RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 ZNF280AP59817 542 aaPredicted RBP7.15□□□□□ -1.26
VAMP3-203ENST00000487194 KRT85P78386 507 aa7.15□□□□□ -1.26
VAMP3-203ENST00000487194 SPDYE2Q495Y8 402 aa7.15□□□□□ -1.26
VAMP3-203ENST00000487194 RCSD1Q6JBY9 416 aa7.15□□□□□ -1.26
VAMP3-203ENST00000487194 BRAPQ7Z569 592 aa7.15□□□□□ -1.26
VAMP3-203ENST00000487194 METTL16Q86W50 562 aaKnown RBP7.15□□□□□ -1.26
VAMP3-203ENST00000487194 TMEM87AQ8NBN3 555 aa7.15□□□□□ -1.26
VAMP3-203ENST00000487194 PNMA1Q8ND90 353 aa7.15□□□□□ -1.26
VAMP3-203ENST00000487194 FBXO18Q8NFZ0 1043 aa7.15□□□□□ -1.26
VAMP3-203ENST00000487194 FAM151AQ8WW52 585 aa7.15□□□□□ -1.26
VAMP3-203ENST00000487194 DPF2Q92785 391 aa7.15□□□□□ -1.26
VAMP3-203ENST00000487194 LZTS2Q9BRK4 669 aa7.15□□□□□ -1.26
VAMP3-203ENST00000487194 ALG1Q9BT22 464 aa7.15□□□□□ -1.26
VAMP3-203ENST00000487194 SLC26A6Q9BXS9 759 aa7.15□□□□□ -1.26
VAMP3-203ENST00000487194 SCAND2PQ9GZW5 306 aaPredicted RBP7.15□□□□□ -1.26
VAMP3-203ENST00000487194 IL17RBQ9NRM6 502 aa7.15□□□□□ -1.26
VAMP3-203ENST00000487194 LMBRD1Q9NUN5 540 aa7.15□□□□□ -1.26
VAMP3-203ENST00000487194 ZNF70Q9UC06 446 aaPredicted RBP7.15□□□□□ -1.26
VAMP3-203ENST00000487194 CFAP45Q9UL16 551 aa7.15□□□□□ -1.26
VAMP3-203ENST00000487194 STX8Q9UNK0 236 aa7.15□□□□□ -1.26
VAMP3-203ENST00000487194 ZBTB12Q9Y330 459 aaPredicted RBP7.15□□□□□ -1.26
VAMP3-203ENST00000487194 PRPF3O43395 683 aaKnown RBP7.14□□□□□ -1.27
VAMP3-203ENST00000487194 TTLL1O95922 423 aa7.14□□□□□ -1.27
VAMP3-203ENST00000487194 LMNB1P20700 586 aa7.14□□□□□ -1.27
VAMP3-203ENST00000487194 SMARCA1P28370 1054 aa7.14□□□□□ -1.27
VAMP3-203ENST00000487194 SHMT1P34896 483 aa7.14□□□□□ -1.27
VAMP3-203ENST00000487194 TNNI2P48788 182 aa7.14□□□□□ -1.27
VAMP3-203ENST00000487194 CACNB3P54284 484 aa7.14□□□□□ -1.27
VAMP3-203ENST00000487194 RASSF7Q02833 373 aa7.14□□□□□ -1.27
VAMP3-203ENST00000487194 TCP10Q12799 353 aa7.14□□□□□ -1.27
VAMP3-203ENST00000487194 RESTQ13127 1097 aa7.14□□□□□ -1.27
VAMP3-203ENST00000487194 GRM4Q14833 912 aa7.14□□□□□ -1.27
VAMP3-203ENST00000487194 SAFBQ15424 915 aaKnown RBP eCLIP7.14□□□□□ -1.27
VAMP3-203ENST00000487194 KLHL40Q2TBA0 621 aa7.14□□□□□ -1.27
VAMP3-203ENST00000487194 TATDN1Q6P1N9 297 aa7.14□□□□□ -1.27
VAMP3-203ENST00000487194 TMTC3Q6ZXV5 915 aa7.14□□□□□ -1.27
VAMP3-203ENST00000487194 NBPF11Q86T75 865 aa7.14□□□□□ -1.27
VAMP3-203ENST00000487194 FERMT3Q86UX7 667 aa7.14□□□□□ -1.27
VAMP3-203ENST00000487194 FAM83AQ86UY5 434 aa7.14□□□□□ -1.27
VAMP3-203ENST00000487194 ADAMTSL1Q8N6G6 1762 aa7.14□□□□□ -1.27
VAMP3-203ENST00000487194 PHKBQ93100 1093 aa7.14□□□□□ -1.27
VAMP3-203ENST00000487194 ZBED3Q96IU2 234 aaPredicted RBP7.14□□□□□ -1.27
VAMP3-203ENST00000487194 ZNF396Q96N95 335 aaPredicted RBP7.14□□□□□ -1.27
VAMP3-203ENST00000487194 TMEM47Q9BQJ4 181 aa7.14□□□□□ -1.27
VAMP3-203ENST00000487194 FHDC1Q9C0D6 1143 aaPredicted RBP7.14□□□□□ -1.27
VAMP3-203ENST00000487194 MYOZ2Q9NPC6 264 aa7.14□□□□□ -1.27
VAMP3-203ENST00000487194 MTMR4Q9NYA4 1195 aa7.14□□□□□ -1.27
VAMP3-203ENST00000487194 HERC5Q9UII4 1024 aaKnown RBP7.14□□□□□ -1.27
VAMP3-203ENST00000487194 PCDHAC2Q9Y5I4 1007 aa7.14□□□□□ -1.27
VAMP3-203ENST00000487194 DDX49Q9Y6V7 483 aaKnown RBP7.14□□□□□ -1.27
VAMP3-203ENST00000487194 ELP1O95163 1332 aa7.13□□□□□ -1.27
VAMP3-203ENST00000487194 IGKV6D-41A0A0C4DH26 115 aa7.13□□□□□ -1.27
VAMP3-203ENST00000487194 DDTLA6NHG4 134 aaPredicted RBP7.13□□□□□ -1.27
VAMP3-203ENST00000487194 H7C1D1 291 aa7.13□□□□□ -1.27
VAMP3-203ENST00000487194 DTNBO60941 627 aa7.13□□□□□ -1.27
VAMP3-203ENST00000487194 PPFIA3O75145 1194 aa7.13□□□□□ -1.27
VAMP3-203ENST00000487194 AKR1B1P15121 316 aa7.13□□□□□ -1.27
VAMP3-203ENST00000487194 UBE2HP62256 183 aa7.13□□□□□ -1.27
VAMP3-203ENST00000487194 DNM1Q05193 864 aaKnown RBP7.13□□□□□ -1.27
VAMP3-203ENST00000487194 GNL2Q13823 731 aaKnown RBP7.13□□□□□ -1.27
VAMP3-203ENST00000487194 TNFAIP1Q13829 316 aa7.13□□□□□ -1.27
VAMP3-203ENST00000487194 FOXD4L6Q3SYB3 417 aaPredicted RBP7.13□□□□□ -1.27
VAMP3-203ENST00000487194 CERKLQ49MI3 558 aaPredicted RBP7.13□□□□□ -1.27
VAMP3-203ENST00000487194 KRT40Q6A162 431 aa7.13□□□□□ -1.27
VAMP3-203ENST00000487194 FOXD4L3Q6VB84 417 aaPredicted RBP7.13□□□□□ -1.27
VAMP3-203ENST00000487194 ARHGAP27Q6ZUM4 889 aa7.13□□□□□ -1.27
VAMP3-203ENST00000487194 TMEM179Q6ZVK1 233 aa7.13□□□□□ -1.27
VAMP3-203ENST00000487194 SH3BP5LQ7L8J4 393 aa7.13□□□□□ -1.27
VAMP3-203ENST00000487194 USP48Q86UV5 1035 aa7.13□□□□□ -1.27
VAMP3-203ENST00000487194 ZFPM1Q8IX07 1006 aa7.13□□□□□ -1.27
VAMP3-203ENST00000487194 FAM177A1Q8N128 213 aaPredicted RBP7.13□□□□□ -1.27
VAMP3-203ENST00000487194 CEP95Q96GE4 821 aa7.13□□□□□ -1.27
VAMP3-203ENST00000487194 CSRNP1Q96S65 589 aa7.13□□□□□ -1.27
VAMP3-203ENST00000487194 CNPY2Q9Y2B0 182 aa7.13□□□□□ -1.27
VAMP3-203ENST00000487194 GJA3Q9Y6H8 435 aa7.13□□□□□ -1.27
VAMP3-203ENST00000487194 MYH8P13535 1937 aa7.13□□□□□ -1.27
VAMP3-203ENST00000487194 CNTNAP5Q8WYK1 1306 aa7.12□□□□□ -1.27
VAMP3-203ENST00000487194 CLRN2A0PK11 232 aa7.12□□□□□ -1.27
VAMP3-203ENST00000487194 PALM3A6NDB9 673 aaPredicted RBP7.12□□□□□ -1.27
VAMP3-203ENST00000487194 TCP10L2B9ZVM9 353 aa7.12□□□□□ -1.27
VAMP3-203ENST00000487194 MPHOSPH10O00566 681 aaKnown RBP7.12□□□□□ -1.27
VAMP3-203ENST00000487194 WNT10BO00744 389 aa7.12□□□□□ -1.27
VAMP3-203ENST00000487194 FIBPO43427 364 aa7.12□□□□□ -1.27
VAMP3-203ENST00000487194 TBC1D12O60347 775 aa7.12□□□□□ -1.27
VAMP3-203ENST00000487194 PLEKHA8P1O95397 391 aa7.12□□□□□ -1.27
VAMP3-203ENST00000487194 MMP1P03956 469 aa7.12□□□□□ -1.27
VAMP3-203ENST00000487194 PARP1P09874 1014 aaKnown RBP7.12□□□□□ -1.27
VAMP3-203ENST00000487194 GMPSP49915 693 aaPredicted RBP7.12□□□□□ -1.27
VAMP3-203ENST00000487194 FOSBP53539 338 aa7.12□□□□□ -1.27
VAMP3-203ENST00000487194 GUCY1B3Q02153 619 aa7.12□□□□□ -1.27
VAMP3-203ENST00000487194 KIF23Q02241 960 aaPredicted RBP7.12□□□□□ -1.27
VAMP3-203ENST00000487194 FUT2Q10981 343 aa7.12□□□□□ -1.27
VAMP3-203ENST00000487194 ASPRV1Q53RT3 343 aa7.12□□□□□ -1.27
VAMP3-203ENST00000487194 RBM26Q5T8P6 1007 aaKnown RBP7.12□□□□□ -1.27
VAMP3-203ENST00000487194 MICALL2Q8IY33 904 aa7.12□□□□□ -1.27
VAMP3-203ENST00000487194 GPC2Q8N158 579 aa7.12□□□□□ -1.27
VAMP3-203ENST00000487194 CCDC82Q8N4S0 544 aa7.12□□□□□ -1.27
VAMP3-203ENST00000487194 SRBD1Q8N5C6 995 aaKnown RBP7.12□□□□□ -1.27
VAMP3-203ENST00000487194 ZNF784Q8NCA9 323 aaPredicted RBP7.12□□□□□ -1.27
VAMP3-203ENST00000487194 MKL1Q969V6 931 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms