RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 ATP2B2Q01814 1243 aa5.58□□□□□ -1.52
CD46-215ENST00000488596 ZNF746Q6NUN9 644 aaPredicted RBP5.58□□□□□ -1.52
CD46-215ENST00000488596 TTC6Q86TZ1 520 aa5.58□□□□□ -1.52
CD46-215ENST00000488596 FBXO15Q8NCQ5 510 aaPredicted RBP5.58□□□□□ -1.52
CD46-215ENST00000488596 NFIBO00712 420 aa5.57□□□□□ -1.52
CD46-215ENST00000488596 P4HBP07237 508 aaKnown RBP5.57□□□□□ -1.52
CD46-215ENST00000488596 ERCC3P19447 782 aa5.57□□□□□ -1.52
CD46-215ENST00000488596 SEPT6Q14141 434 aa5.57□□□□□ -1.52
CD46-215ENST00000488596 AMIGO3Q86WK7 504 aa5.57□□□□□ -1.52
CD46-215ENST00000488596 ABHD4Q8TB40 342 aa5.57□□□□□ -1.52
CD46-215ENST00000488596 DPH2Q9BQC3 489 aaPredicted RBP5.57□□□□□ -1.52
CD46-215ENST00000488596 BCL2L13Q9BXK5 485 aa5.57□□□□□ -1.52
CD46-215ENST00000488596 TJP2Q9UDY2 1190 aa5.57□□□□□ -1.52
CD46-215ENST00000488596 CYP7A1P22680 504 aa5.56□□□□□ -1.52
CD46-215ENST00000488596 KIR3DL1P43629 444 aa5.56□□□□□ -1.52
CD46-215ENST00000488596 HK2P52789 917 aa5.56□□□□□ -1.52
CD46-215ENST00000488596 EAPPQ56P03 285 aaPredicted RBP5.56□□□□□ -1.52
CD46-215ENST00000488596 GIPC2Q8TF65 315 aa5.56□□□□□ -1.52
CD46-215ENST00000488596 CCDC120Q96HB5 630 aa5.56□□□□□ -1.52
CD46-215ENST00000488596 Q96M66 194 aa5.56□□□□□ -1.52
CD46-215ENST00000488596 ADAMTS10Q9H324 1103 aa5.56□□□□□ -1.52
CD46-215ENST00000488596 JAG2Q9Y219 1238 aa5.56□□□□□ -1.52
CD46-215ENST00000488596 NPIPB6E9PJ23 425 aa5.55□□□□□ -1.52
CD46-215ENST00000488596 LDHBP07195 334 aaKnown RBP5.55□□□□□ -1.52
CD46-215ENST00000488596 TMEM253P0C7T8 217 aa5.55□□□□□ -1.52
CD46-215ENST00000488596 RBM25P49756 843 aaKnown RBP5.55□□□□□ -1.52
CD46-215ENST00000488596 RPS26P62854 115 aaKnown RBP5.55□□□□□ -1.52
CD46-215ENST00000488596 CCDC85BQ15834 202 aaPredicted RBP5.55□□□□□ -1.52
CD46-215ENST00000488596 FBXO33Q7Z6M2 555 aa5.55□□□□□ -1.52
CD46-215ENST00000488596 MRPL41Q8IXM3 137 aaKnown RBP5.55□□□□□ -1.52
CD46-215ENST00000488596 MYLIPQ8WY64 445 aa5.55□□□□□ -1.52
CD46-215ENST00000488596 COX4I2Q96KJ9 171 aa5.55□□□□□ -1.52
CD46-215ENST00000488596 DUSP15Q9H1R2 295 aaPredicted RBP5.55□□□□□ -1.52
CD46-215ENST00000488596 DCP1AQ9NPI6 582 aaPredicted RBP5.55□□□□□ -1.52
CD46-215ENST00000488596 RNF19AQ9NV58 838 aa5.55□□□□□ -1.52
CD46-215ENST00000488596 TMEM59LQ9UK28 342 aa5.55□□□□□ -1.52
CD46-215ENST00000488596 ETV2O00321 342 aaPredicted RBP5.54□□□□□ -1.52
CD46-215ENST00000488596 HPXP02790 462 aa5.54□□□□□ -1.52
CD46-215ENST00000488596 PGRP06401 933 aa5.54□□□□□ -1.52
CD46-215ENST00000488596 RAC2P15153 192 aa5.54□□□□□ -1.52
CD46-215ENST00000488596 ZNF16P17020 682 aaPredicted RBP5.54□□□□□ -1.52
CD46-215ENST00000488596 TRHRP34981 398 aaPredicted RBP5.54□□□□□ -1.52
CD46-215ENST00000488596 AGMOQ6ZNB7 445 aa5.54□□□□□ -1.52
CD46-215ENST00000488596 ATG14Q6ZNE5 492 aa5.54□□□□□ -1.52
CD46-215ENST00000488596 TMPRSS7Q7RTY8 843 aa5.54□□□□□ -1.52
CD46-215ENST00000488596 CREG2Q8IUH2 290 aa5.54□□□□□ -1.52
CD46-215ENST00000488596 TMEM87BQ96K49 555 aa5.54□□□□□ -1.52
CD46-215ENST00000488596 EPB41L4BQ9H329 900 aa5.54□□□□□ -1.52
CD46-215ENST00000488596 SP110Q9HB58 689 aa5.54□□□□□ -1.52
CD46-215ENST00000488596 CD320Q9NPF0 282 aa5.54□□□□□ -1.52
CD46-215ENST00000488596 TACC3Q9Y6A5 838 aa5.54□□□□□ -1.52
CD46-215ENST00000488596 RBM47A0AV96 593 aaKnown RBP5.53□□□□□ -1.52
CD46-215ENST00000488596 MED14OSP0DP75 135 aa5.53□□□□□ -1.52
CD46-215ENST00000488596 EIF4BP23588 611 aaKnown RBP5.53□□□□□ -1.52
CD46-215ENST00000488596 TPP2P29144 1249 aaPredicted RBP5.53□□□□□ -1.52
CD46-215ENST00000488596 GNA15P30679 374 aa5.53□□□□□ -1.52
CD46-215ENST00000488596 KCNA10Q16322 511 aa5.53□□□□□ -1.52
CD46-215ENST00000488596 MAP3K11Q16584 847 aa5.53□□□□□ -1.52
CD46-215ENST00000488596 SLC6A19Q695T7 634 aa5.53□□□□□ -1.52
CD46-215ENST00000488596 DNAJB8Q8NHS0 232 aa5.53□□□□□ -1.52
CD46-215ENST00000488596 PIWIL2Q8TC59 973 aaKnown RBP5.53□□□□□ -1.52
CD46-215ENST00000488596 FRMD6Q96NE9 622 aa5.53□□□□□ -1.52
CD46-215ENST00000488596 UNCXA6NJT0 531 aa5.52□□□□□ -1.53
CD46-215ENST00000488596 TFE3P19532 575 aaPredicted RBP5.52□□□□□ -1.53
CD46-215ENST00000488596 LMNB1P20700 586 aa5.52□□□□□ -1.53
CD46-215ENST00000488596 LIG3P49916 1009 aa5.52□□□□□ -1.53
CD46-215ENST00000488596 CTSWP56202 376 aa5.52□□□□□ -1.53
CD46-215ENST00000488596 GAB4Q2WGN9 574 aa5.52□□□□□ -1.53
CD46-215ENST00000488596 NPM2Q86SE8 214 aaKnown RBP5.52□□□□□ -1.53
CD46-215ENST00000488596 MCATQ8IVS2 390 aaKnown RBP5.52□□□□□ -1.53
CD46-215ENST00000488596 PPP1R13LQ8WUF5 828 aa5.52□□□□□ -1.53
CD46-215ENST00000488596 KCNN1Q92952 543 aa5.52□□□□□ -1.53
CD46-215ENST00000488596 ACSF2Q96CM8 615 aaPredicted RBP5.52□□□□□ -1.53
CD46-215ENST00000488596 C19orf44Q9H6X5 657 aa5.52□□□□□ -1.53
CD46-215ENST00000488596 CEP131Q9UPN4 1083 aa5.52□□□□□ -1.53
CD46-215ENST00000488596 SMG5Q9UPR3 1016 aaKnown RBP5.52□□□□□ -1.53
CD46-215ENST00000488596 SRFP11831 508 aa5.51□□□□□ -1.53
CD46-215ENST00000488596 GLDCP23378 1020 aa5.51□□□□□ -1.53
CD46-215ENST00000488596 ZNF326Q5BKZ1 582 aaKnown RBP5.51□□□□□ -1.53
CD46-215ENST00000488596 FAM161BQ96MY7 647 aa5.51□□□□□ -1.53
CD46-215ENST00000488596 DUSP9Q99956 384 aaKnown RBP5.51□□□□□ -1.53
CD46-215ENST00000488596 RNF32Q9H0A6 362 aa5.51□□□□□ -1.53
CD46-215ENST00000488596 MIR1-1HGQ9H1L0 117 aa5.51□□□□□ -1.53
CD46-215ENST00000488596 TLR6Q9Y2C9 796 aa5.51□□□□□ -1.53
CD46-215ENST00000488596 CORINQ9Y5Q5 1042 aa5.51□□□□□ -1.53
CD46-215ENST00000488596 AK5Q9Y6K8 562 aa5.51□□□□□ -1.53
CD46-215ENST00000488596 TCAF2A6NFQ2 919 aa5.5□□□□□ -1.53
CD46-215ENST00000488596 UPK3BL1B0FP48 263 aa5.5□□□□□ -1.53
CD46-215ENST00000488596 UPK3BL2E5RIL1 263 aa5.5□□□□□ -1.53
CD46-215ENST00000488596 INHBBP09529 407 aa5.5□□□□□ -1.53
CD46-215ENST00000488596 ETV3P41162 512 aa5.5□□□□□ -1.53
CD46-215ENST00000488596 RPL6Q02878 288 aaKnown RBP5.5□□□□□ -1.53
CD46-215ENST00000488596 MEI1Q5TIA1 1274 aa5.5□□□□□ -1.53
CD46-215ENST00000488596 JARID2Q92833 1246 aaPredicted RBP5.5□□□□□ -1.53
CD46-215ENST00000488596 GPR62Q9BZJ7 368 aa5.5□□□□□ -1.53
CD46-215ENST00000488596 LRRN2O75325 713 aa5.49□□□□□ -1.53
CD46-215ENST00000488596 PRPF40AO75400 957 aaKnown RBP5.49□□□□□ -1.53
CD46-215ENST00000488596 ZGLP1P0C6A0 271 aa5.49□□□□□ -1.53
CD46-215ENST00000488596 EGR3Q06889 387 aa5.49□□□□□ -1.53
CD46-215ENST00000488596 PDE4BQ07343 736 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms