RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 SGSM2O43147 1006 aa17.37■□□□□ 0.37
LIMS3-205ENST00000487150 CDC45O75419 566 aa17.37■□□□□ 0.37
LIMS3-205ENST00000487150 RASA1P20936 1047 aa17.37■□□□□ 0.37
LIMS3-205ENST00000487150 SEPT2Q15019 361 aa17.37■□□□□ 0.37
LIMS3-205ENST00000487150 PTPN18Q99952 460 aa17.37■□□□□ 0.37
LIMS3-205ENST00000487150 PDHXO00330 501 aa17.36■□□□□ 0.37
LIMS3-205ENST00000487150 ORC4O43929 436 aa17.36■□□□□ 0.37
LIMS3-205ENST00000487150 TSPY3P0CV98 308 aa17.36■□□□□ 0.37
LIMS3-205ENST00000487150 TSPY8P0CW00 308 aa17.36■□□□□ 0.37
LIMS3-205ENST00000487150 AKR1B1P15121 316 aa17.36■□□□□ 0.37
LIMS3-205ENST00000487150 HMGCS2P54868 508 aa17.36■□□□□ 0.37
LIMS3-205ENST00000487150 FAM43AQ8N2R8 423 aa17.36■□□□□ 0.37
LIMS3-205ENST00000487150 GTF3C2Q8WUA4 911 aaPredicted RBP17.36■□□□□ 0.37
LIMS3-205ENST00000487150 LPAR1Q92633 364 aa17.36■□□□□ 0.37
LIMS3-205ENST00000487150 C12orf42Q96LP6 360 aa17.36■□□□□ 0.37
LIMS3-205ENST00000487150 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.36■□□□□ 0.37
LIMS3-205ENST00000487150 U3KPZ7 1027 aaPredicted RBP17.36■□□□□ 0.37
LIMS3-205ENST00000487150 OSBPP22059 807 aa17.35■□□□□ 0.37
LIMS3-205ENST00000487150 LBX1P52954 281 aa17.35■□□□□ 0.37
LIMS3-205ENST00000487150 EVX2Q03828 476 aa17.35■□□□□ 0.37
LIMS3-205ENST00000487150 CRHR2Q13324 411 aa17.35■□□□□ 0.37
LIMS3-205ENST00000487150 MOGSQ13724 837 aa17.35■□□□□ 0.37
LIMS3-205ENST00000487150 ARHGEF6Q15052 776 aa17.35■□□□□ 0.37
LIMS3-205ENST00000487150 CCDC84Q86UT8 332 aaPredicted RBP17.35■□□□□ 0.37
LIMS3-205ENST00000487150 SMCR8Q8TEV9 937 aaPredicted RBP17.35■□□□□ 0.37
LIMS3-205ENST00000487150 STAG1Q8WVM7 1258 aa17.35■□□□□ 0.37
LIMS3-205ENST00000487150 TSPY2A6NKD2 308 aa17.34■□□□□ 0.37
LIMS3-205ENST00000487150 TLR2O60603 784 aa17.34■□□□□ 0.37
LIMS3-205ENST00000487150 IRX3P78415 501 aaPredicted RBP17.34■□□□□ 0.37
LIMS3-205ENST00000487150 JAG1P78504 1218 aa17.34■□□□□ 0.37
LIMS3-205ENST00000487150 MFSD6Q6ZSS7 791 aa17.34■□□□□ 0.37
LIMS3-205ENST00000487150 CNNM2Q9H8M5 875 aa17.34■□□□□ 0.37
LIMS3-205ENST00000487150 GOPCQ9HD26 462 aa17.34■□□□□ 0.37
LIMS3-205ENST00000487150 TOMM22Q9NS69 142 aa17.34■□□□□ 0.37
LIMS3-205ENST00000487150 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.34■□□□□ 0.37
LIMS3-205ENST00000487150 GPR25O00155 361 aa17.33■□□□□ 0.36
LIMS3-205ENST00000487150 FKTNO75072 461 aa17.33■□□□□ 0.36
LIMS3-205ENST00000487150 TBC1D8O95759 1140 aa17.33■□□□□ 0.36
LIMS3-205ENST00000487150 FGRP09769 529 aa17.33■□□□□ 0.36
LIMS3-205ENST00000487150 HOXA7P31268 230 aaPredicted RBP17.33■□□□□ 0.36
LIMS3-205ENST00000487150 GUCY1A2P33402 732 aa17.33■□□□□ 0.36
LIMS3-205ENST00000487150 SHROOM1Q2M3G4 852 aaPredicted RBP17.33■□□□□ 0.36
LIMS3-205ENST00000487150 AKNAD1Q5T1N1 836 aa17.33■□□□□ 0.36
LIMS3-205ENST00000487150 GPAT2Q6NUI2 795 aa17.33■□□□□ 0.36
LIMS3-205ENST00000487150 STK11IPQ8N1F8 1099 aa17.33■□□□□ 0.36
LIMS3-205ENST00000487150 NEDD1Q8NHV4 660 aa17.33■□□□□ 0.36
LIMS3-205ENST00000487150 ESR2Q92731 530 aa17.33■□□□□ 0.36
LIMS3-205ENST00000487150 ESYT1Q9BSJ8 1104 aa17.33■□□□□ 0.36
LIMS3-205ENST00000487150 NYAP2Q9P242 653 aa17.33■□□□□ 0.36
LIMS3-205ENST00000487150 TMX2Q9Y320 296 aa17.33■□□□□ 0.36
LIMS3-205ENST00000487150 BAZ2AQ9UIF9 1905 aaKnown RBP17.33■□□□□ 0.36
LIMS3-205ENST00000487150 EIF5BO60841 1220 aaKnown RBP17.32■□□□□ 0.36
LIMS3-205ENST00000487150 PRDM1O75626 825 aa17.32■□□□□ 0.36
LIMS3-205ENST00000487150 TTLL1O95922 423 aa17.32■□□□□ 0.36
LIMS3-205ENST00000487150 GCLCP48506 637 aaPredicted RBP17.32■□□□□ 0.36
LIMS3-205ENST00000487150 CTDSPL2Q05D32 466 aa17.32■□□□□ 0.36
LIMS3-205ENST00000487150 CCDC178Q5BJE1 867 aa17.32■□□□□ 0.36
LIMS3-205ENST00000487150 ERO1AQ96HE7 468 aa17.32■□□□□ 0.36
LIMS3-205ENST00000487150 TSKSQ9UJT2 592 aa17.32■□□□□ 0.36
LIMS3-205ENST00000487150 SMIM22K7EJ46 135 aa17.31■□□□□ 0.36
LIMS3-205ENST00000487150 RANBP6O60518 1105 aaKnown RBP17.31■□□□□ 0.36
LIMS3-205ENST00000487150 HAND2P61296 217 aa17.31■□□□□ 0.36
LIMS3-205ENST00000487150 TFAP4Q01664 338 aa17.31■□□□□ 0.36
LIMS3-205ENST00000487150 ATP2B2Q01814 1243 aa17.31■□□□□ 0.36
LIMS3-205ENST00000487150 TRDNQ13061 729 aa17.31■□□□□ 0.36
LIMS3-205ENST00000487150 KIF22Q14807 665 aa17.31■□□□□ 0.36
LIMS3-205ENST00000487150 KRT23Q9C075 422 aa17.31■□□□□ 0.36
LIMS3-205ENST00000487150 VCPKMTQ9H867 229 aa17.31■□□□□ 0.36
LIMS3-205ENST00000487150 ATAD5Q96QE3 1844 aa17.31■□□□□ 0.36
LIMS3-205ENST00000487150 USP17L15C9J2P7 530 aa17.3■□□□□ 0.36
LIMS3-205ENST00000487150 USP17L13C9JLJ4 530 aa17.3■□□□□ 0.36
LIMS3-205ENST00000487150 USP17L11C9JVI0 530 aa17.3■□□□□ 0.36
LIMS3-205ENST00000487150 USP17L18D6R9N7 530 aa17.3■□□□□ 0.36
LIMS3-205ENST00000487150 USP17L22D6RA61 530 aa17.3■□□□□ 0.36
LIMS3-205ENST00000487150 USP17L17D6RBQ6 530 aa17.3■□□□□ 0.36
LIMS3-205ENST00000487150 USP17L19D6RCP7 530 aa17.3■□□□□ 0.36
LIMS3-205ENST00000487150 USP17L20D6RJB6 530 aa17.3■□□□□ 0.36
LIMS3-205ENST00000487150 EEF2P13639 858 aaKnown RBP17.3■□□□□ 0.36
LIMS3-205ENST00000487150 VCAM1P19320 739 aa17.3■□□□□ 0.36
LIMS3-205ENST00000487150 SP3Q02447 781 aa17.3■□□□□ 0.36
LIMS3-205ENST00000487150 USP17L24Q0WX57 530 aa17.3■□□□□ 0.36
LIMS3-205ENST00000487150 ZYXQ15942 572 aaKnown RBP17.3■□□□□ 0.36
LIMS3-205ENST00000487150 TREML2Q5T2D2 321 aa17.3■□□□□ 0.36
LIMS3-205ENST00000487150 SKAP1Q86WV1 359 aa17.3■□□□□ 0.36
LIMS3-205ENST00000487150 IQCA1Q86XH1 822 aa17.3■□□□□ 0.36
LIMS3-205ENST00000487150 ACER1Q8TDN7 264 aa17.3■□□□□ 0.36
LIMS3-205ENST00000487150 ZNF296Q8WUU4 475 aaPredicted RBP17.3■□□□□ 0.36
LIMS3-205ENST00000487150 ANO2Q9NQ90 1003 aa17.3■□□□□ 0.36
LIMS3-205ENST00000487150 EMILIN3Q9NT22 766 aa17.3■□□□□ 0.36
LIMS3-205ENST00000487150 MTMR4Q9NYA4 1195 aa17.3■□□□□ 0.36
LIMS3-205ENST00000487150 IGKV6D-41A0A0C4DH26 115 aa17.29■□□□□ 0.36
LIMS3-205ENST00000487150 WDR46O15213 610 aaKnown RBP17.29■□□□□ 0.36
LIMS3-205ENST00000487150 REC8O95072 547 aa17.29■□□□□ 0.36
LIMS3-205ENST00000487150 RRP12Q5JTH9 1297 aaKnown RBP17.29■□□□□ 0.36
LIMS3-205ENST00000487150 RNF20Q5VTR2 975 aa17.29■□□□□ 0.36
LIMS3-205ENST00000487150 TBC1D10CQ8IV04 446 aa17.29■□□□□ 0.36
LIMS3-205ENST00000487150 MAP4K1Q92918 833 aa17.29■□□□□ 0.36
LIMS3-205ENST00000487150 CEP95Q96GE4 821 aa17.29■□□□□ 0.36
LIMS3-205ENST00000487150 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.29■□□□□ 0.36
LIMS3-205ENST00000487150 ASCC2Q9H1I8 757 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms