RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 PAGR1Q9BTK6 254 aa14.79□□□□□ -0.04
VPS16-208ENST00000487461 CRNKL1Q9BZJ0 848 aaKnown RBP14.79□□□□□ -0.04
VPS16-208ENST00000487461 KIAA1683Q9H0B3 1180 aa14.79□□□□□ -0.04
VPS16-208ENST00000487461 PORCNQ9H237 461 aa14.79□□□□□ -0.04
VPS16-208ENST00000487461 BOLA2Q9H3K6 86 aa14.79□□□□□ -0.04
VPS16-208ENST00000487461 CABP5Q9NP86 173 aa14.79□□□□□ -0.04
VPS16-208ENST00000487461 MCM9Q9NXL9 1143 aa14.79□□□□□ -0.04
VPS16-208ENST00000487461 RPTORQ8N122 1335 aa14.78□□□□□ -0.04
VPS16-208ENST00000487461 USP17L15C9J2P7 530 aa14.78□□□□□ -0.04
VPS16-208ENST00000487461 USP17L13C9JLJ4 530 aa14.78□□□□□ -0.04
VPS16-208ENST00000487461 USP17L11C9JVI0 530 aa14.78□□□□□ -0.04
VPS16-208ENST00000487461 USP17L18D6R9N7 530 aa14.78□□□□□ -0.04
VPS16-208ENST00000487461 USP17L22D6RA61 530 aa14.78□□□□□ -0.04
VPS16-208ENST00000487461 USP17L17D6RBQ6 530 aa14.78□□□□□ -0.04
VPS16-208ENST00000487461 USP17L19D6RCP7 530 aa14.78□□□□□ -0.04
VPS16-208ENST00000487461 USP17L20D6RJB6 530 aa14.78□□□□□ -0.04
VPS16-208ENST00000487461 CNMDO75829 334 aa14.78□□□□□ -0.04
VPS16-208ENST00000487461 MAPK4P31152 587 aa14.78□□□□□ -0.04
VPS16-208ENST00000487461 USP17L24Q0WX57 530 aa14.78□□□□□ -0.04
VPS16-208ENST00000487461 C20orf194Q5TEA3 1177 aa14.78□□□□□ -0.04
VPS16-208ENST00000487461 LCORLQ8N3X6 602 aa14.78□□□□□ -0.04
VPS16-208ENST00000487461 GTF3C2Q8WUA4 911 aaPredicted RBP14.78□□□□□ -0.04
VPS16-208ENST00000487461 SDR42E1Q8WUS8 393 aa14.78□□□□□ -0.04
VPS16-208ENST00000487461 USP6NLQ92738 828 aa14.78□□□□□ -0.04
VPS16-208ENST00000487461 PAWRQ96IZ0 340 aaKnown RBP14.78□□□□□ -0.04
VPS16-208ENST00000487461 HMX1Q9NP08 348 aaPredicted RBP14.78□□□□□ -0.04
VPS16-208ENST00000487461 PRKAB2O43741 272 aa14.77□□□□□ -0.05
VPS16-208ENST00000487461 CYP2D6P10635 497 aa14.77□□□□□ -0.05
VPS16-208ENST00000487461 XRCC5P13010 732 aaKnown RBP14.77□□□□□ -0.05
VPS16-208ENST00000487461 ATP5JP18859 108 aa14.77□□□□□ -0.05
VPS16-208ENST00000487461 USP14P54578 494 aa14.77□□□□□ -0.05
VPS16-208ENST00000487461 SEPT2Q15019 361 aa14.77□□□□□ -0.05
VPS16-208ENST00000487461 MORN1Q5T089 497 aa14.77□□□□□ -0.05
VPS16-208ENST00000487461 GPR142Q7Z601 462 aa14.77□□□□□ -0.05
VPS16-208ENST00000487461 PLEKHH3Q7Z736 793 aa14.77□□□□□ -0.05
VPS16-208ENST00000487461 DIS3LQ8TF46 1054 aaKnown RBP14.77□□□□□ -0.05
VPS16-208ENST00000487461 CHMP4BQ9H444 224 aaKnown RBP14.77□□□□□ -0.05
VPS16-208ENST00000487461 ARMT1Q9H993 441 aa14.77□□□□□ -0.05
VPS16-208ENST00000487461 DCP1AQ9NPI6 582 aaPredicted RBP14.77□□□□□ -0.05
VPS16-208ENST00000487461 PAG1Q9NWQ8 432 aa14.77□□□□□ -0.05
VPS16-208ENST00000487461 RBM27Q9P2N5 1060 aaKnown RBP14.77□□□□□ -0.05
VPS16-208ENST00000487461 RABGAP1Q9Y3P9 1069 aa14.77□□□□□ -0.05
VPS16-208ENST00000487461 NR2E3Q9Y5X4 410 aa14.77□□□□□ -0.05
VPS16-208ENST00000487461 TRIOBPQ9H2D6 2365 aa14.76□□□□□ -0.05
VPS16-208ENST00000487461 EVI5O60447 810 aa14.76□□□□□ -0.05
VPS16-208ENST00000487461 CHGBP05060 677 aa14.76□□□□□ -0.05
VPS16-208ENST00000487461 VCAM1P19320 739 aa14.76□□□□□ -0.05
VPS16-208ENST00000487461 ADD2P35612 726 aa14.76□□□□□ -0.05
VPS16-208ENST00000487461 MAP3K21Q5TCX8 1036 aa14.76□□□□□ -0.05
VPS16-208ENST00000487461 CCAR1Q8IX12 1150 aaKnown RBP14.76□□□□□ -0.05
VPS16-208ENST00000487461 SOCS4Q8WXH5 440 aa14.76□□□□□ -0.05
VPS16-208ENST00000487461 PLXNB2O15031 1838 aa14.76□□□□□ -0.05
VPS16-208ENST00000487461 A0A1W2PRG0 241 aa14.75□□□□□ -0.05
VPS16-208ENST00000487461 MPHOSPH10O00566 681 aaKnown RBP14.75□□□□□ -0.05
VPS16-208ENST00000487461 MNX1P50219 401 aaPredicted RBP14.75□□□□□ -0.05
VPS16-208ENST00000487461 CACNB2Q08289 660 aaPredicted RBP14.75□□□□□ -0.05
VPS16-208ENST00000487461 PDE3AQ14432 1141 aa14.75□□□□□ -0.05
VPS16-208ENST00000487461 CCL14Q16627 93 aa14.75□□□□□ -0.05
VPS16-208ENST00000487461 NECAB2Q7Z6G3 386 aa14.75□□□□□ -0.05
VPS16-208ENST00000487461 SLC44A5Q8NCS7 719 aa14.75□□□□□ -0.05
VPS16-208ENST00000487461 DYNLL2Q96FJ2 89 aa14.75□□□□□ -0.05
VPS16-208ENST00000487461 HAUS7Q99871 368 aa14.75□□□□□ -0.05
VPS16-208ENST00000487461 PRO3102Q9H379 93 aa14.75□□□□□ -0.05
VPS16-208ENST00000487461 BTBD7Q9P203 1132 aa14.75□□□□□ -0.05
VPS16-208ENST00000487461 SMIM22K7EJ46 135 aa14.74□□□□□ -0.05
VPS16-208ENST00000487461 SMARCA5O60264 1052 aaPredicted RBP14.74□□□□□ -0.05
VPS16-208ENST00000487461 MBD4O95243 580 aa14.74□□□□□ -0.05
VPS16-208ENST00000487461 PRKAR2AP13861 404 aaKnown RBP14.74□□□□□ -0.05
VPS16-208ENST00000487461 RGS2P41220 211 aa14.74□□□□□ -0.05
VPS16-208ENST00000487461 LBX2Q6XYB7 198 aa14.74□□□□□ -0.05
VPS16-208ENST00000487461 TRMT44Q8IYL2 757 aaKnown RBP14.74□□□□□ -0.05
VPS16-208ENST00000487461 ANKLE1Q8NAG6 615 aa14.74□□□□□ -0.05
VPS16-208ENST00000487461 RPAP3Q9H6T3 665 aaPredicted RBP14.74□□□□□ -0.05
VPS16-208ENST00000487461 OGDHLQ9ULD0 1010 aa14.74□□□□□ -0.05
VPS16-208ENST00000487461 SPDYE16A6NNV3 312 aaPredicted RBP14.73□□□□□ -0.05
VPS16-208ENST00000487461 ZKSCAN1P17029 563 aaPredicted RBP14.73□□□□□ -0.05
VPS16-208ENST00000487461 CCNA1P78396 465 aa14.73□□□□□ -0.05
VPS16-208ENST00000487461 MAP2K5Q13163 448 aa14.73□□□□□ -0.05
VPS16-208ENST00000487461 KIAA1755Q5JYT7 1200 aa14.73□□□□□ -0.05
VPS16-208ENST00000487461 SIAH1Q8IUQ4 282 aa14.73□□□□□ -0.05
VPS16-208ENST00000487461 LRRCC1Q9C099 1032 aa14.73□□□□□ -0.05
VPS16-208ENST00000487461 ATP8A2Q9NTI2 1148 aa14.73□□□□□ -0.05
VPS16-208ENST00000487461 CYP2D7A0A087X1C5 515 aa14.72□□□□□ -0.05
VPS16-208ENST00000487461 PTPREP23469 700 aa14.72□□□□□ -0.05
VPS16-208ENST00000487461 CCND3P30281 292 aaPredicted RBP14.72□□□□□ -0.05
VPS16-208ENST00000487461 UBE3CQ15386 1083 aa14.72□□□□□ -0.05
VPS16-208ENST00000487461 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.72□□□□□ -0.05
VPS16-208ENST00000487461 NBPF3Q9H094 633 aa14.72□□□□□ -0.05
VPS16-208ENST00000487461 CWC22Q9HCG8 908 aaKnown RBP14.72□□□□□ -0.05
VPS16-208ENST00000487461 FLRT1Q9NZU1 646 aa14.72□□□□□ -0.05
VPS16-208ENST00000487461 SWAP70Q9UH65 585 aa14.72□□□□□ -0.05
VPS16-208ENST00000487461 SLC15A5A6NIM6 579 aa14.71□□□□□ -0.05
VPS16-208ENST00000487461 USP17L12C9JPN9 530 aa14.71□□□□□ -0.05
VPS16-208ENST00000487461 USP17L21D6R901 530 aa14.71□□□□□ -0.05
VPS16-208ENST00000487461 GLRX3O76003 335 aaKnown RBP14.71□□□□□ -0.05
VPS16-208ENST00000487461 AKR1B1P15121 316 aa14.71□□□□□ -0.05
VPS16-208ENST00000487461 CDK8P49336 464 aa14.71□□□□□ -0.05
VPS16-208ENST00000487461 COG2Q14746 738 aa14.71□□□□□ -0.05
VPS16-208ENST00000487461 C12orf60Q5U649 245 aa14.71□□□□□ -0.05
VPS16-208ENST00000487461 WDR78Q5VTH9 848 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms