RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 ZDBF2Q9HCK1 2354 aa14.68□□□□□ -0.06
TRIM56-204ENST00000487252 C19orf81C9J6K1 198 aa14.68□□□□□ -0.06
TRIM56-204ENST00000487252 METTL24Q5JXM2 366 aa14.68□□□□□ -0.06
TRIM56-204ENST00000487252 ANO1Q5XXA6 986 aa14.68□□□□□ -0.06
TRIM56-204ENST00000487252 OLFML2BQ68BL8 750 aa14.68□□□□□ -0.06
TRIM56-204ENST00000487252 MFSD5Q6N075 450 aa14.68□□□□□ -0.06
TRIM56-204ENST00000487252 SLC44A5Q8NCS7 719 aa14.68□□□□□ -0.06
TRIM56-204ENST00000487252 FAM163AQ96GL9 167 aaPredicted RBP14.68□□□□□ -0.06
TRIM56-204ENST00000487252 PAGR1Q9BTK6 254 aa14.68□□□□□ -0.06
TRIM56-204ENST00000487252 NKX2-4Q9H2Z4 354 aa14.68□□□□□ -0.06
TRIM56-204ENST00000487252 SLC28A3Q9HAS3 691 aa14.68□□□□□ -0.06
TRIM56-204ENST00000487252 TBX21Q9UL17 535 aa14.68□□□□□ -0.06
TRIM56-204ENST00000487252 RABGAP1Q9Y3P9 1069 aa14.68□□□□□ -0.06
TRIM56-204ENST00000487252 PQBP1O60828 265 aaKnown RBP14.67□□□□□ -0.06
TRIM56-204ENST00000487252 CCNA1P78396 465 aa14.67□□□□□ -0.06
TRIM56-204ENST00000487252 MIER1Q8N108 512 aa14.67□□□□□ -0.06
TRIM56-204ENST00000487252 TMOD4Q9NZQ9 345 aa14.67□□□□□ -0.06
TRIM56-204ENST00000487252 ZBTB22O15209 634 aa14.66□□□□□ -0.06
TRIM56-204ENST00000487252 PPIGQ13427 754 aaKnown RBP eCLIP14.66□□□□□ -0.06
TRIM56-204ENST00000487252 PUM3Q15397 648 aaKnown RBP14.66□□□□□ -0.06
TRIM56-204ENST00000487252 FAM47AQ5JRC9 791 aa14.66□□□□□ -0.06
TRIM56-204ENST00000487252 CCDC174Q6PII3 467 aa14.66□□□□□ -0.06
TRIM56-204ENST00000487252 MTCH2Q9Y6C9 303 aa14.66□□□□□ -0.06
TRIM56-204ENST00000487252 NDUFB9Q9Y6M9 179 aa14.66□□□□□ -0.06
TRIM56-204ENST00000487252 SMCHD1A6NHR9 2005 aa14.66□□□□□ -0.06
TRIM56-204ENST00000487252 IFIT1P09914 478 aaKnown RBP14.65□□□□□ -0.06
TRIM56-204ENST00000487252 RHBDL3P58872 404 aa14.65□□□□□ -0.06
TRIM56-204ENST00000487252 PICALMQ13492 652 aa14.65□□□□□ -0.06
TRIM56-204ENST00000487252 ZNF365Q70YC5 407 aa14.65□□□□□ -0.06
TRIM56-204ENST00000487252 MICALL1Q8N3F8 863 aa14.65□□□□□ -0.06
TRIM56-204ENST00000487252 ADAMTS8Q9UP79 889 aa14.65□□□□□ -0.06
TRIM56-204ENST00000487252 ZNF521Q96K83 1311 aa14.65□□□□□ -0.06
TRIM56-204ENST00000487252 SIPA1L1O43166 1804 aa14.64□□□□□ -0.07
TRIM56-204ENST00000487252 BRWD1Q9NSI6 2320 aa14.64□□□□□ -0.07
TRIM56-204ENST00000487252 A0A1W2PQ45 241 aaPredicted RBP14.64□□□□□ -0.07
TRIM56-204ENST00000487252 A0A1W2PQY0 241 aa14.64□□□□□ -0.07
TRIM56-204ENST00000487252 ST18O60284 1047 aa14.64□□□□□ -0.07
TRIM56-204ENST00000487252 JAG1P78504 1218 aa14.64□□□□□ -0.07
TRIM56-204ENST00000487252 SKIV2LQ15477 1246 aaKnown RBP14.64□□□□□ -0.07
TRIM56-204ENST00000487252 TWISTNBQ3B726 338 aaPredicted RBP14.64□□□□□ -0.07
TRIM56-204ENST00000487252 RABL6Q3YEC7 729 aaPredicted RBP14.64□□□□□ -0.07
TRIM56-204ENST00000487252 PSRC1Q6PGN9 363 aaPredicted RBP14.64□□□□□ -0.07
TRIM56-204ENST00000487252 LBX2Q6XYB7 198 aa14.64□□□□□ -0.07
TRIM56-204ENST00000487252 CWC22Q9HCG8 908 aaKnown RBP14.64□□□□□ -0.07
TRIM56-204ENST00000487252 EMILIN3Q9NT22 766 aa14.64□□□□□ -0.07
TRIM56-204ENST00000487252 SPTBN4Q9H254 2564 aa14.64□□□□□ -0.07
TRIM56-204ENST00000487252 C5orf42Q9H799 3197 aa14.63□□□□□ -0.07
TRIM56-204ENST00000487252 DCDC2CA8MYV0 355 aa14.63□□□□□ -0.07
TRIM56-204ENST00000487252 USP17L10C9JJH3 530 aa14.63□□□□□ -0.07
TRIM56-204ENST00000487252 F6X3S4 739 aa14.63□□□□□ -0.07
TRIM56-204ENST00000487252 MYCNP04198 464 aaPredicted RBP14.63□□□□□ -0.07
TRIM56-204ENST00000487252 SLC5A1P13866 664 aa14.63□□□□□ -0.07
TRIM56-204ENST00000487252 CSF2RAP15509 400 aa14.63□□□□□ -0.07
TRIM56-204ENST00000487252 SUCLG2Q96I99 432 aa14.63□□□□□ -0.07
TRIM56-204ENST00000487252 HERC5Q9UII4 1024 aaKnown RBP14.63□□□□□ -0.07
TRIM56-204ENST00000487252 IVNS1ABPQ9Y6Y0 642 aa14.63□□□□□ -0.07
TRIM56-204ENST00000487252 A0A0G2JMZ2 1700 aa14.62□□□□□ -0.07
TRIM56-204ENST00000487252 ASNSP08243 561 aa14.62□□□□□ -0.07
TRIM56-204ENST00000487252 LPIN2Q92539 896 aa14.62□□□□□ -0.07
TRIM56-204ENST00000487252 HLA-CQ95604 372 aa14.62□□□□□ -0.07
TRIM56-204ENST00000487252 ROBO3Q96MS0 1386 aa14.61□□□□□ -0.07
TRIM56-204ENST00000487252 GPR75-ASB3A0A0A6YYF3 556 aa14.61□□□□□ -0.07
TRIM56-204ENST00000487252 ACRP10323 421 aa14.61□□□□□ -0.07
TRIM56-204ENST00000487252 BTDP43251 543 aa14.61□□□□□ -0.07
TRIM56-204ENST00000487252 TSR2Q969E8 191 aaKnown RBP14.61□□□□□ -0.07
TRIM56-204ENST00000487252 C12orf42Q96LP6 360 aa14.61□□□□□ -0.07
TRIM56-204ENST00000487252 PHOX2BQ99453 314 aa14.61□□□□□ -0.07
TRIM56-204ENST00000487252 XPNPEP3Q9NQH7 507 aa14.61□□□□□ -0.07
TRIM56-204ENST00000487252 BTBD7Q9P203 1132 aa14.61□□□□□ -0.07
TRIM56-204ENST00000487252 SEMA3EO15041 775 aa14.6□□□□□ -0.07
TRIM56-204ENST00000487252 STRNO43815 780 aa14.6□□□□□ -0.07
TRIM56-204ENST00000487252 ADORA2AP29274 412 aa14.6□□□□□ -0.07
TRIM56-204ENST00000487252 PRAMEF19Q5SWL8 479 aa14.6□□□□□ -0.07
TRIM56-204ENST00000487252 WDR78Q5VTH9 848 aa14.6□□□□□ -0.07
TRIM56-204ENST00000487252 PPP2R2DQ66LE6 453 aa14.6□□□□□ -0.07
TRIM56-204ENST00000487252 RNF180Q86T96 592 aa14.6□□□□□ -0.07
TRIM56-204ENST00000487252 DPP9Q86TI2 863 aa14.6□□□□□ -0.07
TRIM56-204ENST00000487252 TMEM199Q8N511 208 aa14.6□□□□□ -0.07
TRIM56-204ENST00000487252 GINM1Q9NU53 330 aa14.6□□□□□ -0.07
TRIM56-204ENST00000487252 C9orf78Q9NZ63 289 aaPredicted RBP14.6□□□□□ -0.07
TRIM56-204ENST00000487252 NRBP1Q9UHY1 535 aa14.6□□□□□ -0.07
TRIM56-204ENST00000487252 MROH7-TTC4A0A0A0MT08 1334 aa14.6□□□□□ -0.07
TRIM56-204ENST00000487252 TRIOO75962 3097 aa14.6□□□□□ -0.07
TRIM56-204ENST00000487252 APAF1O14727 1248 aa14.59□□□□□ -0.07
TRIM56-204ENST00000487252 COBLO75128 1261 aa14.59□□□□□ -0.07
TRIM56-204ENST00000487252 ALDH1L1O75891 902 aa14.59□□□□□ -0.07
TRIM56-204ENST00000487252 MAP4K4O95819 1239 aaPredicted RBP14.59□□□□□ -0.07
TRIM56-204ENST00000487252 CENPBP07199 599 aaPredicted RBP14.59□□□□□ -0.07
TRIM56-204ENST00000487252 ALADP13716 330 aa14.59□□□□□ -0.07
TRIM56-204ENST00000487252 CDK7P50613 346 aa14.59□□□□□ -0.07
TRIM56-204ENST00000487252 RALBP1Q15311 655 aa14.59□□□□□ -0.07
TRIM56-204ENST00000487252 METTL16Q86W50 562 aaKnown RBP14.59□□□□□ -0.07
TRIM56-204ENST00000487252 SLF2Q8IX21 1173 aa14.59□□□□□ -0.07
TRIM56-204ENST00000487252 ANKRD44Q8N8A2 993 aa14.59□□□□□ -0.07
TRIM56-204ENST00000487252 UIMC1Q96RL1 719 aa14.59□□□□□ -0.07
TRIM56-204ENST00000487252 TSEN34Q9BSV6 310 aaKnown RBP14.59□□□□□ -0.07
TRIM56-204ENST00000487252 IL23AQ9NPF7 189 aa14.59□□□□□ -0.07
TRIM56-204ENST00000487252 DENND2AQ9ULE3 1009 aa14.59□□□□□ -0.07
TRIM56-204ENST00000487252 PCDHA11Q9Y5I1 949 aa14.59□□□□□ -0.07
TRIM56-204ENST00000487252 DCHS1Q96JQ0 3298 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms