RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 NEDD4P46934 1319 aa15.72■□□□□ 0.11
COL4A6-207ENST00000487645 WDR33Q9C0J8 1336 aaKnown RBP15.72■□□□□ 0.11
COL4A6-207ENST00000487645 B4E1Z4 1266 aa15.72■□□□□ 0.11
COL4A6-207ENST00000487645 IRF6O14896 467 aa15.72■□□□□ 0.11
COL4A6-207ENST00000487645 INHBEP58166 350 aa15.72■□□□□ 0.11
COL4A6-207ENST00000487645 CCDC178Q5BJE1 867 aa15.72■□□□□ 0.11
COL4A6-207ENST00000487645 PAXIP1Q6ZW49 1069 aaPredicted RBP15.72■□□□□ 0.11
COL4A6-207ENST00000487645 REM2Q8IYK8 340 aaPredicted RBP15.72■□□□□ 0.11
COL4A6-207ENST00000487645 TAF6LQ9Y6J9 622 aa15.72■□□□□ 0.11
COL4A6-207ENST00000487645 MANSC4A6NHS7 340 aaPredicted RBP15.71■□□□□ 0.11
COL4A6-207ENST00000487645 C19orf81C9J6K1 198 aa15.71■□□□□ 0.11
COL4A6-207ENST00000487645 USP17L10C9JJH3 530 aa15.71■□□□□ 0.11
COL4A6-207ENST00000487645 KDM4AO75164 1064 aa15.71■□□□□ 0.11
COL4A6-207ENST00000487645 MAP2K2P36507 400 aa15.71■□□□□ 0.11
COL4A6-207ENST00000487645 NOVP48745 357 aa15.71■□□□□ 0.11
COL4A6-207ENST00000487645 VEGFBP49765 207 aa15.71■□□□□ 0.11
COL4A6-207ENST00000487645 GTF2A2P52657 109 aa15.71■□□□□ 0.11
COL4A6-207ENST00000487645 SPP2Q13103 211 aa15.71■□□□□ 0.11
COL4A6-207ENST00000487645 SNAPC2Q13487 334 aa15.71■□□□□ 0.11
COL4A6-207ENST00000487645 STOX1Q6ZVD7 989 aa15.71■□□□□ 0.11
COL4A6-207ENST00000487645 RALYLQ86SE5 291 aaKnown RBP15.71■□□□□ 0.11
COL4A6-207ENST00000487645 IQCA1Q86XH1 822 aa15.71■□□□□ 0.11
COL4A6-207ENST00000487645 SIAH1Q8IUQ4 282 aa15.71■□□□□ 0.11
COL4A6-207ENST00000487645 RASEFQ8IZ41 740 aa15.71■□□□□ 0.11
COL4A6-207ENST00000487645 MKL1Q969V6 931 aa15.71■□□□□ 0.11
COL4A6-207ENST00000487645 TTC14Q96N46 770 aa15.71■□□□□ 0.11
COL4A6-207ENST00000487645 ARHGEF10LQ9HCE6 1279 aa15.71■□□□□ 0.11
COL4A6-207ENST00000487645 MTMR4Q9NYA4 1195 aa15.71■□□□□ 0.11
COL4A6-207ENST00000487645 NYAP2Q9P242 653 aa15.71■□□□□ 0.11
COL4A6-207ENST00000487645 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.71■□□□□ 0.11
COL4A6-207ENST00000487645 SYNPO2Q9UMS6 1093 aa15.71■□□□□ 0.11
COL4A6-207ENST00000487645 TESPA1A2RU30 521 aaPredicted RBP15.7■□□□□ 0.1
COL4A6-207ENST00000487645 HMGB1P09429 215 aaKnown RBP15.7■□□□□ 0.1
COL4A6-207ENST00000487645 EEF2P13639 858 aaKnown RBP15.7■□□□□ 0.1
COL4A6-207ENST00000487645 ICA1Q05084 483 aa15.7■□□□□ 0.1
COL4A6-207ENST00000487645 DNAJC5GQ8N7S2 189 aa15.7■□□□□ 0.1
COL4A6-207ENST00000487645 CEP95Q96GE4 821 aa15.7■□□□□ 0.1
COL4A6-207ENST00000487645 MS4A4AQ96JQ5 239 aa15.7■□□□□ 0.1
COL4A6-207ENST00000487645 MTA3Q9BTC8 594 aa15.7■□□□□ 0.1
COL4A6-207ENST00000487645 BACH2Q9BYV9 841 aa15.7■□□□□ 0.1
COL4A6-207ENST00000487645 KIAA1683Q9H0B3 1180 aa15.7■□□□□ 0.1
COL4A6-207ENST00000487645 IL17RBQ9NRM6 502 aa15.7■□□□□ 0.1
COL4A6-207ENST00000487645 SNX14Q9Y5W7 946 aa15.7■□□□□ 0.1
COL4A6-207ENST00000487645 CEP350Q5VT06 3117 aa15.7■□□□□ 0.1
COL4A6-207ENST00000487645 A0A0G2JLL6 359 aaPredicted RBP15.69■□□□□ 0.1
COL4A6-207ENST00000487645 TTLL1O95922 423 aa15.69■□□□□ 0.1
COL4A6-207ENST00000487645 CETPP11597 493 aa15.69■□□□□ 0.1
COL4A6-207ENST00000487645 TM4SF4P48230 202 aa15.69■□□□□ 0.1
COL4A6-207ENST00000487645 BACE1P56817 501 aa15.69■□□□□ 0.1
COL4A6-207ENST00000487645 ANAPC15P60006 121 aa15.69■□□□□ 0.1
COL4A6-207ENST00000487645 SH3D19Q5HYK7 790 aa15.69■□□□□ 0.1
COL4A6-207ENST00000487645 FASTKD5Q7L8L6 764 aaKnown RBP15.69■□□□□ 0.1
COL4A6-207ENST00000487645 PRRT2Q7Z6L0 340 aaPredicted RBP15.69■□□□□ 0.1
COL4A6-207ENST00000487645 CCDC84Q86UT8 332 aaPredicted RBP15.69■□□□□ 0.1
COL4A6-207ENST00000487645 DGKHQ86XP1 1220 aa15.69■□□□□ 0.1
COL4A6-207ENST00000487645 NKX2-3Q8TAU0 364 aa15.69■□□□□ 0.1
COL4A6-207ENST00000487645 NEK1Q96PY6 1258 aa15.69■□□□□ 0.1
COL4A6-207ENST00000487645 SH2D4AQ9H788 454 aa15.69■□□□□ 0.1
COL4A6-207ENST00000487645 CLIP2Q9UDT6 1046 aa15.69■□□□□ 0.1
COL4A6-207ENST00000487645 TMX2Q9Y320 296 aa15.69■□□□□ 0.1
COL4A6-207ENST00000487645 A0A1W2PRG0 241 aa15.68■□□□□ 0.1
COL4A6-207ENST00000487645 TRIM75PA6NK02 468 aa15.68■□□□□ 0.1
COL4A6-207ENST00000487645 PSMA5P28066 241 aa15.68■□□□□ 0.1
COL4A6-207ENST00000487645 MCM5P33992 734 aa15.68■□□□□ 0.1
COL4A6-207ENST00000487645 USP14P54578 494 aa15.68■□□□□ 0.1
COL4A6-207ENST00000487645 KIF23Q02241 960 aaPredicted RBP15.68■□□□□ 0.1
COL4A6-207ENST00000487645 SREBF2Q12772 1141 aa15.68■□□□□ 0.1
COL4A6-207ENST00000487645 MKRN3Q13064 507 aaKnown RBP15.68■□□□□ 0.1
COL4A6-207ENST00000487645 GRM1Q13255 1194 aa15.68■□□□□ 0.1
COL4A6-207ENST00000487645 USP17L2Q6R6M4 530 aa15.68■□□□□ 0.1
COL4A6-207ENST00000487645 CYB5R4Q7L1T6 521 aa15.68■□□□□ 0.1
COL4A6-207ENST00000487645 MB21D2Q8IYB1 491 aaPredicted RBP15.68■□□□□ 0.1
COL4A6-207ENST00000487645 ACER1Q8TDN7 264 aa15.68■□□□□ 0.1
COL4A6-207ENST00000487645 ANKS1AQ92625 1134 aa15.68■□□□□ 0.1
COL4A6-207ENST00000487645 ZSCAN10Q96SZ4 725 aaPredicted RBP15.68■□□□□ 0.1
COL4A6-207ENST00000487645 TM6SF1Q9BZW5 370 aa15.68■□□□□ 0.1
COL4A6-207ENST00000487645 WDR19Q8NEZ3 1342 aa15.68■□□□□ 0.1
COL4A6-207ENST00000487645 NMT2O60551 498 aa15.67■□□□□ 0.1
COL4A6-207ENST00000487645 AOC2O75106 756 aa15.67■□□□□ 0.1
COL4A6-207ENST00000487645 SART3Q15020 963 aaKnown RBP15.67■□□□□ 0.1
COL4A6-207ENST00000487645 ADCK5Q3MIX3 580 aa15.67■□□□□ 0.1
COL4A6-207ENST00000487645 DHX32Q7L7V1 743 aaKnown RBP15.67■□□□□ 0.1
COL4A6-207ENST00000487645 PROCA1Q8NCQ7 364 aaPredicted RBP15.67■□□□□ 0.1
COL4A6-207ENST00000487645 IL17RAQ96F46 866 aa15.67■□□□□ 0.1
COL4A6-207ENST00000487645 C12orf42Q96LP6 360 aa15.67■□□□□ 0.1
COL4A6-207ENST00000487645 FEZ1Q99689 392 aa15.67■□□□□ 0.1
COL4A6-207ENST00000487645 UBAC1Q9BSL1 405 aa15.67■□□□□ 0.1
COL4A6-207ENST00000487645 UPF2Q9HAU5 1272 aaKnown RBP15.67■□□□□ 0.1
COL4A6-207ENST00000487645 LOC285556D6RIA3 1793 aa15.67■□□□□ 0.1
COL4A6-207ENST00000487645 CCL15-CCL14A0A0B4J2E2 113 aa15.66■□□□□ 0.1
COL4A6-207ENST00000487645 EXOSC10Q01780 885 aaKnown RBP15.66■□□□□ 0.1
COL4A6-207ENST00000487645 ATP2B2Q01814 1243 aa15.66■□□□□ 0.1
COL4A6-207ENST00000487645 MTMR2Q13614 643 aa15.66■□□□□ 0.1
COL4A6-207ENST00000487645 MOGSQ13724 837 aa15.66■□□□□ 0.1
COL4A6-207ENST00000487645 CCL15Q16663 113 aa15.66■□□□□ 0.1
COL4A6-207ENST00000487645 RCSD1Q6JBY9 416 aa15.66■□□□□ 0.1
COL4A6-207ENST00000487645 CLEC10AQ8IUN9 316 aa15.66■□□□□ 0.1
COL4A6-207ENST00000487645 TMEM87BQ96K49 555 aa15.66■□□□□ 0.1
COL4A6-207ENST00000487645 ZKSCAN3Q9BRR0 538 aa15.66■□□□□ 0.1
COL4A6-207ENST00000487645 VCPKMTQ9H867 229 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms