RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 DALRD3Q5D0E6 543 aaKnown RBP23.45■■□□□ 1.35
NECAB3-213ENST00000488489 NAP1L5Q96NT1 182 aaPredicted RBP23.45■■□□□ 1.35
NECAB3-213ENST00000488489 RBM28Q9NW13 759 aaKnown RBP23.45■■□□□ 1.35
NECAB3-213ENST00000488489 CFAP45Q9UL16 551 aa23.45■■□□□ 1.35
NECAB3-213ENST00000488489 BRCA1P38398 1863 aaKnown RBP23.45■■□□□ 1.34
NECAB3-213ENST00000488489 NEDD1Q8NHV4 660 aa23.45■■□□□ 1.34
NECAB3-213ENST00000488489 KAT14Q9H8E8 782 aa23.45■■□□□ 1.34
NECAB3-213ENST00000488489 PSMD14O00487 310 aa23.44■■□□□ 1.34
NECAB3-213ENST00000488489 DEXIO95424 95 aa23.44■■□□□ 1.34
NECAB3-213ENST00000488489 SOGA3Q5TF21 947 aa23.44■■□□□ 1.34
NECAB3-213ENST00000488489 TMTC3Q6ZXV5 915 aa23.44■■□□□ 1.34
NECAB3-213ENST00000488489 PNMA1Q8ND90 353 aa23.44■■□□□ 1.34
NECAB3-213ENST00000488489 RNF26Q9BY78 433 aaPredicted RBP23.44■■□□□ 1.34
NECAB3-213ENST00000488489 SRBD1Q8N5C6 995 aaKnown RBP23.44■■□□□ 1.34
NECAB3-213ENST00000488489 WASF1Q92558 559 aa23.44■■□□□ 1.34
NECAB3-213ENST00000488489 FAM198AQ9UFP1 575 aa23.44■■□□□ 1.34
NECAB3-213ENST00000488489 STX8Q9UNK0 236 aa23.44■■□□□ 1.34
NECAB3-213ENST00000488489 MYH6P13533 1939 aa23.43■■□□□ 1.34
NECAB3-213ENST00000488489 SRCAPQ6ZRS2 3230 aa23.43■■□□□ 1.34
NECAB3-213ENST00000488489 hCG_1642624A0A1W2PR95 340 aa23.43■■□□□ 1.34
NECAB3-213ENST00000488489 VIL1P09327 827 aaKnown RBP23.43■■□□□ 1.34
NECAB3-213ENST00000488489 SLURP2P0DP57 97 aa23.43■■□□□ 1.34
NECAB3-213ENST00000488489 PKN1Q16512 942 aa23.43■■□□□ 1.34
NECAB3-213ENST00000488489 RSBN1LQ6PCB5 846 aaPredicted RBP23.43■■□□□ 1.34
NECAB3-213ENST00000488489 CTCFLQ8NI51 663 aaPredicted RBP23.43■■□□□ 1.34
NECAB3-213ENST00000488489 PGBD1Q96JS3 809 aa23.43■■□□□ 1.34
NECAB3-213ENST00000488489 TMEM47Q9BQJ4 181 aa23.43■■□□□ 1.34
NECAB3-213ENST00000488489 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.43■■□□□ 1.34
NECAB3-213ENST00000488489 SERPINB13Q9UIV8 391 aa23.43■■□□□ 1.34
NECAB3-213ENST00000488489 TCP10Q12799 353 aa23.42■■□□□ 1.34
NECAB3-213ENST00000488489 CFAP100Q494V2 611 aa23.42■■□□□ 1.34
NECAB3-213ENST00000488489 CCDC178Q5BJE1 867 aa23.42■■□□□ 1.34
NECAB3-213ENST00000488489 BRAPQ7Z569 592 aa23.42■■□□□ 1.34
NECAB3-213ENST00000488489 KLHL34Q8N239 644 aa23.42■■□□□ 1.34
NECAB3-213ENST00000488489 SHISA4Q96DD7 197 aa23.42■■□□□ 1.34
NECAB3-213ENST00000488489 PRMT6Q96LA8 375 aaPredicted RBP23.42■■□□□ 1.34
NECAB3-213ENST00000488489 GMLQ99445 158 aa23.42■■□□□ 1.34
NECAB3-213ENST00000488489 IDI2Q9BXS1 227 aa23.42■■□□□ 1.34
NECAB3-213ENST00000488489 VPS33BQ9H267 617 aa23.42■■□□□ 1.34
NECAB3-213ENST00000488489 RCOR1Q9UKL0 485 aa23.42■■□□□ 1.34
NECAB3-213ENST00000488489 V9GY48 417 aaPredicted RBP23.42■■□□□ 1.34
NECAB3-213ENST00000488489 PTGER2P43116 358 aa23.42■■□□□ 1.34
NECAB3-213ENST00000488489 MYSM1Q5VVJ2 828 aa23.42■■□□□ 1.34
NECAB3-213ENST00000488489 ATL3Q6DD88 541 aa23.42■■□□□ 1.34
NECAB3-213ENST00000488489 ZNF396Q96N95 335 aaPredicted RBP23.42■■□□□ 1.34
NECAB3-213ENST00000488489 KCNJ14Q9UNX9 436 aa23.42■■□□□ 1.34
NECAB3-213ENST00000488489 PRPF3O43395 683 aaKnown RBP23.41■■□□□ 1.34
NECAB3-213ENST00000488489 TRIM29Q14134 588 aa23.41■■□□□ 1.34
NECAB3-213ENST00000488489 ANP32BQ92688 251 aaKnown RBP23.41■■□□□ 1.34
NECAB3-213ENST00000488489 CEP95Q96GE4 821 aa23.41■■□□□ 1.34
NECAB3-213ENST00000488489 TDRD3Q9H7E2 651 aaKnown RBP23.41■■□□□ 1.34
NECAB3-213ENST00000488489 ZBTB12Q9Y330 459 aaPredicted RBP23.41■■□□□ 1.34
NECAB3-213ENST00000488489 ZNRF3Q9ULT6 936 aa23.41■■□□□ 1.34
NECAB3-213ENST00000488489 CNTNAP5Q8WYK1 1306 aa23.4■■□□□ 1.34
NECAB3-213ENST00000488489 SYCE3A1L190 88 aa23.4■■□□□ 1.34
NECAB3-213ENST00000488489 U2AF2P26368 475 aaKnown RBP eCLIP23.4■■□□□ 1.345e-10■□□□□ 11.1
NECAB3-213ENST00000488489 SHMT1P34896 483 aa23.4■■□□□ 1.34
NECAB3-213ENST00000488489 SH3BP5LQ7L8J4 393 aa23.4■■□□□ 1.34
NECAB3-213ENST00000488489 STAG2Q8N3U4 1231 aa23.4■■□□□ 1.34
NECAB3-213ENST00000488489 FER1L6Q2WGJ9 1857 aa23.4■■□□□ 1.34
NECAB3-213ENST00000488489 DDTLA6NHG4 134 aaPredicted RBP23.39■■□□□ 1.34
NECAB3-213ENST00000488489 MMP1P03956 469 aa23.39■■□□□ 1.34
NECAB3-213ENST00000488489 AKR1B1P15121 316 aa23.39■■□□□ 1.34
NECAB3-213ENST00000488489 NOVP48745 357 aa23.39■■□□□ 1.34
NECAB3-213ENST00000488489 CD2APQ9Y5K6 639 aa23.39■■□□□ 1.34
NECAB3-213ENST00000488489 MYO3BQ8WXR4 1341 aa23.39■■□□□ 1.33
NECAB3-213ENST00000488489 NIM1KQ8IY84 436 aa23.39■■□□□ 1.33
NECAB3-213ENST00000488489 MAP3K14Q99558 947 aa23.39■■□□□ 1.33
NECAB3-213ENST00000488489 CLIC4Q9Y696 253 aa23.39■■□□□ 1.33
NECAB3-213ENST00000488489 MYH8P13535 1937 aa23.38■■□□□ 1.33
NECAB3-213ENST00000488489 NFKBIEO00221 500 aa23.38■■□□□ 1.33
NECAB3-213ENST00000488489 HLA-DOAP06340 250 aa23.38■■□□□ 1.33
NECAB3-213ENST00000488489 LIG1P18858 919 aa23.38■■□□□ 1.33
NECAB3-213ENST00000488489 AKAP17AQ02040 695 aaKnown RBP23.38■■□□□ 1.33
NECAB3-213ENST00000488489 RASGRP2Q7LDG7 609 aa23.38■■□□□ 1.33
NECAB3-213ENST00000488489 TAOK3Q9H2K8 898 aa23.38■■□□□ 1.33
NECAB3-213ENST00000488489 DNAJC18Q9H819 358 aa23.38■■□□□ 1.33
NECAB3-213ENST00000488489 RTEL1Q9NZ71 1219 aa23.38■■□□□ 1.33
NECAB3-213ENST00000488489 SWAP70Q9UH65 585 aa23.38■■□□□ 1.33
NECAB3-213ENST00000488489 MAD2L2Q9UI95 211 aa23.38■■□□□ 1.33
NECAB3-213ENST00000488489 SIPA1L1O43166 1804 aa23.38■■□□□ 1.33
NECAB3-213ENST00000488489 BTBD18B2RXH4 712 aa23.38■■□□□ 1.33
NECAB3-213ENST00000488489 KIF5BP33176 963 aa23.38■■□□□ 1.33
NECAB3-213ENST00000488489 GRM4Q14833 912 aa23.38■■□□□ 1.33
NECAB3-213ENST00000488489 SYAP1Q96A49 352 aaPredicted RBP23.38■■□□□ 1.33
NECAB3-213ENST00000488489 MTMR7Q9Y216 660 aa23.38■■□□□ 1.33
NECAB3-213ENST00000488489 PLIN4Q96Q06 1357 aa23.37■■□□□ 1.33
NECAB3-213ENST00000488489 NPM3O75607 178 aaKnown RBP23.37■■□□□ 1.33
NECAB3-213ENST00000488489 CXCL9Q07325 125 aa23.37■■□□□ 1.33
NECAB3-213ENST00000488489 EHD4Q9H223 541 aa23.37■■□□□ 1.33
NECAB3-213ENST00000488489 VPS54Q9P1Q0 977 aa23.37■■□□□ 1.33
NECAB3-213ENST00000488489 BCS1LQ9Y276 419 aa23.37■■□□□ 1.33
NECAB3-213ENST00000488489 GOLGA6L4A6NEF3 574 aa23.36■■□□□ 1.33
NECAB3-213ENST00000488489 VEGFAP15692 232 aaPredicted RBP23.36■■□□□ 1.33
NECAB3-213ENST00000488489 DIS3L2Q8IYB7 885 aaKnown RBP23.36■■□□□ 1.33
NECAB3-213ENST00000488489 DHX36Q9H2U1 1008 aaKnown RBP23.36■■□□□ 1.33
NECAB3-213ENST00000488489 MTMR4Q9NYA4 1195 aa23.36■■□□□ 1.33
NECAB3-213ENST00000488489 IGKV6D-41A0A0C4DH26 115 aa23.36■■□□□ 1.33
NECAB3-213ENST00000488489 SPDYE2BA6NHP3 402 aa23.36■■□□□ 1.33
NECAB3-213ENST00000488489 FAM196BA6NMK8 535 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms