RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 PPARAQ07869 468 aa14.03□□□□□ -0.16
HSPG2-211ENST00000486901 SHISA4Q96DD7 197 aa14.03□□□□□ -0.16
HSPG2-211ENST00000486901 ABCC6O95255 1503 aa14.03□□□□□ -0.16
HSPG2-211ENST00000486901 MED1Q15648 1581 aaPredicted RBP14.03□□□□□ -0.16
HSPG2-211ENST00000486901 PLEKHA8P1O95397 391 aa14.03□□□□□ -0.16
HSPG2-211ENST00000486901 PLCD1P51178 756 aa14.03□□□□□ -0.16
HSPG2-211ENST00000486901 CYP27A1Q02318 531 aa14.03□□□□□ -0.16
HSPG2-211ENST00000486901 SRLQ86TD4 932 aa14.03□□□□□ -0.16
HSPG2-211ENST00000486901 SLIT1O75093 1534 aa14.03□□□□□ -0.16
HSPG2-211ENST00000486901 BCAMP50895 628 aa14.02□□□□□ -0.16
HSPG2-211ENST00000486901 SART3Q15020 963 aaKnown RBP14.02□□□□□ -0.16
HSPG2-211ENST00000486901 CAGE1Q8TC20 777 aa14.02□□□□□ -0.16
HSPG2-211ENST00000486901 RASGRP4Q8TDF6 673 aa14.02□□□□□ -0.16
HSPG2-211ENST00000486901 SMCR8Q8TEV9 937 aaPredicted RBP14.02□□□□□ -0.16
HSPG2-211ENST00000486901 STRBPQ96SI9 672 aaKnown RBP14.02□□□□□ -0.16
HSPG2-211ENST00000486901 ERICH2A1L162 156 aa14.02□□□□□ -0.17
HSPG2-211ENST00000486901 NMT2O60551 498 aa14.02□□□□□ -0.17
HSPG2-211ENST00000486901 MFAP3LO75121 409 aa14.02□□□□□ -0.17
HSPG2-211ENST00000486901 UBXN1Q04323 297 aa14.02□□□□□ -0.17
HSPG2-211ENST00000486901 TTLL11Q8NHH1 800 aa14.02□□□□□ -0.17
HSPG2-211ENST00000486901 PAGE5Q96GU1 130 aa14.02□□□□□ -0.17
HSPG2-211ENST00000486901 NFAT5O94916 1531 aa14.02□□□□□ -0.17
HSPG2-211ENST00000486901 KLK7P49862 253 aa14.02□□□□□ -0.17
HSPG2-211ENST00000486901 CUL4BQ13620 913 aa14.02□□□□□ -0.17
HSPG2-211ENST00000486901 KRT31Q15323 416 aa14.02□□□□□ -0.17
HSPG2-211ENST00000486901 FILIP1LQ4L180 1135 aa14.02□□□□□ -0.17
HSPG2-211ENST00000486901 UBAC1Q9BSL1 405 aa14.02□□□□□ -0.17
HSPG2-211ENST00000486901 UBXN6Q9BZV1 441 aa14.02□□□□□ -0.17
HSPG2-211ENST00000486901 CPDO75976 1380 aa14.02□□□□□ -0.17
HSPG2-211ENST00000486901 PP2D1A8MPX8 630 aa14.01□□□□□ -0.17
HSPG2-211ENST00000486901 MMS19Q96T76 1030 aa14.01□□□□□ -0.17
HSPG2-211ENST00000486901 NAPGQ99747 312 aaPredicted RBP14.01□□□□□ -0.17
HSPG2-211ENST00000486901 L1RE1Q9UN81 338 aa14.01□□□□□ -0.17
HSPG2-211ENST00000486901 A0A1B0GTH6 734 aa14.01□□□□□ -0.17
HSPG2-211ENST00000486901 CXCR5P32302 372 aa14.01□□□□□ -0.17
HSPG2-211ENST00000486901 GOLGA5Q8TBA6 731 aa14.01□□□□□ -0.17
HSPG2-211ENST00000486901 CWC15Q9P013 229 aaKnown RBP14.01□□□□□ -0.17
HSPG2-211ENST00000486901 LRP2BPQ9P2M1 347 aa14.01□□□□□ -0.17
HSPG2-211ENST00000486901 GOLGA6L9A6NEM1 432 aa14.01□□□□□ -0.17
HSPG2-211ENST00000486901 TRIM75PA6NK02 468 aa14.01□□□□□ -0.17
HSPG2-211ENST00000486901 ATP1A1P05023 1023 aaKnown RBP14.01□□□□□ -0.17
HSPG2-211ENST00000486901 UIMC1Q96RL1 719 aa14.01□□□□□ -0.17
HSPG2-211ENST00000486901 GNL3LQ9NVN8 582 aaKnown RBP14.01□□□□□ -0.17
HSPG2-211ENST00000486901 EHD2Q9NZN4 543 aa14.01□□□□□ -0.17
HSPG2-211ENST00000486901 ADD3Q9UEY8 706 aaKnown RBP14.01□□□□□ -0.17
HSPG2-211ENST00000486901 RNF40O75150 1001 aa14□□□□□ -0.17
HSPG2-211ENST00000486901 ERLIN1O75477 346 aa14□□□□□ -0.17
HSPG2-211ENST00000486901 FMNL1O95466 1100 aaPredicted RBP14□□□□□ -0.17
HSPG2-211ENST00000486901 MYBL2P10244 700 aa14□□□□□ -0.17
HSPG2-211ENST00000486901 PIK3AP1Q6ZUJ8 805 aa14□□□□□ -0.17
HSPG2-211ENST00000486901 ANKRD13CQ8N6S4 541 aa14□□□□□ -0.17
HSPG2-211ENST00000486901 GPR108Q9NPR9 543 aa14□□□□□ -0.17
HSPG2-211ENST00000486901 EIF4ENIF1Q9NRA8 985 aaKnown RBP14□□□□□ -0.17
HSPG2-211ENST00000486901 SLC7A5Q01650 507 aa14□□□□□ -0.17
HSPG2-211ENST00000486901 PTGDRQ13258 359 aa14□□□□□ -0.17
HSPG2-211ENST00000486901 RASGRF1Q13972 1273 aa14□□□□□ -0.17
HSPG2-211ENST00000486901 APTXQ7Z2E3 356 aaKnown RBP14□□□□□ -0.17
HSPG2-211ENST00000486901 FCHSD1Q86WN1 690 aa14□□□□□ -0.17
HSPG2-211ENST00000486901 EXOC4Q96A65 974 aa14□□□□□ -0.17
HSPG2-211ENST00000486901 DACH1Q9UI36 760 aa14□□□□□ -0.17
HSPG2-211ENST00000486901 RFX7Q2KHR2 1363 aa14□□□□□ -0.17
HSPG2-211ENST00000486901 IRS4O14654 1257 aaPredicted RBP13.99□□□□□ -0.17
HSPG2-211ENST00000486901 PIP4K2BP78356 416 aa13.99□□□□□ -0.17
HSPG2-211ENST00000486901 BRD3Q15059 726 aa13.99□□□□□ -0.17
HSPG2-211ENST00000486901 EZH2Q15910 746 aaKnown RBP13.99□□□□□ -0.17
HSPG2-211ENST00000486901 SPATA1Q5VX52 437 aa13.99□□□□□ -0.17
HSPG2-211ENST00000486901 ZNF654Q8IZM8 581 aa13.99□□□□□ -0.17
HSPG2-211ENST00000486901 CEP112Q8N8E3 955 aa13.99□□□□□ -0.17
HSPG2-211ENST00000486901 FANCBQ8NB91 859 aa13.99□□□□□ -0.17
HSPG2-211ENST00000486901 JADE2Q9NQC1 790 aa13.99□□□□□ -0.17
HSPG2-211ENST00000486901 MYO6Q9UM54 1294 aa13.99□□□□□ -0.17
HSPG2-211ENST00000486901 MAP2K7O14733 419 aa13.99□□□□□ -0.17
HSPG2-211ENST00000486901 TUBB4AP04350 444 aa13.99□□□□□ -0.17
HSPG2-211ENST00000486901 C2orf54Q08AI8 447 aa13.99□□□□□ -0.17
HSPG2-211ENST00000486901 RILPL1Q5EBL4 403 aa13.99□□□□□ -0.17
HSPG2-211ENST00000486901 AKNAD1Q5T1N1 836 aa13.99□□□□□ -0.17
HSPG2-211ENST00000486901 PACS2Q86VP3 889 aa13.99□□□□□ -0.17
HSPG2-211ENST00000486901 CRACR2BQ8N4Y2 399 aaPredicted RBP13.99□□□□□ -0.17
HSPG2-211ENST00000486901 NKRFO15226 690 aaKnown RBP eCLIP13.99□□□□□ -0.17
HSPG2-211ENST00000486901 RNASE9P60153 205 aaKnown RBP13.99□□□□□ -0.17
HSPG2-211ENST00000486901 ENOX2Q16206 610 aaKnown RBP13.99□□□□□ -0.17
HSPG2-211ENST00000486901 PTPROQ16827 1216 aa13.99□□□□□ -0.17
HSPG2-211ENST00000486901 CCDC122Q5T0U0 273 aa13.99□□□□□ -0.17
HSPG2-211ENST00000486901 GOLGA6L1Q8N7Z2 621 aa13.99□□□□□ -0.17
HSPG2-211ENST00000486901 ANKRD18BA2A2Z9 1011 aa13.98□□□□□ -0.17
HSPG2-211ENST00000486901 GSG1L2A8MUP6 293 aa13.98□□□□□ -0.17
HSPG2-211ENST00000486901 EIF3CLB5ME19 914 aaKnown RBP13.98□□□□□ -0.17
HSPG2-211ENST00000486901 EIF3JO75822 258 aaKnown RBP13.98□□□□□ -0.17
HSPG2-211ENST00000486901 SARSP49591 514 aaKnown RBP13.98□□□□□ -0.17
HSPG2-211ENST00000486901 ATP2B2Q01814 1243 aa13.98□□□□□ -0.17
HSPG2-211ENST00000486901 SF3A3Q12874 501 aaKnown RBP eCLIP13.98□□□□□ -0.17
HSPG2-211ENST00000486901 FAM47AQ5JRC9 791 aa13.98□□□□□ -0.17
HSPG2-211ENST00000486901 LRRC31Q6UY01 552 aa13.98□□□□□ -0.17
HSPG2-211ENST00000486901 KIF6Q6ZMV9 814 aa13.98□□□□□ -0.17
HSPG2-211ENST00000486901 ZCRB1Q8TBF4 217 aaKnown RBP13.98□□□□□ -0.17
HSPG2-211ENST00000486901 EIF3CQ99613 913 aaKnown RBP13.98□□□□□ -0.17
HSPG2-211ENST00000486901 RIPOR2Q9Y4F9 1068 aa13.98□□□□□ -0.17
HSPG2-211ENST00000486901 SAMM50Q9Y512 469 aa13.98□□□□□ -0.17
HSPG2-211ENST00000486901 C5P01031 1676 aa13.98□□□□□ -0.17
HSPG2-211ENST00000486901 LIG3P49916 1009 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms