□□□ 0.5
MCF2L-229ENST00000488765 ZSCAN5CA6NGD5 496 aaPredicted RBP18.16■□□□□ 0.5
MCF2L-229ENST00000488765 FSBPO95073 299 aa18.16■□□□□ 0.5
MCF2L-229ENST00000488765 MYO1EQ12965 1108 aa18.16■□□□□ 0.5
MCF2L-229ENST00000488765 USPL1Q5W0Q7 1092 aa18.16■□□□□ 0.5
MCF2L-229ENST00000488765 MICAL1Q8TDZ2 1067 aa18.16■□□□□ 0.5
MCF2L-229ENST00000488765 DNM1LO00429 736 aa18.16■□□□□ 0.5
MCF2L-229ENST00000488765 CD44P16070 742 aaKnown RBP18.16■□□□□ 0.5
MCF2L-229ENST00000488765 YIPF3Q9GZM5 350 aa18.16■□□□□ 0.5
MCF2L-229ENST00000488765 TTF2Q9UNY4 1162 aaKnown RBP18.16■□□□□ 0.5
MCF2L-229ENST00000488765 ZNF609O15014 1411 aa18.16■□□□□ 0.5
MCF2L-229ENST00000488765 NOC3LQ8WTT2 800 aaKnown RBP18.15■□□□□ 0.5
MCF2L-229ENST00000488765 STAG1Q8WVM7 1258 aa18.15■□□□□ 0.5
MCF2L-229ENST00000488765 CCDC85AQ96PX6 553 aaPredicted RBP18.15■□□□□ 0.5
MCF2L-229ENST00000488765 ALG1Q9BT22 464 aa18.15■□□□□ 0.5
MCF2L-229ENST00000488765 CPSF2Q9P2I0 782 aaKnown RBP18.15■□□□□ 0.5
MCF2L-229ENST00000488765 CHADLQ6NUI6 762 aa18.15■□□□□ 0.5
MCF2L-229ENST00000488765 AMOTL1Q8IY63 956 aa18.15■□□□□ 0.5
MCF2L-229ENST00000488765 TBC1D22AQ8WUA7 517 aa18.15■□□□□ 0.5
MCF2L-229ENST00000488765 XAGE2Q96GT9 111 aa18.15■□□□□ 0.5
MCF2L-229ENST00000488765 DBF4Q9UBU7 674 aaPredicted RBP18.15■□□□□ 0.5
MCF2L-229ENST00000488765 G3BP2Q9UN86 482 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms