RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 SPP2Q13103 211 aa15.07■□□□□ 0
PRDM2-208ENST00000487453 SNAPC2Q13487 334 aa15.07■□□□□ 0
PRDM2-208ENST00000487453 MTMR2Q13614 643 aa15.07■□□□□ 0
PRDM2-208ENST00000487453 ZYXQ15942 572 aaKnown RBP15.07■□□□□ 0
PRDM2-208ENST00000487453 STOX1Q6ZVD7 989 aa15.07■□□□□ 0
PRDM2-208ENST00000487453 NCOA7Q8NI08 942 aa15.07■□□□□ 0
PRDM2-208ENST00000487453 ARHGEF10LQ9HCE6 1279 aa15.07■□□□□ 0
PRDM2-208ENST00000487453 MYH4Q9Y623 1939 aa15.07■□□□□ 0
PRDM2-208ENST00000487453 MANSC4A6NHS7 340 aaPredicted RBP15.06■□□□□ 0
PRDM2-208ENST00000487453 EPB41L2O43491 1005 aaKnown RBP15.06■□□□□ 0
PRDM2-208ENST00000487453 HSPA4P34932 840 aa15.06■□□□□ 0
PRDM2-208ENST00000487453 GTF2A2P52657 109 aa15.06■□□□□ 0
PRDM2-208ENST00000487453 KIF23Q02241 960 aaPredicted RBP15.06■□□□□ 0
PRDM2-208ENST00000487453 SREBF2Q12772 1141 aa15.06■□□□□ 0
PRDM2-208ENST00000487453 NEDD1Q8NHV4 660 aa15.06■□□□□ 0
PRDM2-208ENST00000487453 CEP95Q96GE4 821 aa15.06■□□□□ 0
PRDM2-208ENST00000487453 ZKSCAN3Q9BRR0 538 aa15.06■□□□□ 0
PRDM2-208ENST00000487453 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.06■□□□□ 0
PRDM2-208ENST00000487453 KANSL2Q9H9L4 492 aa15.06■□□□□ 0
PRDM2-208ENST00000487453 STX8Q9UNK0 236 aa15.06■□□□□ 0
PRDM2-208ENST00000487453 AFG3L2Q9Y4W6 797 aa15.06■□□□□ 0
PRDM2-208ENST00000487453 CCL15-CCL14A0A0B4J2E2 113 aa15.05■□□□□ -0
PRDM2-208ENST00000487453 USP17L10C9JJH3 530 aa15.05■□□□□ -0
PRDM2-208ENST00000487453 RAD21O60216 631 aa15.05■□□□□ -0
PRDM2-208ENST00000487453 NMT2O60551 498 aa15.05■□□□□ -0
PRDM2-208ENST00000487453 SEC24BO95487 1268 aa15.05■□□□□ -0
PRDM2-208ENST00000487453 CETPP11597 493 aa15.05■□□□□ -0
PRDM2-208ENST00000487453 EEF2P13639 858 aaKnown RBP15.05■□□□□ -0
PRDM2-208ENST00000487453 CCL15Q16663 113 aa15.05■□□□□ -0
PRDM2-208ENST00000487453 GADL1Q6ZQY3 521 aa15.05■□□□□ -0
PRDM2-208ENST00000487453 IQCA1Q86XH1 822 aa15.05■□□□□ -0
PRDM2-208ENST00000487453 ACER1Q8TDN7 264 aa15.05■□□□□ -0
PRDM2-208ENST00000487453 ZIC5Q96T25 663 aa15.05■□□□□ -0
PRDM2-208ENST00000487453 UBAC1Q9BSL1 405 aa15.05■□□□□ -0
PRDM2-208ENST00000487453 WDR18Q9BV38 432 aa15.05■□□□□ -0
PRDM2-208ENST00000487453 USP26Q9BXU7 913 aa15.05■□□□□ -0
PRDM2-208ENST00000487453 SH2D4AQ9H788 454 aa15.05■□□□□ -0
PRDM2-208ENST00000487453 KCNH4Q9UQ05 1017 aa15.05■□□□□ -0
PRDM2-208ENST00000487453 IGKV6D-41A0A0C4DH26 115 aa15.04■□□□□ -0
PRDM2-208ENST00000487453 CXCL11O14625 94 aa15.04■□□□□ -0
PRDM2-208ENST00000487453 NT5C2P49902 561 aa15.04■□□□□ -0
PRDM2-208ENST00000487453 HMGCS2P54868 508 aa15.04■□□□□ -0
PRDM2-208ENST00000487453 DGKZQ13574 1117 aa15.04■□□□□ -0
PRDM2-208ENST00000487453 KRT32Q14532 448 aa15.04■□□□□ -0
PRDM2-208ENST00000487453 RASEFQ8IZ41 740 aa15.04■□□□□ -0
PRDM2-208ENST00000487453 NKX2-3Q8TAU0 364 aa15.04■□□□□ -0
PRDM2-208ENST00000487453 MTMR4Q9NYA4 1195 aa15.04■□□□□ -0
PRDM2-208ENST00000487453 TMOD4Q9NZQ9 345 aa15.04■□□□□ -0
PRDM2-208ENST00000487453 ZSWIM5Q9P217 1185 aa15.04■□□□□ -0
PRDM2-208ENST00000487453 CLIP2Q9UDT6 1046 aa15.04■□□□□ -0
PRDM2-208ENST00000487453 TNKSO95271 1327 aa15.03■□□□□ -0
PRDM2-208ENST00000487453 A0A0G2JLL6 359 aaPredicted RBP15.03■□□□□ -0
PRDM2-208ENST00000487453 A0A1W2PRG0 241 aa15.03■□□□□ -0
PRDM2-208ENST00000487453 TTLL1O95922 423 aa15.03■□□□□ -0
PRDM2-208ENST00000487453 MAP2K2P36507 400 aa15.03■□□□□ -0
PRDM2-208ENST00000487453 BACE1P56817 501 aa15.03■□□□□ -0
PRDM2-208ENST00000487453 PPP4R3BQ5MIZ7 849 aa15.03■□□□□ -0
PRDM2-208ENST00000487453 CYB5R4Q7L1T6 521 aa15.03■□□□□ -0
PRDM2-208ENST00000487453 PRRT2Q7Z6L0 340 aaPredicted RBP15.03■□□□□ -0
PRDM2-208ENST00000487453 POTEDQ86YR6 584 aa15.03■□□□□ -0
PRDM2-208ENST00000487453 LRRC47Q8N1G4 583 aaKnown RBP15.03■□□□□ -0
PRDM2-208ENST00000487453 MS4A4AQ96JQ5 239 aa15.03■□□□□ -0
PRDM2-208ENST00000487453 KIAA1683Q9H0B3 1180 aa15.03■□□□□ -0
PRDM2-208ENST00000487453 IL17RBQ9NRM6 502 aa15.03■□□□□ -0
PRDM2-208ENST00000487453 SNX14Q9Y5W7 946 aa15.03■□□□□ -0
PRDM2-208ENST00000487453 ERICH2A1L162 156 aa15.02■□□□□ -0
PRDM2-208ENST00000487453 C19orf81C9J6K1 198 aa15.02■□□□□ -0
PRDM2-208ENST00000487453 USP14P54578 494 aa15.02■□□□□ -0
PRDM2-208ENST00000487453 ADCK5Q3MIX3 580 aa15.02■□□□□ -0
PRDM2-208ENST00000487453 USP17L2Q6R6M4 530 aa15.02■□□□□ -0
PRDM2-208ENST00000487453 FASTKD5Q7L8L6 764 aaKnown RBP15.02■□□□□ -0
PRDM2-208ENST00000487453 CHST3Q7LGC8 479 aa15.02■□□□□ -0
PRDM2-208ENST00000487453 MB21D2Q8IYB1 491 aaPredicted RBP15.02■□□□□ -0
PRDM2-208ENST00000487453 DNAJC5GQ8N7S2 189 aa15.02■□□□□ -0
PRDM2-208ENST00000487453 BRI3BPQ8WY22 251 aa15.02■□□□□ -0
PRDM2-208ENST00000487453 JAKMIP1Q96N16 626 aaKnown RBP15.02■□□□□ -0
PRDM2-208ENST00000487453 NEK1Q96PY6 1258 aa15.02■□□□□ -0
PRDM2-208ENST00000487453 ZSCAN10Q96SZ4 725 aaPredicted RBP15.02■□□□□ -0
PRDM2-208ENST00000487453 UPF2Q9HAU5 1272 aaKnown RBP15.02■□□□□ -0
PRDM2-208ENST00000487453 GOPCQ9HD26 462 aa15.02■□□□□ -0
PRDM2-208ENST00000487453 NYAP2Q9P242 653 aa15.02■□□□□ -0
PRDM2-208ENST00000487453 TMX2Q9Y320 296 aa15.02■□□□□ -0
PRDM2-208ENST00000487453 PRC1O43663 620 aa15.01□□□□□ -0.01
PRDM2-208ENST00000487453 MCM5P33992 734 aa15.01□□□□□ -0.01
PRDM2-208ENST00000487453 INHBEP58166 350 aa15.01□□□□□ -0.01
PRDM2-208ENST00000487453 SART3Q15020 963 aaKnown RBP15.01□□□□□ -0.01
PRDM2-208ENST00000487453 SH3D19Q5HYK7 790 aa15.01□□□□□ -0.01
PRDM2-208ENST00000487453 SIAH1Q8IUQ4 282 aa15.01□□□□□ -0.01
PRDM2-208ENST00000487453 REM2Q8IYK8 340 aaPredicted RBP15.01□□□□□ -0.01
PRDM2-208ENST00000487453 PROCA1Q8NCQ7 364 aaPredicted RBP15.01□□□□□ -0.01
PRDM2-208ENST00000487453 TCP11L1Q9NUJ3 509 aa15.01□□□□□ -0.01
PRDM2-208ENST00000487453 ISY1Q9ULR0 285 aaKnown RBP15.01□□□□□ -0.01
PRDM2-208ENST00000487453 MTMR7Q9Y216 660 aa15.01□□□□□ -0.01
PRDM2-208ENST00000487453 IGF2BP3O00425 579 aaKnown RBP eCLIP15□□□□□ -0.01
PRDM2-208ENST00000487453 IFIT3O14879 490 aaKnown RBP15□□□□□ -0.01
PRDM2-208ENST00000487453 TSGA10IPQ3SY00 556 aa15□□□□□ -0.01
PRDM2-208ENST00000487453 CCDC178Q5BJE1 867 aa15□□□□□ -0.01
PRDM2-208ENST00000487453 TREML2Q5T2D2 321 aa15□□□□□ -0.01
PRDM2-208ENST00000487453 IFNL1Q8IU54 200 aa15□□□□□ -0.01
PRDM2-208ENST00000487453 SPICE1Q8N0Z3 855 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms