RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 RAET1EQ8TD07 263 aa12.74□□□□□ -0.37
TOP3B-216ENST00000487485 ESYT1Q9BSJ8 1104 aa12.74□□□□□ -0.37
TOP3B-216ENST00000487485 ZNF341Q9BYN7 854 aa12.74□□□□□ -0.37
TOP3B-216ENST00000487485 NAPBQ9H115 298 aa12.74□□□□□ -0.37
TOP3B-216ENST00000487485 ARPP21Q9UBL0 812 aaPredicted RBP12.74□□□□□ -0.37
TOP3B-216ENST00000487485 HERC5Q9UII4 1024 aaKnown RBP12.74□□□□□ -0.37
TOP3B-216ENST00000487485 LAMA3Q16787 3333 aa12.74□□□□□ -0.37
TOP3B-216ENST00000487485 CYP2D7A0A087X1C5 515 aa12.73□□□□□ -0.37
TOP3B-216ENST00000487485 FAM196BA6NMK8 535 aa12.73□□□□□ -0.37
TOP3B-216ENST00000487485 MINDY4BA8MYZ0 360 aa12.73□□□□□ -0.37
TOP3B-216ENST00000487485 PDHXO00330 501 aa12.73□□□□□ -0.37
TOP3B-216ENST00000487485 FGAP02671 866 aa12.73□□□□□ -0.37
TOP3B-216ENST00000487485 HOXD10P28358 340 aa12.73□□□□□ -0.37
TOP3B-216ENST00000487485 EVX2Q03828 476 aa12.73□□□□□ -0.37
TOP3B-216ENST00000487485 PPATQ06203 517 aa12.73□□□□□ -0.37
TOP3B-216ENST00000487485 ALX1Q15699 326 aa12.73□□□□□ -0.37
TOP3B-216ENST00000487485 METTL16Q86W50 562 aaKnown RBP12.73□□□□□ -0.37
TOP3B-216ENST00000487485 NKX2-3Q8TAU0 364 aa12.73□□□□□ -0.37
TOP3B-216ENST00000487485 TRIM34Q9BYJ4 488 aa12.73□□□□□ -0.37
TOP3B-216ENST00000487485 RNF208Q9H0X6 261 aa12.73□□□□□ -0.37
TOP3B-216ENST00000487485 EHD4Q9H223 541 aa12.73□□□□□ -0.37
TOP3B-216ENST00000487485 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.73□□□□□ -0.37
TOP3B-216ENST00000487485 SERPINB13Q9UIV8 391 aa12.73□□□□□ -0.37
TOP3B-216ENST00000487485 ATAD5Q96QE3 1844 aa12.72□□□□□ -0.37
TOP3B-216ENST00000487485 ADGRA2Q96PE1 1338 aa12.72□□□□□ -0.37
TOP3B-216ENST00000487485 MOGSQ13724 837 aa12.72□□□□□ -0.37
TOP3B-216ENST00000487485 ANKRD23Q86SG2 305 aa12.72□□□□□ -0.37
TOP3B-216ENST00000487485 HTATIP2Q9BUP3 242 aa12.72□□□□□ -0.37
TOP3B-216ENST00000487485 DSCC1Q9BVC3 393 aa12.72□□□□□ -0.37
TOP3B-216ENST00000487485 BIN2Q9UBW5 565 aaPredicted RBP12.72□□□□□ -0.37
TOP3B-216ENST00000487485 ZNF112Q9UJU3 913 aa12.72□□□□□ -0.37
TOP3B-216ENST00000487485 DOCK3Q8IZD9 2030 aa12.72□□□□□ -0.37
TOP3B-216ENST00000487485 MYPNQ86TC9 1320 aa12.71□□□□□ -0.37
TOP3B-216ENST00000487485 PHF20L1A8MW92 1017 aa12.71□□□□□ -0.37
TOP3B-216ENST00000487485 SMIM22K7EJ46 135 aa12.71□□□□□ -0.37
TOP3B-216ENST00000487485 PTH1RQ03431 593 aa12.71□□□□□ -0.37
TOP3B-216ENST00000487485 PRKCZQ05513 592 aa12.71□□□□□ -0.37
TOP3B-216ENST00000487485 KIAA1211Q6ZU35 1233 aa12.71□□□□□ -0.37
TOP3B-216ENST00000487485 DYNLL2Q96FJ2 89 aa12.71□□□□□ -0.37
TOP3B-216ENST00000487485 UNC93B1Q9H1C4 597 aa12.71□□□□□ -0.37
TOP3B-216ENST00000487485 DNAJC18Q9H819 358 aa12.71□□□□□ -0.37
TOP3B-216ENST00000487485 NR2E3Q9Y5X4 410 aa12.71□□□□□ -0.37
TOP3B-216ENST00000487485 ZMYM6O95789 1325 aa12.7□□□□□ -0.38
TOP3B-216ENST00000487485 SOX1O00570 391 aaPredicted RBP12.7□□□□□ -0.38
TOP3B-216ENST00000487485 GABPAQ06546 454 aa12.7□□□□□ -0.38
TOP3B-216ENST00000487485 PPARAQ07869 468 aa12.7□□□□□ -0.38
TOP3B-216ENST00000487485 STK11IPQ8N1F8 1099 aa12.7□□□□□ -0.38
TOP3B-216ENST00000487485 U2AF1L4Q8WU68 220 aaKnown RBP12.7□□□□□ -0.38
TOP3B-216ENST00000487485 GABRQQ9UN88 632 aa12.7□□□□□ -0.38
TOP3B-216ENST00000487485 KCNH4Q9UQ05 1017 aa12.7□□□□□ -0.38
TOP3B-216ENST00000487485 DOCK1Q14185 1865 aa12.7□□□□□ -0.38
TOP3B-216ENST00000487485 LAMA4Q16363 1823 aa12.69□□□□□ -0.38
TOP3B-216ENST00000487485 ZNF213O14771 459 aa12.69□□□□□ -0.38
TOP3B-216ENST00000487485 FARP2O94887 1054 aaPredicted RBP12.69□□□□□ -0.38
TOP3B-216ENST00000487485 SLC3A2P08195 630 aaKnown RBP12.69□□□□□ -0.38
TOP3B-216ENST00000487485 CYP2C8P10632 490 aa12.69□□□□□ -0.38
TOP3B-216ENST00000487485 BCRP11274 1271 aa12.69□□□□□ -0.38
TOP3B-216ENST00000487485 SHMT1P34896 483 aa12.69□□□□□ -0.38
TOP3B-216ENST00000487485 CDK8P49336 464 aa12.69□□□□□ -0.38
TOP3B-216ENST00000487485 UBXN2AP68543 259 aa12.69□□□□□ -0.38
TOP3B-216ENST00000487485 CTDSPL2Q05D32 466 aa12.69□□□□□ -0.38
TOP3B-216ENST00000487485 RRP1BQ14684 758 aaKnown RBP12.69□□□□□ -0.38
TOP3B-216ENST00000487485 GPAT2Q6NUI2 795 aa12.69□□□□□ -0.38
TOP3B-216ENST00000487485 TATDN1Q6P1N9 297 aa12.69□□□□□ -0.38
TOP3B-216ENST00000487485 C16orf86Q6ZW13 317 aa12.69□□□□□ -0.38
TOP3B-216ENST00000487485 SLC44A5Q8NCS7 719 aa12.69□□□□□ -0.38
TOP3B-216ENST00000487485 MAP4K1Q92918 833 aa12.69□□□□□ -0.38
TOP3B-216ENST00000487485 LRCH3Q96II8 777 aa12.69□□□□□ -0.38
TOP3B-216ENST00000487485 LSG1Q9H089 658 aaKnown RBP12.69□□□□□ -0.38
TOP3B-216ENST00000487485 ANO2Q9NQ90 1003 aa12.69□□□□□ -0.38
TOP3B-216ENST00000487485 SWAP70Q9UH65 585 aa12.69□□□□□ -0.38
TOP3B-216ENST00000487485 CTNNA3Q9UI47 895 aa12.69□□□□□ -0.38
TOP3B-216ENST00000487485 TAOK2Q9UL54 1235 aa12.69□□□□□ -0.38
TOP3B-216ENST00000487485 CTNND1O60716 968 aaKnown RBP12.68□□□□□ -0.38
TOP3B-216ENST00000487485 SGPL1O95470 568 aa12.68□□□□□ -0.38
TOP3B-216ENST00000487485 CAP2P40123 477 aa12.68□□□□□ -0.38
TOP3B-216ENST00000487485 FCGRTP55899 365 aa12.68□□□□□ -0.38
TOP3B-216ENST00000487485 HAND2P61296 217 aa12.68□□□□□ -0.38
TOP3B-216ENST00000487485 PDE4BQ07343 736 aa12.68□□□□□ -0.38
TOP3B-216ENST00000487485 CERKLQ49MI3 558 aaPredicted RBP12.68□□□□□ -0.38
TOP3B-216ENST00000487485 MKNK2Q9HBH9 465 aa12.68□□□□□ -0.38
TOP3B-216ENST00000487485 ANAPC4Q9UJX5 808 aa12.68□□□□□ -0.38
TOP3B-216ENST00000487485 U3KPZ7 1027 aaPredicted RBP12.68□□□□□ -0.38
TOP3B-216ENST00000487485 ROBO3Q96MS0 1386 aa12.68□□□□□ -0.38
TOP3B-216ENST00000487485 EVI5O60447 810 aa12.67□□□□□ -0.38
TOP3B-216ENST00000487485 GDF11O95390 407 aa12.67□□□□□ -0.38
TOP3B-216ENST00000487485 IMMTQ16891 758 aaKnown RBP12.67□□□□□ -0.38
TOP3B-216ENST00000487485 NOL9Q5SY16 702 aaKnown RBP12.67□□□□□ -0.38
TOP3B-216ENST00000487485 SCYL3Q8IZE3 742 aa12.67□□□□□ -0.38
TOP3B-216ENST00000487485 SLAIN1Q8ND83 568 aa12.67□□□□□ -0.38
TOP3B-216ENST00000487485 ZNF287Q9HBT7 754 aa12.67□□□□□ -0.38
TOP3B-216ENST00000487485 INCENPQ9NQS7 918 aa12.67□□□□□ -0.38
TOP3B-216ENST00000487485 RBM8AQ9Y5S9 174 aaKnown RBP12.67□□□□□ -0.38
TOP3B-216ENST00000487485 PHIPQ8WWQ0 1821 aa12.67□□□□□ -0.38
TOP3B-216ENST00000487485 MGAMO43451 1857 aa12.66□□□□□ -0.38
TOP3B-216ENST00000487485 CXCL11O14625 94 aa12.66□□□□□ -0.38
TOP3B-216ENST00000487485 ADCY3O60266 1144 aa12.66□□□□□ -0.38
TOP3B-216ENST00000487485 PRDM1O75626 825 aa12.66□□□□□ -0.38
TOP3B-216ENST00000487485 TFRCP02786 760 aaKnown RBP12.66□□□□□ -0.38
TOP3B-216ENST00000487485 ELNP15502 786 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms