RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 PRAMEF22A3QJZ6 481 aa8.42□□□□□ -1.06
TNFSF4-203ENST00000488053 NPHP1O15259 732 aa8.42□□□□□ -1.06
TNFSF4-203ENST00000488053 PSAPP07602 524 aa8.42□□□□□ -1.06
TNFSF4-203ENST00000488053 LMNB1P20700 586 aa8.42□□□□□ -1.06
TNFSF4-203ENST00000488053 ALAS2P22557 587 aa8.42□□□□□ -1.06
TNFSF4-203ENST00000488053 SOX18P35713 384 aa8.42□□□□□ -1.06
TNFSF4-203ENST00000488053 ADH7P40394 386 aa8.42□□□□□ -1.06
TNFSF4-203ENST00000488053 DHX32Q7L7V1 743 aaKnown RBP8.42□□□□□ -1.06
TNFSF4-203ENST00000488053 GALNT6Q8NCL4 622 aa8.42□□□□□ -1.06
TNFSF4-203ENST00000488053 WHAMMQ8TF30 809 aa8.42□□□□□ -1.06
TNFSF4-203ENST00000488053 EDARADDQ8WWZ3 215 aa8.42□□□□□ -1.06
TNFSF4-203ENST00000488053 FMNL2Q96PY5 1086 aa8.42□□□□□ -1.06
TNFSF4-203ENST00000488053 RBCK1Q9BYM8 510 aa8.42□□□□□ -1.06
TNFSF4-203ENST00000488053 UBE2OQ9C0C9 1292 aaKnown RBP8.42□□□□□ -1.06
TNFSF4-203ENST00000488053 ABI2Q9NYB9 513 aaPredicted RBP8.42□□□□□ -1.06
TNFSF4-203ENST00000488053 SLX4Q8IY92 1834 aa8.41□□□□□ -1.06
TNFSF4-203ENST00000488053 BCORQ6W2J9 1755 aa8.41□□□□□ -1.06
TNFSF4-203ENST00000488053 NPC1L1Q9UHC9 1359 aa8.41□□□□□ -1.06
TNFSF4-203ENST00000488053 NFKBIEO00221 500 aa8.41□□□□□ -1.06
TNFSF4-203ENST00000488053 MMP20O60882 483 aa8.41□□□□□ -1.06
TNFSF4-203ENST00000488053 HOXD8P13378 290 aaPredicted RBP8.41□□□□□ -1.06
TNFSF4-203ENST00000488053 MAPK1P28482 360 aa8.41□□□□□ -1.06
TNFSF4-203ENST00000488053 IL6STP40189 918 aaPredicted RBP8.41□□□□□ -1.06
TNFSF4-203ENST00000488053 PLAURQ03405 335 aa8.41□□□□□ -1.06
TNFSF4-203ENST00000488053 TBC1D8BQ0IIM8 1120 aa8.41□□□□□ -1.06
TNFSF4-203ENST00000488053 DCTN1Q14203 1278 aa8.41□□□□□ -1.06
TNFSF4-203ENST00000488053 PRR5LQ6MZQ0 368 aa8.41□□□□□ -1.06
TNFSF4-203ENST00000488053 MCM10Q7L590 875 aa8.41□□□□□ -1.06
TNFSF4-203ENST00000488053 NPM2Q86SE8 214 aaKnown RBP8.41□□□□□ -1.06
TNFSF4-203ENST00000488053 CFAP53Q96M91 514 aa8.41□□□□□ -1.06
TNFSF4-203ENST00000488053 FAM129BQ96TA1 746 aa8.41□□□□□ -1.06
TNFSF4-203ENST00000488053 MDFIQ99750 246 aa8.41□□□□□ -1.06
TNFSF4-203ENST00000488053 IGFLR1Q9H665 355 aa8.41□□□□□ -1.06
TNFSF4-203ENST00000488053 DNAJB12Q9NXW2 375 aaKnown RBP8.41□□□□□ -1.06
TNFSF4-203ENST00000488053 DICER1Q9UPY3 1922 aaKnown RBP8.41□□□□□ -1.06
TNFSF4-203ENST00000488053 FER1L6Q2WGJ9 1857 aa8.4□□□□□ -1.06
TNFSF4-203ENST00000488053 CEMIPQ8WUJ3 1361 aa8.4□□□□□ -1.06
TNFSF4-203ENST00000488053 CAMTA2O94983 1202 aa8.4□□□□□ -1.06
TNFSF4-203ENST00000488053 U2AF1L5P0DN76 240 aaPredicted RBP8.4□□□□□ -1.06
TNFSF4-203ENST00000488053 NRLP54845 237 aa8.4□□□□□ -1.06
TNFSF4-203ENST00000488053 MARSP56192 900 aaKnown RBP8.4□□□□□ -1.06
TNFSF4-203ENST00000488053 GPLD1P80108 840 aa8.4□□□□□ -1.06
TNFSF4-203ENST00000488053 U2AF1Q01081 240 aaKnown RBP eCLIP8.4□□□□□ -1.06
TNFSF4-203ENST00000488053 FSTL1Q12841 308 aa8.4□□□□□ -1.06
TNFSF4-203ENST00000488053 CNBD1Q8NA66 436 aa8.4□□□□□ -1.06
TNFSF4-203ENST00000488053 SMC1BQ8NDV3 1235 aa8.4□□□□□ -1.06
TNFSF4-203ENST00000488053 OR13H1Q8NG92 308 aa8.4□□□□□ -1.06
TNFSF4-203ENST00000488053 TRPM4Q8TD43 1214 aa8.4□□□□□ -1.06
TNFSF4-203ENST00000488053 SNX29Q8TEQ0 813 aa8.4□□□□□ -1.06
TNFSF4-203ENST00000488053 DMRTB1Q96MA1 342 aa8.4□□□□□ -1.06
TNFSF4-203ENST00000488053 SETDB2Q96T68 719 aa8.4□□□□□ -1.06
TNFSF4-203ENST00000488053 TEX13AQ9BXU3 409 aaPredicted RBP8.4□□□□□ -1.06
TNFSF4-203ENST00000488053 TMEM63CQ9P1W3 806 aa8.4□□□□□ -1.06
TNFSF4-203ENST00000488053 USP16Q9Y5T5 823 aa8.4□□□□□ -1.06
TNFSF4-203ENST00000488053 GLTPD2A6NH11 291 aa8.39□□□□□ -1.07
TNFSF4-203ENST00000488053 A6NHS1 94 aa8.39□□□□□ -1.07
TNFSF4-203ENST00000488053 FAM177BA6PVY3 158 aa8.39□□□□□ -1.07
TNFSF4-203ENST00000488053 NEFLP07196 543 aa8.39□□□□□ -1.07
TNFSF4-203ENST00000488053 VEGFAP15692 232 aaPredicted RBP8.39□□□□□ -1.07
TNFSF4-203ENST00000488053 LORP23490 312 aaPredicted RBP8.39□□□□□ -1.07
TNFSF4-203ENST00000488053 PPP2R1AP30153 589 aa8.39□□□□□ -1.07
TNFSF4-203ENST00000488053 PDE6BP35913 854 aa8.39□□□□□ -1.07
TNFSF4-203ENST00000488053 C1orf229Q6ZS94 237 aaPredicted RBP8.39□□□□□ -1.07
TNFSF4-203ENST00000488053 ZSCAN29Q8IWY8 852 aaPredicted RBP8.39□□□□□ -1.07
TNFSF4-203ENST00000488053 RTF1Q92541 710 aaKnown RBP8.39□□□□□ -1.07
TNFSF4-203ENST00000488053 BRIP1Q9BX63 1249 aa8.39□□□□□ -1.07
TNFSF4-203ENST00000488053 MIS18AQ9NYP9 233 aa8.39□□□□□ -1.07
TNFSF4-203ENST00000488053 SLC6A14Q9UN76 642 aa8.39□□□□□ -1.07
TNFSF4-203ENST00000488053 NUDCQ9Y266 331 aa8.39□□□□□ -1.07
TNFSF4-203ENST00000488053 DLG5Q8TDM6 1919 aa8.39□□□□□ -1.07
TNFSF4-203ENST00000488053 PHF20L1A8MW92 1017 aa8.38□□□□□ -1.07
TNFSF4-203ENST00000488053 TNFRSF21O75509 655 aa8.38□□□□□ -1.07
TNFSF4-203ENST00000488053 AMPD1P23109 780 aa8.38□□□□□ -1.07
TNFSF4-203ENST00000488053 ST5P78524 1137 aa8.38□□□□□ -1.07
TNFSF4-203ENST00000488053 KANK3Q6NY19 840 aa8.38□□□□□ -1.07
TNFSF4-203ENST00000488053 NBPF5PQ86XG9 351 aaPredicted RBP8.38□□□□□ -1.07
TNFSF4-203ENST00000488053 NEDD1Q8NHV4 660 aa8.38□□□□□ -1.07
TNFSF4-203ENST00000488053 PMEPA1Q969W9 287 aa8.38□□□□□ -1.07
TNFSF4-203ENST00000488053 PCNTO95613 3336 aa8.38□□□□□ -1.07
TNFSF4-203ENST00000488053 ARFGEF2Q9Y6D5 1785 aa8.38□□□□□ -1.07
TNFSF4-203ENST00000488053 FAM181BA6NEQ2 426 aa8.37□□□□□ -1.07
TNFSF4-203ENST00000488053 SHISA8B8ZZ34 492 aa8.37□□□□□ -1.07
TNFSF4-203ENST00000488053 PHACTR2O75167 634 aa8.37□□□□□ -1.07
TNFSF4-203ENST00000488053 ARHGEF15O94989 841 aa8.37□□□□□ -1.07
TNFSF4-203ENST00000488053 SNRPA1P09661 255 aaKnown RBP8.37□□□□□ -1.07
TNFSF4-203ENST00000488053 PRPF40BQ6NWY9 871 aaKnown RBP8.37□□□□□ -1.07
TNFSF4-203ENST00000488053 BTBD6Q96KE9 485 aa8.37□□□□□ -1.07
TNFSF4-203ENST00000488053 TAOK3Q9H2K8 898 aa8.37□□□□□ -1.07
TNFSF4-203ENST00000488053 SRGNP10124 158 aa8.36□□□□□ -1.07
TNFSF4-203ENST00000488053 CES1P23141 567 aa8.36□□□□□ -1.07
TNFSF4-203ENST00000488053 HYAL2Q12891 473 aa8.36□□□□□ -1.07
TNFSF4-203ENST00000488053 OLFM4Q6UX06 510 aa8.36□□□□□ -1.07
TNFSF4-203ENST00000488053 CHSY3Q70JA7 882 aa8.36□□□□□ -1.07
TNFSF4-203ENST00000488053 TMC7Q7Z402 723 aa8.36□□□□□ -1.07
TNFSF4-203ENST00000488053 FAM35AQ86V20 835 aa8.36□□□□□ -1.07
TNFSF4-203ENST00000488053 NGEFQ8N5V2 710 aa8.36□□□□□ -1.07
TNFSF4-203ENST00000488053 ALKBH8Q96BT7 664 aaKnown RBP8.36□□□□□ -1.07
TNFSF4-203ENST00000488053 MASTLQ96GX5 879 aa8.36□□□□□ -1.07
TNFSF4-203ENST00000488053 ASB16Q96NS5 453 aa8.36□□□□□ -1.07
TNFSF4-203ENST00000488053 NIP7Q9Y221 180 aaKnown RBP eCLIP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms