RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 TDHQ8IZJ6 230 aa23.25■■□□□ 1.31
GGPS1-206ENST00000488594 SERPINB13Q9UIV8 391 aa23.25■■□□□ 1.31
GGPS1-206ENST00000488594 USP14P54578 494 aa23.24■■□□□ 1.31
GGPS1-206ENST00000488594 TTC6Q86TZ1 520 aa23.24■■□□□ 1.31
GGPS1-206ENST00000488594 MAP2K5Q13163 448 aa23.23■■□□□ 1.31
GGPS1-206ENST00000488594 CCL14Q16627 93 aa23.23■■□□□ 1.31
GGPS1-206ENST00000488594 LHX8Q68G74 356 aa23.23■■□□□ 1.31
GGPS1-206ENST00000488594 POTEEQ6S8J3 1075 aa23.23■■□□□ 1.31
GGPS1-206ENST00000488594 KIAA1683Q9H0B3 1180 aa23.23■■□□□ 1.31
GGPS1-206ENST00000488594 CCND3P30281 292 aaPredicted RBP23.22■■□□□ 1.31
GGPS1-206ENST00000488594 MIGA1Q8NAN2 632 aa23.22■■□□□ 1.31
GGPS1-206ENST00000488594 UBE2OQ9C0C9 1292 aaKnown RBP23.22■■□□□ 1.31
GGPS1-206ENST00000488594 TLR7Q9NYK1 1049 aaKnown RBP23.22■■□□□ 1.31
GGPS1-206ENST00000488594 CDK5RAP2Q96SN8 1893 aa23.22■■□□□ 1.31
GGPS1-206ENST00000488594 DLL1O00548 723 aa23.21■■□□□ 1.31
GGPS1-206ENST00000488594 MAP3K12Q12852 859 aa23.21■■□□□ 1.31
GGPS1-206ENST00000488594 ZYXQ15942 572 aaKnown RBP23.21■■□□□ 1.31
GGPS1-206ENST00000488594 CERKLQ49MI3 558 aaPredicted RBP23.21■■□□□ 1.31
GGPS1-206ENST00000488594 MFSD14CQ5VZR4 134 aa23.21■■□□□ 1.31
GGPS1-206ENST00000488594 LBX2Q6XYB7 198 aa23.21■■□□□ 1.31
GGPS1-206ENST00000488594 CATSPERGQ6ZRH7 1159 aa23.21■■□□□ 1.31
GGPS1-206ENST00000488594 FTSJ3Q8IY81 847 aaKnown RBP23.21■■□□□ 1.31
GGPS1-206ENST00000488594 MAGEB6Q8N7X4 407 aa23.21■■□□□ 1.31
GGPS1-206ENST00000488594 EAF2Q96CJ1 260 aaPredicted RBP23.21■■□□□ 1.31
GGPS1-206ENST00000488594 EDC3Q96F86 508 aaKnown RBP23.21■■□□□ 1.31
GGPS1-206ENST00000488594 CCDC8Q9H0W5 538 aaPredicted RBP23.21■■□□□ 1.31
GGPS1-206ENST00000488594 RAB3GAP1Q15042 981 aa23.2■■□□□ 1.3
GGPS1-206ENST00000488594 ABCB5Q2M3G0 1257 aa23.2■■□□□ 1.3
GGPS1-206ENST00000488594 DEFB123Q8N688 67 aa23.2■■□□□ 1.3
GGPS1-206ENST00000488594 C1orf115Q9H7X2 142 aa23.2■■□□□ 1.3
GGPS1-206ENST00000488594 CABP5Q9NP86 173 aa23.2■■□□□ 1.3
GGPS1-206ENST00000488594 SLC15A5A6NIM6 579 aa23.19■■□□□ 1.3
GGPS1-206ENST00000488594 CNMDO75829 334 aa23.19■■□□□ 1.3
GGPS1-206ENST00000488594 VCAM1P19320 739 aa23.19■■□□□ 1.3
GGPS1-206ENST00000488594 IVNS1ABPQ9Y6Y0 642 aa23.19■■□□□ 1.3
GGPS1-206ENST00000488594 MSCO60682 206 aa23.18■■□□□ 1.3
GGPS1-206ENST00000488594 HOXC6P09630 235 aa23.18■■□□□ 1.3
GGPS1-206ENST00000488594 WDR78Q5VTH9 848 aa23.18■■□□□ 1.3
GGPS1-206ENST00000488594 ERC1Q8IUD2 1116 aa23.18■■□□□ 1.3
GGPS1-206ENST00000488594 ITPRIPQ8IWB1 547 aa23.18■■□□□ 1.3
GGPS1-206ENST00000488594 PTPREP23469 700 aa23.17■■□□□ 1.3
GGPS1-206ENST00000488594 LRRC26Q2I0M4 334 aa23.17■■□□□ 1.3
GGPS1-206ENST00000488594 ACER1Q8TDN7 264 aa23.16■■□□□ 1.3
GGPS1-206ENST00000488594 STXBP5LQ9Y2K9 1186 aa23.16■■□□□ 1.3
GGPS1-206ENST00000488594 ATP2B2Q01814 1243 aa23.15■■□□□ 1.3
GGPS1-206ENST00000488594 GRB14Q14449 540 aa23.15■■□□□ 1.3
GGPS1-206ENST00000488594 ANTXR1Q9H6X2 564 aa23.15■■□□□ 1.3
GGPS1-206ENST00000488594 FLRT1Q9NZU1 646 aa23.15■■□□□ 1.3
GGPS1-206ENST00000488594 DDX20Q9UHI6 824 aaKnown RBP23.15■■□□□ 1.3
GGPS1-206ENST00000488594 NDUFB9Q9Y6M9 179 aa23.15■■□□□ 1.3
GGPS1-206ENST00000488594 SHMT1P34896 483 aa23.14■■□□□ 1.3
GGPS1-206ENST00000488594 TTF1Q15361 905 aaPredicted RBP23.14■■□□□ 1.3
GGPS1-206ENST00000488594 LPAR1Q92633 364 aa23.14■■□□□ 1.3
GGPS1-206ENST00000488594 RIOK1Q9BRS2 568 aaKnown RBP23.14■■□□□ 1.3
GGPS1-206ENST00000488594 RPAP3Q9H6T3 665 aaPredicted RBP23.14■■□□□ 1.3
GGPS1-206ENST00000488594 BTBD7Q9P203 1132 aa23.14■■□□□ 1.3
GGPS1-206ENST00000488594 MYO5AQ9Y4I1 1855 aaKnown RBP23.14■■□□□ 1.3
GGPS1-206ENST00000488594 MYH1P12882 1939 aa23.14■■□□□ 1.29
GGPS1-206ENST00000488594 SPDYE16A6NNV3 312 aaPredicted RBP23.14■■□□□ 1.29
GGPS1-206ENST00000488594 POLR3DP05423 398 aaPredicted RBP23.14■■□□□ 1.29
GGPS1-206ENST00000488594 PLCD1P51178 756 aa23.14■■□□□ 1.29
GGPS1-206ENST00000488594 Q7L0L9 218 aa23.14■■□□□ 1.29
GGPS1-206ENST00000488594 AACSQ86V21 672 aa23.14■■□□□ 1.29
GGPS1-206ENST00000488594 MTMR10Q9NXD2 777 aa23.14■■□□□ 1.29
GGPS1-206ENST00000488594 COL6A3P12111 3177 aa23.13■■□□□ 1.29
GGPS1-206ENST00000488594 MAGEB6P1A0A0J9YX57 407 aa23.13■■□□□ 1.29
GGPS1-206ENST00000488594 DNM1LO00429 736 aa23.13■■□□□ 1.29
GGPS1-206ENST00000488594 CNGA1P29973 690 aa23.13■■□□□ 1.29
GGPS1-206ENST00000488594 CEP85Q6P2H3 762 aa23.13■■□□□ 1.29
GGPS1-206ENST00000488594 LBHD1Q9BQE6 289 aaPredicted RBP23.13■■□□□ 1.29
GGPS1-206ENST00000488594 SENP6Q9GZR1 1112 aaPredicted RBP23.13■■□□□ 1.29
GGPS1-206ENST00000488594 HOXC10Q9NYD6 342 aa23.13■■□□□ 1.29
GGPS1-206ENST00000488594 GUCY1A2P33402 732 aa23.12■■□□□ 1.29
GGPS1-206ENST00000488594 MDM2Q00987 491 aaPredicted RBP23.12■■□□□ 1.29
GGPS1-206ENST00000488594 GABPAQ06546 454 aa23.12■■□□□ 1.29
GGPS1-206ENST00000488594 HSP90AB4PQ58FF6 505 aa23.12■■□□□ 1.29
GGPS1-206ENST00000488594 CRNKL1Q9BZJ0 848 aaKnown RBP23.12■■□□□ 1.29
GGPS1-206ENST00000488594 STRNO43815 780 aa23.11■■□□□ 1.29
GGPS1-206ENST00000488594 RLBP1P12271 317 aa23.11■■□□□ 1.29
GGPS1-206ENST00000488594 COG2Q14746 738 aa23.11■■□□□ 1.29
GGPS1-206ENST00000488594 SEPT2Q15019 361 aa23.11■■□□□ 1.29
GGPS1-206ENST00000488594 IGHA2P01877 340 aa23.1■■□□□ 1.29
GGPS1-206ENST00000488594 CYP2C19P33261 490 aa23.1■■□□□ 1.29
GGPS1-206ENST00000488594 SLC9C2Q5TAH2 1124 aa23.1■■□□□ 1.29
GGPS1-206ENST00000488594 OLFML2BQ68BL8 750 aa23.1■■□□□ 1.29
GGPS1-206ENST00000488594 DPP9Q86TI2 863 aa23.1■■□□□ 1.29
GGPS1-206ENST00000488594 NPLOC4Q8TAT6 608 aa23.1■■□□□ 1.29
GGPS1-206ENST00000488594 MCM9Q9NXL9 1143 aa23.1■■□□□ 1.29
GGPS1-206ENST00000488594 EXOC6BQ9Y2D4 811 aa23.1■■□□□ 1.29
GGPS1-206ENST00000488594 ARRDC4Q8NCT1 418 aa23.09■■□□□ 1.29
GGPS1-206ENST00000488594 SHCBP1Q8NEM2 672 aa23.09■■□□□ 1.29
GGPS1-206ENST00000488594 PRKAG2Q9UGJ0 569 aa23.09■■□□□ 1.29
GGPS1-206ENST00000488594 MPHOSPH10O00566 681 aaKnown RBP23.08■■□□□ 1.29
GGPS1-206ENST00000488594 CYBAP13498 195 aa23.08■■□□□ 1.29
GGPS1-206ENST00000488594 PDE6AP16499 860 aa23.08■■□□□ 1.29
GGPS1-206ENST00000488594 FAM109BQ6ICB4 259 aaPredicted RBP23.08■■□□□ 1.29
GGPS1-206ENST00000488594 MB21D1Q8N884 522 aa23.08■■□□□ 1.29
GGPS1-206ENST00000488594 MOV10L1Q9BXT6 1211 aaKnown RBP23.08■■□□□ 1.29
GGPS1-206ENST00000488594 TANGO6Q9C0B7 1094 aa23.08■■□□□ 1.29
GGPS1-206ENST00000488594 SLC5A4Q9NY91 659 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms