RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 FGD1P98174 961 aa7.76□□□□□ -1.17
BRCA1-217ENST00000487825 RING1Q06587 406 aa7.76□□□□□ -1.17
BRCA1-217ENST00000487825 DNAJC14Q6Y2X3 702 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-217ENST00000487825 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-217ENST00000487825 PLD6Q8N2A8 252 aaKnown RBP7.76□□□□□ -1.17
BRCA1-217ENST00000487825 U3KQE9 123 aa7.76□□□□□ -1.17
BRCA1-217ENST00000487825 DEPDC5O75140 1603 aa7.75□□□□□ -1.17
BRCA1-217ENST00000487825 PRAMEF27A3QJZ7 478 aa7.75□□□□□ -1.17
BRCA1-217ENST00000487825 ZBTB37Q5TC79 503 aa7.75□□□□□ -1.17
BRCA1-217ENST00000487825 MEI1Q5TIA1 1274 aa7.75□□□□□ -1.17
BRCA1-217ENST00000487825 SCARA3Q6AZY7 606 aa7.75□□□□□ -1.17
BRCA1-217ENST00000487825 LRFN4Q6PJG9 635 aa7.75□□□□□ -1.17
BRCA1-217ENST00000487825 ARHGAP27Q6ZUM4 889 aa7.75□□□□□ -1.17
BRCA1-217ENST00000487825 CDC37L1Q7L3B6 337 aa7.75□□□□□ -1.17
BRCA1-217ENST00000487825 FBXL18Q96ME1 805 aa7.75□□□□□ -1.17
BRCA1-217ENST00000487825 FAM161BQ96MY7 647 aa7.75□□□□□ -1.17
BRCA1-217ENST00000487825 GZF1Q9H116 711 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-217ENST00000487825 IQGAP1P46940 1657 aa7.75□□□□□ -1.17
BRCA1-217ENST00000487825 A2ML1A8K2U0 1454 aa7.75□□□□□ -1.17
BRCA1-217ENST00000487825 PRXQ9BXM0 1461 aa7.75□□□□□ -1.17
BRCA1-217ENST00000487825 ZMYM3Q14202 1370 aa7.74□□□□□ -1.17
BRCA1-217ENST00000487825 FANCGO15287 622 aa7.74□□□□□ -1.17
BRCA1-217ENST00000487825 CDK8P49336 464 aa7.74□□□□□ -1.17
BRCA1-217ENST00000487825 BNIP3Q12983 259 aa7.74□□□□□ -1.17
BRCA1-217ENST00000487825 PSMD2Q13200 908 aa7.74□□□□□ -1.17
BRCA1-217ENST00000487825 BCL7CQ8WUZ0 217 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-217ENST00000487825 PLPPR2Q96GM1 343 aa7.74□□□□□ -1.17
BRCA1-217ENST00000487825 ADGRE2Q9UHX3 823 aa7.74□□□□□ -1.17
BRCA1-217ENST00000487825 SLC5A6Q9Y289 635 aa7.74□□□□□ -1.17
BRCA1-217ENST00000487825 KIF14Q15058 1648 aa7.74□□□□□ -1.17
BRCA1-217ENST00000487825 ABCC1P33527 1531 aa7.73□□□□□ -1.17
BRCA1-217ENST00000487825 LRRC7Q96NW7 1537 aa7.73□□□□□ -1.17
BRCA1-217ENST00000487825 LMNB1P20700 586 aa7.73□□□□□ -1.17
BRCA1-217ENST00000487825 XPCQ01831 940 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-217ENST00000487825 SEPT6Q14141 434 aa7.73□□□□□ -1.17
BRCA1-217ENST00000487825 ZNF574Q6ZN55 896 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-217ENST00000487825 HDXQ7Z353 690 aa7.73□□□□□ -1.17
BRCA1-217ENST00000487825 NETO1Q8TDF5 533 aa7.73□□□□□ -1.17
BRCA1-217ENST00000487825 GAL3ST3Q96A11 431 aa7.73□□□□□ -1.17
BRCA1-217ENST00000487825 PAK6Q9NQU5 681 aaPredicted RBP7.73□□□□□ -1.17
BRCA1-217ENST00000487825 PRDM10Q9NQV6 1147 aa7.73□□□□□ -1.17
BRCA1-217ENST00000487825 PCDHB5Q9Y5E4 795 aa7.73□□□□□ -1.17
BRCA1-217ENST00000487825 ARHGAP5Q13017 1502 aa7.73□□□□□ -1.17
BRCA1-217ENST00000487825 ITIH2P19823 946 aa7.72□□□□□ -1.17
BRCA1-217ENST00000487825 DAB2P98082 770 aa7.72□□□□□ -1.17
BRCA1-217ENST00000487825 TAGLNQ01995 201 aaKnown RBP7.72□□□□□ -1.17
BRCA1-217ENST00000487825 WIPI1Q5MNZ9 446 aaPredicted RBP7.72□□□□□ -1.17
BRCA1-217ENST00000487825 SPRED2Q7Z698 418 aa7.72□□□□□ -1.17
BRCA1-217ENST00000487825 CDK13Q14004 1512 aaKnown RBP7.72□□□□□ -1.17
BRCA1-217ENST00000487825 PLXNC1O60486 1568 aa7.71□□□□□ -1.17
BRCA1-217ENST00000487825 PREX2Q70Z35 1606 aa7.71□□□□□ -1.17
BRCA1-217ENST00000487825 ZC3H13Q5T200 1668 aaKnown RBP7.71□□□□□ -1.18
BRCA1-217ENST00000487825 MED14O60244 1454 aa7.71□□□□□ -1.18
BRCA1-217ENST00000487825 OXCT1P55809 520 aa7.71□□□□□ -1.18
BRCA1-217ENST00000487825 CYFIP1Q7L576 1253 aa7.71□□□□□ -1.18
BRCA1-217ENST00000487825 AFAP1Q8N556 730 aa7.71□□□□□ -1.18
BRCA1-217ENST00000487825 HEXIM2Q96MH2 286 aaKnown RBP7.71□□□□□ -1.18
BRCA1-217ENST00000487825 FBRSQ9HAH7 460 aa7.71□□□□□ -1.18
BRCA1-217ENST00000487825 CD96P40200 585 aa7.7□□□□□ -1.18
BRCA1-217ENST00000487825 LIG3P49916 1009 aa7.7□□□□□ -1.18
BRCA1-217ENST00000487825 ETF1P62495 437 aaKnown RBP7.7□□□□□ -1.18
BRCA1-217ENST00000487825 RPS26P62854 115 aaKnown RBP7.7□□□□□ -1.18
BRCA1-217ENST00000487825 CCDC27Q2M243 656 aa7.7□□□□□ -1.18
BRCA1-217ENST00000487825 EFCAB2Q5VUJ9 269 aa7.7□□□□□ -1.18
BRCA1-217ENST00000487825 ARMCX6Q7L4S7 300 aa7.7□□□□□ -1.18
BRCA1-217ENST00000487825 FBXO33Q7Z6M2 555 aa7.7□□□□□ -1.18
BRCA1-217ENST00000487825 STK11IPQ8N1F8 1099 aa7.7□□□□□ -1.18
BRCA1-217ENST00000487825 KCT2Q8NC54 265 aa7.7□□□□□ -1.18
BRCA1-217ENST00000487825 AGBL5Q8NDL9 886 aa7.7□□□□□ -1.18
BRCA1-217ENST00000487825 ZNF507Q8TCN5 953 aa7.7□□□□□ -1.18
BRCA1-217ENST00000487825 PLAGL2Q9UPG8 496 aa7.7□□□□□ -1.18
BRCA1-217ENST00000487825 ROBO1Q9Y6N7 1651 aa7.7□□□□□ -1.18
BRCA1-217ENST00000487825 PAX4O43316 350 aa7.69□□□□□ -1.18
BRCA1-217ENST00000487825 CEACAM5P06731 702 aa7.69□□□□□ -1.18
BRCA1-217ENST00000487825 CTSHP09668 335 aa7.69□□□□□ -1.18
BRCA1-217ENST00000487825 TAF1CQ15572 869 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-217ENST00000487825 NKG7Q16617 165 aa7.69□□□□□ -1.18
BRCA1-217ENST00000487825 IFI16Q16666 785 aaKnown RBP7.69□□□□□ -1.18
BRCA1-217ENST00000487825 AGMOQ6ZNB7 445 aa7.69□□□□□ -1.18
BRCA1-217ENST00000487825 FAM214BQ7L5A3 538 aa7.69□□□□□ -1.18
BRCA1-217ENST00000487825 TMC4Q7Z404 712 aa7.69□□□□□ -1.18
BRCA1-217ENST00000487825 GTF2IRD1Q9UHL9 959 aa7.69□□□□□ -1.18
BRCA1-217ENST00000487825 TLR6Q9Y2C9 796 aa7.69□□□□□ -1.18
BRCA1-217ENST00000487825 SNCAIPQ9Y6H5 919 aa7.69□□□□□ -1.18
BRCA1-217ENST00000487825 PLCL1Q15111 1095 aa7.68□□□□□ -1.18
BRCA1-217ENST00000487825 AOC3Q16853 763 aa7.68□□□□□ -1.18
BRCA1-217ENST00000487825 WFDC3Q8IUB2 231 aa7.68□□□□□ -1.18
BRCA1-217ENST00000487825 MISP3Q96FF7 219 aa7.68□□□□□ -1.18
BRCA1-217ENST00000487825 WNT10AQ9GZT5 417 aa7.68□□□□□ -1.18
BRCA1-217ENST00000487825 MKNK2Q9HBH9 465 aa7.68□□□□□ -1.18
BRCA1-217ENST00000487825 CDC42BPAQ5VT25 1732 aa7.67□□□□□ -1.18
BRCA1-217ENST00000487825 F6X3S4 739 aa7.67□□□□□ -1.18
BRCA1-217ENST00000487825 EOMESO95936 686 aa7.67□□□□□ -1.18
BRCA1-217ENST00000487825 CD8BP10966 210 aa7.67□□□□□ -1.18
BRCA1-217ENST00000487825 TFE3P19532 575 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-217ENST00000487825 GRK4P32298 578 aa7.67□□□□□ -1.18
BRCA1-217ENST00000487825 PRKCQQ04759 706 aa7.67□□□□□ -1.18
BRCA1-217ENST00000487825 SLBPQ14493 270 aaKnown RBP eCLIP7.67□□□□□ -1.18
BRCA1-217ENST00000487825 JARID2Q92833 1246 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-217ENST00000487825 HRASLS5Q96KN8 279 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms